Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_005889.1
Length=4693
Score E
Sequences producing significant alignments: (Bits) Value
seq135 156 1e-34
>seq135
Length=518716
Score = 156 bits (172), Expect = 1e-34
Identities = 244/354 (69%), Gaps = 1/354 (0%)
Strand=Plus/Minus
Query 1341 CCGTCTGGCTGTATGGACCCGCGACCACCGGAAAGACCAACATCGCGGAAGCCATCTCTC 1400
|| ||||| | || |||| ||||||||| | ||||| | ||||| ||| ||||| | |
Sbjct 127812 CCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCGTGGAGGCCATTGCCC 127753
Query 1401 ACACCGTGCCCTTTTATGGCTGTGTGAACTGGACTAATGAGAACTTNNNNNNNNNNNNNN 1460
| ||||| ||||||||||||| ||||||||||||| ||||||
Sbjct 127752 GTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAACTTTCCTTTCAATGACT 127693
Query 1461 NNNNNGAAAAAATGTTGATCTGGTGGGAGGAGGGAAAGATGACCAGCAAGGTGGTGGAAC 1520
|| || ||| |||| ||||||||||| |||||||||||||| || | || ||
Sbjct 127692 GGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACCAGTAAAATTGTAGAGT 127633
Query 1521 CCGCCAAGGCCATCTTgggggggTCTAGAGTAC-GAGTGGATCAAAAATGTAAATCCTCT 1579
| || || ||||| ||||| ||||| | | | || ||||||||||||||| |||
Sbjct 127632 CTGCTAAAGCCATTTTGGGTGGGTCGGCCATGCGGGGTTGATCAAAAATGTAAAGGTTCT 127573
Query 1580 GTACAAGTAGACTCTACCCCGGTGATTATCACCTCCAATACTAACATGTGTGTGGTGGTG 1639
|| ||| | || | || || || |||| ||| |||| | | | || |||||
Sbjct 127572 GTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATATATATACGGGTACTGTGGTT 127513
Query 1640 GATGGGAACTCCACGACCTTTGAACACCAGCAGCCGCTGGAAGACCGCATGTTC 1693
||||||||| ||| ||| | ||||| || | || |||| || | ||||||
Sbjct 127512 GATGGGAACAGCACTACCCTGGAACATAAGGAACCTTTGGAGGAAAGAATGTTC 127459
Score = 120 bits (132), Expect = 9e-24
Identities = 219/310 (71%), Gaps = 12/310 (4%)
Strand=Plus/Minus
Query 3025 CCCCTGGGGATACTTTGACTTTAACCGCTTCCACTGCCACTTC--TCGCCAAGAGACTGG 3082
|||||||| ||| | ||||| ||| | ||||| ||||||| || |||||| |||
Sbjct 126137 CCCCTGGGCCTACCTCGACTTCAACAGATTCCAGTGCCACTGGAGTCCCCAAGA--CTGT 126080
Query 3083 CAAAGGCTCATCAACAACCACTGGGGACTGCGCCCCAAAAGCATGCA-AGTCCGCATCTT 3141
|| | |||||||||||| ||||||| | || ||||| || | | | || || ||
Sbjct 126079 CAGCGACTCATCAACAACTACTGGGGCATCCG-ACCAAAGGCTCGTAGAATCAAAATTTT 126021
Query 3142 CAACATCCAAGTTAAGGAGGTCACGACGTCTAACGGGGA-GACGACCGTATCCAACAACC 3200
|||||| |||||||||||||||| | | | | | || | | ||| | |||| ||||
Sbjct 126020 CAACATACAAGTTAAGGAGGTCATGGAGGC-AGCAGGCACAAAGACAATTGCCAATAACC 125962
Query 3201 TCACCAGCACGGTCCAGATCTTTGCGGACAGCACGTACGAGCTCCCGTACGT-GATGGAT 3259
| || || ||||||| ||||| || ||| ||| |||| || ||||| | ||||
Sbjct 125961 TAACGTCAACCATCCAGATTTTTGCAGATGACACATACCAGCTGCCATACGTGGTTGGA- 125903
Query 3260 GCAGGTCA-GGAGGGCAGCTTGCCTCCTTTCCCCAACGACGTGTTCATGGTGCCTCAGTA 3318
| | || ||||| ||||||| |||| ||| || || || ||| |||||||||
Sbjct 125902 -AATGCCACCGAGGGGTGCTTGCCCGCTTTTCCCGGTGATGTTTTTATGTGGCCTCAGTA 125844
Query 3319 CGGGTACTGC 3328
| ||||||||
Sbjct 125843 CTGGTACTGC 125834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14866381992290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |