Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq135 224 3e-55 >seq135 Length=518716 Score = 224 bits (248), Expect = 3e-55 Identities = 274/371 (74%), Gaps = 2/371 (1%) Strand=Plus/Minus Query 1316 TTCAACAAGAGGAACA-CCGTCTGGCTCTACGGACCCGCCACGACCGGCAAGACCAACAT 1374 ||||||||| | ||| || ||||| ||||| |||| || || ||| ||||||| | ||| Sbjct 127829 TTCAACAAGTGCAACCGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCAT 127770 Query 1375 CGCGGAGGCCATCGCCCACACTGTGCCCTTTTACGGCTGCGTGAACTGGACCAATGAAAA 1434 || ||||||||| |||| ||||||| ||||| ||||| | |||||||| |||| || Sbjct 127769 CGTGGAGGCCATTGCCCGTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAA 127710 Query 1435 CTTTCCCTTTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAGGAGGGAAAGATGAC 1494 |||||| || |||||||| || || || ||| | |||||||||||||| ||||||||||| Sbjct 127709 CTTTCCTTTCAATGACTGGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGAC 127650 Query 1495 CAACAAGGTGGTTGAATCCGCCAAGGCCATCCTGGGGGGCTCAAAGGTGC-GGGTCGATC 1553 || || | || || || || || ||||| |||| || || ||| |||| |||| Sbjct 127649 CAGTAAAATTGTAGAGTCTGCTAAAGCCATTTTGGGTGGGTCGGCCATGCGGGGTTGATC 127590 Query 1554 AGAAATGTAAATCCTCTGTTCAAATTGATTCTACCCCTGTCATTGTAACTTCCAATACAA 1613 | ||||||||| ||||| |||||||| | || ||||| || | || |||| | Sbjct 127589 AAAAATGTAAAGGTTCTGTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATATAT 127530 Query 1614 ACATGTGTGTGGTGGTGGATGGGAATTCCACGACCTTTGAACACCAGCAGCCGCTGGAGG 1673 | | | || ||||| |||||||| ||| ||| | ||||| || | || |||||| Sbjct 127529 ATACGGGTACTGTGGTTGATGGGAACAGCACTACCCTGGAACATAAGGAACCTTTGGAGG 127470 Query 1674 ACCGCATGTTC 1684 | | |||||| Sbjct 127469 AAAGAATGTTC 127459 Score = 197 bits (218), Expect = 4e-47 Identities = 239/323 (74%), Gaps = 3/323 (1%) Strand=Plus/Minus Query 2989 CGCCTACTTTGGATACAGCACCCCCTGGGGGTACTTTGACTTTAACCGCTTCCACAGCCA 3048 ||||||||| || ||||||||||| |||| ||| | ||||| ||| | ||||| |||| Sbjct 126157 CGCCTACTTGGGTTACAGCACCCC-TGGGCCTACCTCGACTTCAACAGATTCCAGTGCCA 126099 Query 3049 CTGGAGCCCCCGAGACTGGCAAAGACTCATCAACAACTACTGGGGCTTCAGACCCCGGTC 3108 |||||| |||| |||||| || ||||||||||||||||||||||| || |||| | | Sbjct 126098 CTGGAGTCCCCAAGACTGTCAGCGACTCATCAACAACTACTGGGGCATCCGACCAAAGGC 126039 Query 3109 CCTCAGAGTCAAAATCTTCAACATTCAAGTCAAAGAGGTCACGG-TGCAGGACTCCACCA 3167 | ||| ||||||| |||||||| ||||| || ||||||| || |||| | ||| | Sbjct 126038 TCGTAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTCATGGAGGCAGCA-GGCACAA 125980 Query 3168 CNNNNATCGCCAACAACCTCACCTCCACCGTCCAAGTGTTTACGGACGACGACTACCAGC 3227 || ||||| ||||| || || ||| |||| | ||| | || ||| ||||||| Sbjct 125979 AGACAATTGCCAATAACCTAACGTCAACCATCCAGATTTTTGCAGATGACACATACCAGC 125920 Query 3228 TGCCCTACGTCGTCGGCAACGGGACCGAGGGATGCCTGCCGGCCTTCCCTCCGCAGGTCT 3287 |||| ||||| || || || | |||||||| ||| |||| || || || | || | Sbjct 125919 TGCCATACGTGGTTGGAAATGCCACCGAGGGGTGCTTGCCCGCTTTTCCCGGTGATGTTT 125860 Query 3288 TTACGCTGCCGCAGTACGGTTAC 3310 ||| | ||| |||||| | ||| Sbjct 125859 TTATGTGGCCTCAGTACTGGTAC 125837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14703611386535