Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_001729.1
Length=4726
Score E
Sequences producing significant alignments: (Bits) Value
seq135 147 7e-32
>seq135
Length=518716
Score = 147 bits (162), Expect = 7e-32
Identities = 242/344 (70%), Gaps = 14/344 (4%)
Strand=Plus/Minus
Query 2878 TCCTCAGGAAATTGGCATTGCGATTCCCAATGGCTGGGCGACAGAGTCATCACCACCAG- 2936
|||||||||||||||||| | ||||| ||||| | || | || ||||||| |
Sbjct 126290 TCCTCAGGAAATTGGCAT-GTGATTCTCAATGACAAGGGAATC---TCGTCACCACTCGT 126235
Query 2937 --CACCAGAACCTGGGCCCTGCCCACTTACAACAACCATCTCTACAAGCAAATCTCCAGC 2994
||| ||||| |||| | ||| || ||||| ||||||||||||| || | ||
Sbjct 126234 TCCACGAGAACTTGGGTGTTCCCCTTCTATGACAACAATCTCTACAAGCAGAT-TAAAGG 126176
Query 2995 CAATCAGGAGCTTCAAACGACAACCACTACTTTGGCTACAGCACCCCTTGGGGGTATTTT 3054
| || || || || | |||||| || |||||||||||| ||| || |
Sbjct 126175 CCAT-----GCCTCTGACATGTCCGCCTACTTGGGTTACAGCACCCCT-GGGCCTACCTC 126122
Query 3055 GACTTTAACAGATTCCACTGCCACTTCTCACCACGTGACTGGCAGCGACTCATTAACAAC 3114
||||| ||||||||||| ||||||| || | ||||| ||||||||||| ||||||
Sbjct 126121 GACTTCAACAGATTCCAGTGCCACTGGAGTCCCCAAGACTGTCAGCGACTCATCAACAAC 126062
Query 3115 AACTGGGGATTCCGGCCCAAGAAACTCAGCTTCAAGCTCTTCAACATCCAAGTTAGAGGG 3174
||||||| |||| || ||| | || |||| | |||||||| ||||||| | |
Sbjct 126061 TACTGGGGCATCCGACCAAAGGCTCGTAGAATCAAAATTTTCAACATACAAGTTAAGGAG 126002
Query 3175 GTCACGCAGAACGATGGCACGACGACTATTGCCAATAACCTTAC 3218
|||| | || | ||||| | ||| |||||||||||||| ||
Sbjct 126001 GTCATGGAGGCAGCAGGCACAAAGACAATTGCCAATAACCTAAC 125958
Score = 141 bits (156), Expect = 3e-30
Identities = 245/354 (69%), Gaps = 3/354 (1%)
Strand=Plus/Minus
Query 1303 CCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACATCGCGGAAGCCATCGCCC 1362
|||||||| ||| | || || || || | || || | ||||| ||| ||||| ||||
Sbjct 127812 CCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCGTGGAGGCCATTGCCC 127753
Query 1363 ACGCCGTGCCCTTCTACGGCTGCGTAAACTGGACCAATGAGAACTTTCCCTTCAACGATT 1422
|| ||||| || || ||||| | ||||||||| |||| ||||||||| ||||| || |
Sbjct 127752 GTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAACTTTCCTTTCAATGACT 127693
Query 1423 GCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGA 1482
| || || ||||||||||| ||||||||||| || |||||||| || | || |||
Sbjct 127692 GGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACCAGTAAAATTGTAGAGT 127633
Query 1483 GCGCCAAGGCCATTCTGGGCGG--AAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCATC 1540
|| || |||||| |||| || || | | | | || || ||||| || || ||
Sbjct 127632 CTGCTAAAGCCATTTTGGGTGGGTCGGCCATGCG-GGGTTGATCAAAAATGTAAAGGTTC 127574
Query 1541 GGCCCAGATCGAACCCACTCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTGAT 1600
| || || ||||| || || || | | ||| || | | | | | | ||| |
Sbjct 127573 TGTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATATATATACGGGTACTGTGGT 127514
Query 1601 TGACGGGAACAGCACCACCTTCGAGCATCAGCAGCCGCTGCAGGACCGGATGTT 1654
||| ||||||||||| ||| | || ||| || | || || |||| | |||||
Sbjct 127513 TGATGGGAACAGCACTACCCTGGAACATAAGGAACCTTTGGAGGAAAGAATGTT 127460
Score = 140 bits (154), Expect = 1e-29
Identities = 193/268 (72%), Gaps = 4/268 (1%)
Strand=Plus/Minus
Query 4039 GACGTGTACCTTCAAGGACCTATCTGGGCAAAGATTCCTCACACGGATGGACACTTTCAT 4098
||| | || || || || ||||| ||||| || |||| |||| ||||| | |||||
Sbjct 124940 GACATCTATCTCCAGGGCCCTATTTGGGCGAAAGCTCCTGACACTGATGGCAATTTTCAG 124881
Query 4099 CCTTCTCCTCTGATGGGAGGCTTTGGACTGAAACATCCGCCTCCTCAAATCATGATCAAA 4158
||| |||| |||||||||| ||| |||||||| ||||| || || |||
Sbjct 124880 CCTCATCCTAACATGGGAGGCTCTGGGTGCAAACATCCACCTCCGATGATTCTGCAGAAA 124821
Query 4159 AATACTCCGGTACCGGCAAATCCTCCGACGACTTTCA--GCCCGGCCAAGTTTGCTTCAT 4216
|||||||| || || ||| | ||||| || | |||| | ||| | | | || |
Sbjct 124820 AATACTCCAGTCCCTGCAGAACCTCCTGCGGCCTTCACTGAAACGCCTATTAAG--TCTT 124763
Query 4217 TTATCACTCAGTACTCCACTGGACAGGTCAGCGTGGAAATTGAGTGGGAGCTACAGAAAG 4276
|||| | |||||| |||||||| ||||| | ||||||||||| ||||||| | | ||
Sbjct 124762 TTATTAGTCAGTATTCCACTGGTCAGGTAACAGTGGAAATTGATTGGGAGCAAAAATCAG 124703
Query 4277 AAAACAGCAAACGTTGGAATCCAGAGAT 4304
|| ||||||||| ||||||||||||||
Sbjct 124702 AATCCAGCAAACGCTGGAATCCAGAGAT 124675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14971704148955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |