Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_004828.1
Length=4694
Score E
Sequences producing significant alignments: (Bits) Value
seq135 205 3e-49
>seq135
Length=518716
Score = 205 bits (226), Expect = 3e-49
Identities = 249/338 (74%), Gaps = 1/338 (0%)
Strand=Plus/Minus
Query 1244 GACATGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTCT 1303
||| |||||||||| ||||||| | ||||| |||||| ||||||| ||||||||| || |
Sbjct 127797 GACCTGCGACCACCAGCAAGACAAGCATCGTGGAGGCCATTGCCCGTGCTGTGCCATTTT 127738
Query 1304 ATGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAAATGA 1363
|||| || | |||||||| || | ||||||||| ||||| ||||| || || || |||
Sbjct 127737 ATGGCTGTGGAAACTGGACTAATGGGAACTTTCCTTTCAATGACTGGGTAGATAAGATGG 127678
Query 1364 TTATCTGGTGGGAGGAGGGCAAAATGACCGCCAAAGTGGTGGAAACAGCCAAGGCGATTC 1423
| || ||||||||||| || || |||||| ||| | || || | || || || |||
Sbjct 127677 TGATTTGGTGGGAGGAAGGAAAGATGACCAGTAAAATTGTAGAGTCTGCTAAAGCCATTT 127618
Query 1424 TGGGAGGATCTCGGGTG-AGAGTGGACCAAAAATGCAAAGCTTCGGTTCCGATCGAACCG 1482
|||| || || || | || || |||||||| |||| ||| || | || |||||
Sbjct 127617 TGGGTGGGTCGGCCATGCGGGGTTGATCAAAAATGTAAAGGTTCTGTGCAAATTGAACCA 127558
Query 1483 ACGCCGGTCATTATTACCAGTAACACCAACATGTGTTATGTCATCGACGGGAACACGACC 1542
||||| || ||||||||||||| | | | | || ||| | || ||||||| ||
Sbjct 127557 ACGCCTGTACTTATTACCAGTAATATATATACGGGTACTGTGGTTGATGGGAACAGCACT 127498
Query 1543 ACGTTCGAGCATAAGCAGCCGTTGGAGGACAGGATGTT 1580
|| | || |||||| | || |||||||| || |||||
Sbjct 127497 ACCCTGGAACATAAGGAACCTTTGGAGGAAAGAATGTT 127460
Score = 118 bits (130), Expect = 3e-23
Identities = 308/468 (66%), Gaps = 10/468 (2%)
Strand=Plus/Minus
Query 2937 TCCTCCGGAAATTGGCATTGCGATTCCCAATGGCTGGAAAACGGAGTCGTCACTCGAACC 2996
||||| |||||||||||| | ||||| ||||| | | || ||| |||||| ||
Sbjct 126290 TCCTCAGGAAATTGGCAT-GTGATTCTCAATGACAAGGGAATCTCGTCACCACTCGTTCC 126232
Query 2997 ACCCGAACCTGGGTCTTGCCCAGCTACAACAACCACCTGTACAAACGAATCCAAGGACCC 3056
|| |||| ||||| || ||| ||| ||||| | || ||||| | || |||| ||
Sbjct 126231 ACGAGAACTTGGGTGTTCCCCTTCTATGACAACAATCTCTACAAGCAGATTAAAGG--CC 126174
Query 3057 AGCGGAGGCNNNNNNNNNNNNNNATTCTTTGGATTCAGCACCCCCTGGGGATACTTTGAC 3116
| | | | ||| || | ||||||||| |||| ||| | |||
Sbjct 126173 AT----GCCTCTGACATGTCCGCCTACTTGGGTTACAGCACCCC-TGGGCCTACCTCGAC 126119
Query 3117 TACAATCGATTCCACTGCCACTTTTCCCCGCGAGACTGGCAACGACTCATCAACAACAAC 3176
| ||| ||||||| ||||||| || | |||||| || ||||||||||||||| ||
Sbjct 126118 TTCAACAGATTCCAGTGCCACTGGAGTCCCCAAGACTGTCAGCGACTCATCAACAACTAC 126059
Query 3177 TGGGGCATCCGTCCCAAAGCGATGCGCTTTAGACTCTTTAACATCCAGGTTAAAGAGGTC 3236
||||||||||| || || || | | | | | || ||||| || ||||| ||||||
Sbjct 126058 TGGGGCATCCGACCAAAGGCTCGTAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTC 125999
Query 3237 ACGGTCCAAGACTTCAACACCACCATCGGCAACAACCTCACCAGTACGGTCCAGGTCTTT 3296
| || || || | || || | ||| ||||| || || ||||| | |||
Sbjct 125998 ATGGAGGCAGCAGGCACAAAGACAATTGCCAATAACCTAACGTCAACCATCCAGATTTTT 125939
Query 3297 GCGGACAAGGACTACCAACTGCCGTACGTCCTCGGATCGGCTACCGAAGGCACCTT-CCC 3355
|| || | ||||| ||||| ||||| | ||| || ||||| || ||| |||
Sbjct 125938 GCAGATGACACATACCAGCTGCCATACGTGGTTGGAAATGCCACCGAGGGGTGCTTGCCC 125879
Query 3356 GCCGTTCCCAGCGGATATCTACACGATCCCGCAGTACGGGTACTGCAC 3403
|| ||||| | ||| | | | | || |||||| ||||||||||
Sbjct 125878 GCTTTTCCC-GGTGATGTTTTTATGTGGCCTCAGTACTGGTACTGCAC 125832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14869573572795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |