Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq135 159 1e-35 >seq135 Length=518716 Score = 159 bits (176), Expect = 1e-35 Identities = 257/366 (70%), Gaps = 4/366 (1%) Strand=Plus/Minus Query 1310 AAGCGCAACA-CCATCTGGCTGTTTGGGCCGGCCACCACGGGCAAGACCAACATCGCGGA 1368 ||| ||||| |||||||| | | | || || ||||| ||||||| | ||||| ||| Sbjct 127823 AAGTGCAACCGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCGTGGA 127764 Query 1369 AGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCC 1428 ||||| |||| || ||||| || || ||||| | |||||||| |||| ||||||||| Sbjct 127763 GGCCATTGCCCGTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAACTTTCC 127704 Query 1429 CTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAA 1488 |||||||| || || || ||||||||||| ||||||||||| || |||||||| || Sbjct 127703 TTTCAATGACTGGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACCAGTAA 127644 Query 1489 GGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGG--CAGCAAGGTGCGCGTGGACCAAAAG 1546 | || ||||| || || |||||| | || || | || | | | | || || ||||| Sbjct 127643 AATTGTAGAGTCTGCTAAAGCCATTTTGGGTGGGTCGGCCATGCG-GGGTTGATCAAAAA 127585 Query 1547 TGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAACATG 1606 || || || | || || || || || || || | | ||| || | | | | Sbjct 127584 TGTAAAGGTTCTGTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATATATATACG 127525 Query 1607 TGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCAGCAGCCGTTGCAGGACCGG 1666 | | ||| |||| ||||||||||| ||| | || || || | || ||| |||| | Sbjct 127524 GGTACTGTGGTTGATGGGAACAGCACTACCCTGGAACATAAGGAACCTTTGGAGGAAAGA 127465 Query 1667 ATGTTC 1672 |||||| Sbjct 127464 ATGTTC 127459 Score = 114 bits (126), Expect = 4e-22 Identities = 121/158 (77%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 3038 CTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGATTTCAACAGATTCCACTGCCACTT 3097 |||||| || ||||||||||| |||| || | || |||||||||||||| ||||||| Sbjct 126154 CTACTTGGGTTACAGCACCCC-TGGGCCTACCTCGACTTCAACAGATTCCAGTGCCACTG 126096 Query 3098 TTCACCACGTGACTGGCAGCGACTCATCAACAACAATTGGGGATTCCGGCCCAAGAGACT 3157 || | ||||| |||||||||||||||||| | ||||| |||| || ||| | Sbjct 126095 GAGTCCCCAAGACTGTCAGCGACTCATCAACAACTACTGGGGCATCCGACCAAAGGCTCG 126036 Query 3158 CAACTTCAAACTCTTCAACATCCAAGTCAAGGAGGTCA 3195 | ||||| | |||||||| ||||| |||||||||| Sbjct 126035 TAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTCA 125998 Score = 98.7 bits (108), Expect = 3e-17 Identities = 183/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 4047 GATAGAGACGTGTACCTGCAGGGTCCCATTTGGGCCAAAATTCCTCACACAGATGGACAC 4106 |||| |||| | || || ||||| || |||||||| ||| |||| |||| ||||| | Sbjct 124946 GATAAAGACATCTATCTCCAGGGCCCTATTTGGGCGAAAGCTCCTGACACTGATGGCAAT 124887 Query 4107 TTTCACCCGTCTCCTCTTATGGGCGGCTTTGGACTCAAGAACCCGCCTCCTCAGATCCTC 4166 ||||| || |||| ||||| |||| ||| ||| | || ||||| ||| || Sbjct 124886 TTTCAGCCTCATCCTAACATGGGAGGCTCTGGGTGCAAACATCCACCTCCGATGATTCTG 124827 Query 4167 ATCAAAAACACGCCTGTTCCTGCGAATCCTCCGGCGGAGTTTTCAGCTACAAAGTTTGCT 4226 ||||| || || || ||||| | ||||| |||| || | | || || Sbjct 124826 CAGAAAAATACTCCAGTCCCTGCAGAACCTCCTGCGGCCTTCACTGAAACGCCTATTAAG 124767 Query 4227 TCATTCATCACCCAATACTCCACAGGACAAGTGAGTGTGGAAATTGAATGGGAGCTGCAG 4286 || || || | || || ||||| || || || | ||||||||||| ||||||| | Sbjct 124766 TCTTTTATTAGTCAGTATTCCACTGGTCAGGTAACAGTGGAAATTGATTGGGAGCAAAAA 124707 Query 4287 AAAGAAAACAGCAAGCGCTGGAATCCCGA 4315 |||| |||||| ||||||||||| || Sbjct 124706 TCAGAATCCAGCAAACGCTGGAATCCAGA 124678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14946171504915