Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq135 132 1e-27 >seq135 Length=518716 Score = 132 bits (146), Expect = 1e-27 Identities = 280/410 (68%), Gaps = 26/410 (6%) Strand=Plus/Minus Query 2970 CACCAGAACCTGGGTCTTGCCCACCTACAACAACCACCTCTACAAGC-GACTCGGAGAGA 3028 ||| ||||| ||||| || ||| ||| ||||| | |||||||||| || | | || Sbjct 126232 CACGAGAACTTGGGTGTTCCCCTTCTATGACAACAATCTCTACAAGCAGATT---AAAGG 126176 Query 3029 GCCTGCAGTCCAACA------CCTACAACGGATTCTCCACCCCCTGGGGATACTTTGACT 3082 | ||| || ||| ||||| || | | |||||| |||| ||| | |||| Sbjct 126175 CCATGCC-TCTGACATGTCCGCCTACTTGGGTTACAGCACCCC-TGGGCCTACCTCGACT 126118 Query 3083 TCAACCGCTTCCACTGCCACTTCTCACCACGTGACTGGCAGCGACTCATCAACAACAACT 3142 ||||| | ||||| ||||||| || | ||||| |||||||||||||||||| ||| Sbjct 126117 TCAACAGATTCCAGTGCCACTGGAGTCCCCAAGACTGTCAGCGACTCATCAACAACTACT 126058 Query 3143 GGGGCATGCGACCCAAAGCCATGCGGGTCAAAATCTTCAACATCCAGGTCAAGGAGGTCA 3202 ||||||| ||||| || || | ||||||| |||||||| || || |||||||||| Sbjct 126057 GGGGCATCCGACCAAAGGCTCGTAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTCA 125998 Query 3203 CGACGTCGAACGGC---GAGACAACGGTGGCTAATAACCTTACCAGCACGGTTCAGATCT 3259 | | | ||| |||||| | || |||||||| || || | ||||| | Sbjct 125997 TGGAGGCAGCAGGCACAAAGACAA---TTGCCAATAACCTAACGTCAACCATCCAGATTT 125941 Query 3260 TTGCGGACTCGTCGTACGAACTGCCGTACGTGATGG---ATGCGGGTCA-AGAGGGCAGC 3315 |||| || | ||| | ||||| |||||| | | |||| || ||||| || Sbjct 125940 TTGCAGATGACACATACCAGCTGCCATACGTGGTTGGAAATGC----CACCGAGGGGTGC 125885 Query 3316 CTGCCTCCTTTTCCCAACGACGTCTTTATGGTGCCCCAGTACGGCTACTG 3365 |||| |||||||| || || |||||| ||| |||||| | ||||| Sbjct 125884 TTGCCCGCTTTTCCCGGTGATGTTTTTATGTGGCCTCAGTACTGGTACTG 125835 Score = 131 bits (144), Expect = 5e-27 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1357 CCATCTGGCTCTTTGGGCCGGCCACGACGGGTAAAACCAACATCGCGGAAGCCATCGCCC 1416 |||||||| ||| | || || || || | || || | ||||| ||| ||||| |||| Sbjct 127812 CCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCGTGGAGGCCATTGCCC 127753 Query 1417 ACGCCGTGCCCTTCTACGGCTGCGTGAACTGGACCAATGAGAACTTTCCGTTCAACGATT 1476 || ||||| || || ||||| | |||||||| |||| ||||||||| ||||| || | Sbjct 127752 GTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAACTTTCCTTTCAATGACT 127693 Query 1477 GCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTAGAGA 1536 | || || ||||||||||| ||||||||||| || |||||||| || | |||||| Sbjct 127692 GGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACCAGTAAAATTGTAGAGT 127633 Query 1537 GCGCCAAGGCCATCCTGGGCGG 1558 || || ||||| |||| || Sbjct 127632 CTGCTAAAGCCATTTTGGGTGG 127611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15102558949660