Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_001729.1 Length=4726 Score E Sequences producing significant alignments: (Bits) Value seq135 147 7e-32 >seq135 Length=518716 Score = 147 bits (162), Expect = 7e-32 Identities = 242/344 (70%), Gaps = 14/344 (4%) Strand=Plus/Minus Query 2878 TCCTCAGGAAATTGGCATTGCGATTCCCAATGGCTGGGCGACAGAGTCATCACCACCAG- 2936 |||||||||||||||||| | ||||| ||||| | || | || ||||||| | Sbjct 126290 TCCTCAGGAAATTGGCAT-GTGATTCTCAATGACAAGGGAATC---TCGTCACCACTCGT 126235 Query 2937 --CACCAGAACCTGGGCCCTGCCCACTTACAACAACCATCTCTACAAGCAAATCTCCAGC 2994 ||| ||||| |||| | ||| || ||||| ||||||||||||| || | || Sbjct 126234 TCCACGAGAACTTGGGTGTTCCCCTTCTATGACAACAATCTCTACAAGCAGAT-TAAAGG 126176 Query 2995 CAATCAGGAGCTTCAAACGACAACCACTACTTTGGCTACAGCACCCCTTGGGGGTATTTT 3054 | || || || || | |||||| || |||||||||||| ||| || | Sbjct 126175 CCAT-----GCCTCTGACATGTCCGCCTACTTGGGTTACAGCACCCCT-GGGCCTACCTC 126122 Query 3055 GACTTTAACAGATTCCACTGCCACTTCTCACCACGTGACTGGCAGCGACTCATTAACAAC 3114 ||||| ||||||||||| ||||||| || | ||||| ||||||||||| |||||| Sbjct 126121 GACTTCAACAGATTCCAGTGCCACTGGAGTCCCCAAGACTGTCAGCGACTCATCAACAAC 126062 Query 3115 AACTGGGGATTCCGGCCCAAGAAACTCAGCTTCAAGCTCTTCAACATCCAAGTTAGAGGG 3174 ||||||| |||| || ||| | || |||| | |||||||| ||||||| | | Sbjct 126061 TACTGGGGCATCCGACCAAAGGCTCGTAGAATCAAAATTTTCAACATACAAGTTAAGGAG 126002 Query 3175 GTCACGCAGAACGATGGCACGACGACTATTGCCAATAACCTTAC 3218 |||| | || | ||||| | ||| |||||||||||||| || Sbjct 126001 GTCATGGAGGCAGCAGGCACAAAGACAATTGCCAATAACCTAAC 125958 Score = 141 bits (156), Expect = 3e-30 Identities = 245/354 (69%), Gaps = 3/354 (1%) Strand=Plus/Minus Query 1303 CCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACATCGCGGAAGCCATCGCCC 1362 |||||||| ||| | || || || || | || || | ||||| ||| ||||| |||| Sbjct 127812 CCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCGTGGAGGCCATTGCCC 127753 Query 1363 ACGCCGTGCCCTTCTACGGCTGCGTAAACTGGACCAATGAGAACTTTCCCTTCAACGATT 1422 || ||||| || || ||||| | ||||||||| |||| ||||||||| ||||| || | Sbjct 127752 GTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAACTTTCCTTTCAATGACT 127693 Query 1423 GCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGA 1482 | || || ||||||||||| ||||||||||| || |||||||| || | || ||| Sbjct 127692 GGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACCAGTAAAATTGTAGAGT 127633 Query 1483 GCGCCAAGGCCATTCTGGGCGG--AAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCATC 1540 || || |||||| |||| || || | | | | || || ||||| || || || Sbjct 127632 CTGCTAAAGCCATTTTGGGTGGGTCGGCCATGCG-GGGTTGATCAAAAATGTAAAGGTTC 127574 Query 1541 GGCCCAGATCGAACCCACTCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTGAT 1600 | || || ||||| || || || | | ||| || | | | | | | ||| | Sbjct 127573 TGTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATATATATACGGGTACTGTGGT 127514 Query 1601 TGACGGGAACAGCACCACCTTCGAGCATCAGCAGCCGCTGCAGGACCGGATGTT 1654 ||| ||||||||||| ||| | || ||| || | || || |||| | ||||| Sbjct 127513 TGATGGGAACAGCACTACCCTGGAACATAAGGAACCTTTGGAGGAAAGAATGTT 127460 Score = 140 bits (154), Expect = 1e-29 Identities = 193/268 (72%), Gaps = 4/268 (1%) Strand=Plus/Minus Query 4039 GACGTGTACCTTCAAGGACCTATCTGGGCAAAGATTCCTCACACGGATGGACACTTTCAT 4098 ||| | || || || || ||||| ||||| || |||| |||| ||||| | ||||| Sbjct 124940 GACATCTATCTCCAGGGCCCTATTTGGGCGAAAGCTCCTGACACTGATGGCAATTTTCAG 124881 Query 4099 CCTTCTCCTCTGATGGGAGGCTTTGGACTGAAACATCCGCCTCCTCAAATCATGATCAAA 4158 ||| |||| |||||||||| ||| |||||||| ||||| || || ||| Sbjct 124880 CCTCATCCTAACATGGGAGGCTCTGGGTGCAAACATCCACCTCCGATGATTCTGCAGAAA 124821 Query 4159 AATACTCCGGTACCGGCAAATCCTCCGACGACTTTCA--GCCCGGCCAAGTTTGCTTCAT 4216 |||||||| || || ||| | ||||| || | |||| | ||| | | | || | Sbjct 124820 AATACTCCAGTCCCTGCAGAACCTCCTGCGGCCTTCACTGAAACGCCTATTAAG--TCTT 124763 Query 4217 TTATCACTCAGTACTCCACTGGACAGGTCAGCGTGGAAATTGAGTGGGAGCTACAGAAAG 4276 |||| | |||||| |||||||| ||||| | ||||||||||| ||||||| | | || Sbjct 124762 TTATTAGTCAGTATTCCACTGGTCAGGTAACAGTGGAAATTGATTGGGAGCAAAAATCAG 124703 Query 4277 AAAACAGCAAACGTTGGAATCCAGAGAT 4304 || ||||||||| |||||||||||||| Sbjct 124702 AATCCAGCAAACGCTGGAATCCAGAGAT 124675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14971704148955