Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_003287.2
Length=6407
Score E
Sequences producing significant alignments: (Bits) Value
seq219640 246 1e-61
seq224909 109 2e-20
seq43270 98.7 4e-17
seq234044 78.8 4e-11
>seq219640
Length=810
Score = 246 bits (272), Expect = 1e-61
Identities = 229/284 (81%), Gaps = 5/284 (2%)
Strand=Plus/Plus
Query 5574 GCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCT 5633
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GCTGCTTTCACTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCT 419
Query 5634 CTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCCCAAA 5693
||||||| ||| || |||| || || ||| ||||||| |||||||||| ||||||
Sbjct 420 CTAAATCCGGGACTAAATTTATGGCTCAAATTAAGTGCTTAACGGCACCTCAACCCCATG 479
Query 5694 AAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGTTTTTCGC 5753
|||| |||| |||||||||||||| |||||| |||||| || | | ||||||||||||
Sbjct 480 AAACAAGATTAGGGTGATGGTTCACCTAGTGGACCATCGACCAGGAAAACGGTTTTTCGC 539
Query 5754 CCTTTGACGTTGGAGTCCACGTTCTTTAATAGTGGACTCTTGTTCCAAACTGGAACAACA 5813
||||||| |||||| | | || ||| | |||| ||| | | ||||||||| |||
Sbjct 540 CCTTTGAAGTTGGAAT-GGTGATC-ATAACAATGGAATCTAG-TAAAAACTGGAAGAAC- 595
Query 5814 CTCAACCCTATCTCGGGCTATTCTTTTGATTTATAAGGGATTTT 5857
|||| ||| || |||| |||||| | ||| || ||||| |||
Sbjct 596 CTCATCCCCATATCGGTCTATTC-TAAGATATAGGAGGGAATTT 638
>seq224909
Length=887
Score = 109 bits (120), Expect = 2e-20
Identities = 167/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 5514 GCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCTACACTTGCCAGCGCCCTAGCGCCC 5573
|||| || |||| ||||||||| || || || |||| |||| |||| ||| || | ||
Sbjct 283 GCGGTGGTTGTGATGGTTACGCTCATCGCGAATGCTATACTTACCAGAGCCTTACGGTCC 342
Query 5574 GCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCT 5633
| | ||| || |||| | ||||||| |||||| || | || ||||||| ||| ||
Sbjct 343 ACGCAGTTCATTTCCTTCTGT-CCTTTCTAGCCACGGTCCCTGGTGTTCCCCGGCAAACT 401
Query 5634 CTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCCCAAA 5693
|||| | | ||| |||||||| ||| |||| |||| ||||| | ||| | | |||
Sbjct 402 CTAATTGGAGGG-TCCCTTTAAGGTAGAGATTGGGTGCATTACGAC-CCTACATCGCAAT 459
Query 5694 AAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGT 5746
|| |||| || ||| |||| |||| | ||| ||||||||||||| ||
Sbjct 460 AATTTTGAAGAAGGCGATAATTCAA-TAGTCGCCCAGCGCCCTGATAGACAGT 511
>seq43270
Length=6877
Score = 98.7 bits (108), Expect = 4e-17
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 5490 GCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCT 5549
|| ||||||||| |||| ||| || | |||||||||||| |||||| |||||| |
Sbjct 6607 GCTCCCTGTAGCTGCGCCTTATCCGTGTATCGTGTGGTGGTTAAGCGCAGAGTGACCCTT 6548
Query 5550 ACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACG 5609
||| |||| |||||||| | |||||| |||| ||||| ||| || ||| |||| |
Sbjct 6547 GCACATGCCGGCGCCCTAACTCCCGCTAATTTCACTTTCATCCATTTATTTTTCGCTTCT 6488
Query 5610 TTCGCCGGCTTT 5621
|||||| |||||
Sbjct 6487 TTCGCCAGCTTT 6476
>seq234044
Length=1176
Score = 78.8 bits (86), Expect = 4e-11
Identities = 114/157 (73%), Gaps = 3/157 (2%)
Strand=Plus/Plus
Query 5513 CGCGGCGGGTGTGGTGGTTACGC-GCAGCGTGACCGCTACACTTGCCAGCGCCCTAGCGC 5571
||||| || |||| |||||| | || | | |||||| ||||| |||| |||| |||
Sbjct 918 CGCGGAGGAGGTGGGGGTTACTCAGCGGGCAGCCCGCTAAACTTGGCAGCAACCTAACGC 977
Query 5572 CCGCTCCT-TTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAA 5630
||| |||| |||| |||| |||| |||||| | || |||| ||||||| ||||
Sbjct 978 CCGGTCCTGTTCGTTTTCATCCCAAAGGTTCTCGA-AGTTTTGCCGCCTTTCCCGGTCAG 1036
Query 5631 GCTCTAAATCGGGGGCTCCCTTTAGGGTTCCGATTTA 5667
| ||| | | | ||||||||||||| || |||||
Sbjct 1037 GGTCTTTAACCAGTGCTCCCTTTAGGGCTCTTATTTA 1073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 20332026808708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |