Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_006148.1 Length=4432 Score E Sequences producing significant alignments: (Bits) Value seq135 123 7e-25 >seq135 Length=518716 Score = 123 bits (136), Expect = 7e-25 Identities = 188/268 (70%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 3813 ATAGAGACATTTACTTACAGGGGCCTATTTGGGCTAAAATTCCAAATACAGATGGACATT 3872 ||| |||||| || | ||||| ||||||||||| ||| ||| | || ||||| ||| Sbjct 124945 ATAAAGACATCTATCTCCAGGGCCCTATTTGGGCGAAAGCTCCTGACACTGATGGCAATT 124886 Query 3873 TTCATCCTTCTCCCAGAATGGGTGGTTTTGGATTAAAACATCCTCCGCCTATGATTCTGA 3932 |||| ||| ||| | ||||| || | ||| | |||||||| || || ||||||||| Sbjct 124885 TTCAGCCTCATCCTAACATGGGAGGCTCTGGGTGCAAACATCCACCTCCGATGATTCTGC 124826 Query 3933 TCAAAAATACACCAGTTCCTGCTGATCCTCCAACTACCTTCAATCCAATGCCACAGACTA 3992 |||||||| ||||| ||||| || ||||| | |||||| | || ||| | Sbjct 124825 AGAAAAATACTCCAGTCCCTGCAGAACCTCCTGCGGCCTTCACTGAAACGCCTATTAAGT 124766 Query 3993 GTTTCATTACTGAATACAGTACAGGACAAGTAACTGTTGAAATGTTGTGGGAGGTACAGA 4052 ||| |||| | | || || || || ||||| || ||||| |||||| | | Sbjct 124765 CTTTTATTAGTCAGTATTCCACTGGTCAGGTAACAGTGGAAATTGATTGGGAGCAAAAAT 124706 Query 4053 AAGAATCCTCCAAAAGATGGAATCCAGA 4080 ||||||| |||| | ||||||||||| Sbjct 124705 CAGAATCCAGCAAACGCTGGAATCCAGA 124678 Score = 102 bits (112), Expect = 2e-18 Identities = 198/286 (69%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 2831 CCCTGGGGGTACTTTGACTTCAATCGATTCCATTGCCACTTCTCCCCCCGAGACTGGCAA 2890 ||||||| ||| | |||||||| ||||||| ||||||| |||| |||||| || Sbjct 126136 CCCTGGGCCTACCTCGACTTCAACAGATTCCAGTGCCACTGGAGTCCCCAAGACTGTCAG 126077 Query 2891 AGACTCATCAACAACCACACAGGCATCAGGCCGAAAGGACTC--AAAATCAAAGTCTTTA 2948 |||||||||||||| || |||||| | || ||||| ||| | ||||||| | || | Sbjct 126076 CGACTCATCAACAACTACTGGGGCATCCGACC-AAAGG-CTCGTAGAATCAAAATTTTCA 126019 Query 2949 ACGTCCAAGTCAAAGAAGTTA-CAACACAAGATTCAACGAAAACAATTGCCAACAATCTC 3007 || | ||||| || || || | | || | | || || ||||||||||| || || Sbjct 126018 ACATACAAGTTAAGGAGGTCATGGAGGCAGCAGGC-ACAAAGACAATTGCCAATAACCTA 125960 Query 3008 ACCAGCACCGTACAGATCTTTGCGGACGAGAACTACGACTTACCATATGTATTAGGCAGT 3067 || ||| | ||||| ||||| || || | ||| | | ||||| || | || | | Sbjct 125959 ACGTCAACCATCCAGATTTTTGCAGATGACACATACCAGCTGCCATACGTGGTTGGAAAT 125900 Query 3068 GCTACACAAGGCACATTTCCTCCATTTCCCAATGATGTATTTATGT 3113 || || | || || || | |||||| |||||| ||||||| Sbjct 125899 GCCACCGAGGGGTGCTTGCCCGCTTTTCCCGGTGATGTTTTTATGT 125854 Score = 87.8 bits (96), Expect = 5e-14 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 1291 CCATCTGGCTGTATGGTCCAGCTACTACCGGCAAAACCATCATCGCTCAAGCTATTGCAC 1350 |||||||| | || | || || || ||| |||| || | ||||| | || ||||| | Sbjct 127812 CCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCGTGGAGGCCATTGCCC 127753 Query 1351 ATGCTGTTAAACTGTTTGCTGGTGTTAATTGGACTAATGAAAACTTTCCCTTCTGTAACT 1410 |||||| | | | || ||| || |||||||||| |||||||| ||| | ||| Sbjct 127752 GTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAACTTTCCTTTCAATGACT 127693 Query 1411 GTCCAGGGAAACTGCTTATCTGGTGGGAGGAGGGCAAGATGACAAACAAAATGGTGGAGA 1470 | || || || | || ||||||||||| || |||||||| | ||||| || ||| Sbjct 127692 GGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACCAGTAAAATTGTAGAGT 127633 Query 1471 CGGCTAAA 1478 | |||||| Sbjct 127632 CTGCTAAA 127625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14033379480485