Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq135 289 9e-75 >seq135 Length=518716 Score = 289 bits (320), Expect = 9e-75 Identities = 398/552 (72%), Gaps = 6/552 (1%) Strand=Plus/Minus Query 1345 AGCAGCACTTGAAAATGCCCGAGCAGAAATGCTACTAACAAAAACTGCCACAGACTATTT 1404 ||||||||| || || || ||||| |||||||| || ||||| | ||| || ||| | Sbjct 128007 AGCAGCACTGGAGAACGCGCGAGCCGAAATGCTCCTGACAAAGTCGGCCGAAGGCTACCT 127948 Query 1405 GATTGGAAAAGACCCAGTTCTGGACATTACTAAAAATCGGATCTATCAAATTCTGAAGTT 1464 | | || || ||||| |||||| || | || | | | |||| || | || | Sbjct 127947 GCTAGGCAAGCTTCCAGTCGGGGACATCACAAGGAACAAGGTGTTTCAACTTTTCCAGGT 127888 Query 1465 GAATAACTATAACCCTCAATATGTAGGGAGCGTCCTATGCGGATGGGTGAAAAGAGAATT 1524 |||| || |||| | | || || | ||||| |||| | || || Sbjct 127887 GAATCGGTACGACCCCGTCTTGGCAGCGAACATCCTAGTTCACTGGGCCCGGCGGGAGTT 127828 Query 1525 CAACAAAAGAAAT-GCCATATGGCTCTACGGACCTGCGACCACCGGAAAGACCAACATAG 1583 |||||| | || ||||| ||| ||||| |||||||||||||| | ||||| | ||| | Sbjct 127827 CAACAAGTGCAACCGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCG 127768 Query 1584 CCGAGGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACT 1643 ||||| ||||||| |||||| || || |||||||||| ||||||||||||| ||||| Sbjct 127767 TGGAGGCCATTGCCCGTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAACT 127708 Query 1644 TCCCATTTAATGACTGCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGACCA 1703 | || || |||||||| || ||||| ||| | || ||||||||||| ||||| ||||||| Sbjct 127707 TTCCTTTCAATGACTGGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACCA 127648 Query 1704 ATAAAGTAGTGGAATCCGCAAAAGCGATACTgggggggTCTGCTGTAC-GAGTTGATCAA 1762 |||| | || || || || ||||| || |||| ||||| || | | | ||||||||| Sbjct 127647 GTAAAATTGTAGAGTCTGCTAAAGCCATTTTGGGTGGGTCGGCCATGCGGGGTTGATCAA 127588 Query 1763 AAGTGTAAGGGGTCTGTTTGTATTGAACCTACTCCTGTAATAATTACCAGTAATACTGAT 1822 || ||||| || ||||| |||||||| || |||||| | ||||||||||||| || Sbjct 127587 AAATGTAAAGGTTCTGTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATATATAT 127528 Query 1823 ATGTGCATGATTGTGGATGGAAATTCTACTACAATGGAACACA--GAATTCCTTTGGAGG 1880 | | | | | || ||||| || ||||| ||||||| | ||| |||||||||| Sbjct 127527 ACGGGTACTGTGGTTGATGGGAACAGCACTACCCTGGAACATAAGGAA--CCTTTGGAGG 127470 Query 1881 AAAGAATGTTCC 1892 |||||||||||| Sbjct 127469 AAAGAATGTTCC 127458 Score = 156 bits (172), Expect = 1e-34 Identities = 293/423 (69%), Gaps = 12/423 (3%) Strand=Plus/Minus Query 3257 GGATACAGCACCCCCTGGGGGTACTTTGATTTCAACAGATTCCACTGCCATTTCTCTCCA 3316 || ||||||||||| |||| ||| | || |||||||||||||| ||||| | ||| Sbjct 126147 GGTTACAGCACCCC-TGGGCCTACCTCGACTTCAACAGATTCCAGTGCCACTGGAGTCCC 126089 Query 3317 AGAGACTGGCAGAGACTCATCAACAACCATTGGGGGATTAGACCGAAAGCACTCAAATTC 3376 |||||| ||| |||||||||||||| | ||||| || |||| || || | | | || Sbjct 126088 CAAGACTGTCAGCGACTCATCAACAACTACTGGGGCATCCGACCAAAGGCTCGTAGAATC 126029 Query 3377 AAGATATTCAATGTGCAAGTTAAAGAAGTCACGACGCAAGACCAG--ACAAAGACTATTG 3434 || || ||||| | |||||||| || |||| | | || ||| |||||||| |||| Sbjct 126028 AAAATTTTCAACATACAAGTTAAGGAGGTCATGGAGGCAG--CAGGCACAAAGACAATTG 125971 Query 3435 CTAACAACCTTACCTCTACAATCCAGATATTCACGGATAATGAACACCAGCTGCCCTATG 3494 | || ||||| || || || |||||||| || | ||| | | |||||||||| || | Sbjct 125970 CCAATAACCTAACGTCAACCATCCAGATTTTTGCAGATGACACATACCAGCTGCCATACG 125911 Query 3495 TTCTGGGCTCGGCCACGGAGGGGACGATGCCACCGTTCCCCTCAGATGTGTATGCCTTGC 3554 | | || ||||| |||||| |||| | || ||| ||||| | | | || Sbjct 125910 TGGTTGGAAATGCCACCGAGGGGTGCTTGCCCGCTTTTCCCGGTGATGTTTTTATGTGGC 125851 Query 3555 CCCAGTACGGCTACTGCACAATGCACACCA--ACCAGAGTGGAGCGAGATTC---AATGA 3609 | |||||| | |||||||| |||| | | | ||||| ||| | | || | | | Sbjct 125850 CTCAGTACTGGTACTGCACTGTGCATATGAAGAGCAGAG-GGAAC-ACATCCCCTACTCC 125793 Query 3610 CAGAAGTGCCTTCTATTGCTTAGAGTACTTCCCCAGTCAGATGCTGAGAACAGGGAATAA 3669 | || || |||||| |||| ||||| ||||||||| ||| | | || ||||| Sbjct 125792 ACGCTCAGCTTTTTATTGCCTAGAATACTTTTCCAGTCAGACGCTTCGCATTGGCAATAA 125733 Query 3670 TTT 3672 ||| Sbjct 125732 TTT 125730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16267485833985