Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_006152.1
Length=4642
Score E
Sequences producing significant alignments: (Bits) Value
seq135 224 3e-55
>seq135
Length=518716
Score = 224 bits (248), Expect = 3e-55
Identities = 274/371 (74%), Gaps = 2/371 (1%)
Strand=Plus/Minus
Query 1316 TTCAACAAGAGGAACA-CCGTCTGGCTCTACGGACCCGCCACGACCGGCAAGACCAACAT 1374
||||||||| | ||| || ||||| ||||| |||| || || ||| ||||||| | |||
Sbjct 127829 TTCAACAAGTGCAACCGCCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCAT 127770
Query 1375 CGCGGAGGCCATCGCCCACACTGTGCCCTTTTACGGCTGCGTGAACTGGACCAATGAAAA 1434
|| ||||||||| |||| ||||||| ||||| ||||| | |||||||| |||| ||
Sbjct 127769 CGTGGAGGCCATTGCCCGTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAA 127710
Query 1435 CTTTCCCTTTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAGGAGGGAAAGATGAC 1494
|||||| || |||||||| || || || ||| | |||||||||||||| |||||||||||
Sbjct 127709 CTTTCCTTTCAATGACTGGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGAC 127650
Query 1495 CAACAAGGTGGTTGAATCCGCCAAGGCCATCCTGGGGGGCTCAAAGGTGC-GGGTCGATC 1553
|| || | || || || || || ||||| |||| || || ||| |||| ||||
Sbjct 127649 CAGTAAAATTGTAGAGTCTGCTAAAGCCATTTTGGGTGGGTCGGCCATGCGGGGTTGATC 127590
Query 1554 AGAAATGTAAATCCTCTGTTCAAATTGATTCTACCCCTGTCATTGTAACTTCCAATACAA 1613
| ||||||||| ||||| |||||||| | || ||||| || | || |||| |
Sbjct 127589 AAAAATGTAAAGGTTCTGTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATATAT 127530
Query 1614 ACATGTGTGTGGTGGTGGATGGGAATTCCACGACCTTTGAACACCAGCAGCCGCTGGAGG 1673
| | | || ||||| |||||||| ||| ||| | ||||| || | || ||||||
Sbjct 127529 ATACGGGTACTGTGGTTGATGGGAACAGCACTACCCTGGAACATAAGGAACCTTTGGAGG 127470
Query 1674 ACCGCATGTTC 1684
| | ||||||
Sbjct 127469 AAAGAATGTTC 127459
Score = 197 bits (218), Expect = 4e-47
Identities = 239/323 (74%), Gaps = 3/323 (1%)
Strand=Plus/Minus
Query 2989 CGCCTACTTTGGATACAGCACCCCCTGGGGGTACTTTGACTTTAACCGCTTCCACAGCCA 3048
||||||||| || ||||||||||| |||| ||| | ||||| ||| | ||||| ||||
Sbjct 126157 CGCCTACTTGGGTTACAGCACCCC-TGGGCCTACCTCGACTTCAACAGATTCCAGTGCCA 126099
Query 3049 CTGGAGCCCCCGAGACTGGCAAAGACTCATCAACAACTACTGGGGCTTCAGACCCCGGTC 3108
|||||| |||| |||||| || ||||||||||||||||||||||| || |||| | |
Sbjct 126098 CTGGAGTCCCCAAGACTGTCAGCGACTCATCAACAACTACTGGGGCATCCGACCAAAGGC 126039
Query 3109 CCTCAGAGTCAAAATCTTCAACATTCAAGTCAAAGAGGTCACGG-TGCAGGACTCCACCA 3167
| ||| ||||||| |||||||| ||||| || ||||||| || |||| | ||| |
Sbjct 126038 TCGTAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTCATGGAGGCAGCA-GGCACAA 125980
Query 3168 CNNNNATCGCCAACAACCTCACCTCCACCGTCCAAGTGTTTACGGACGACGACTACCAGC 3227
|| ||||| ||||| || || ||| |||| | ||| | || ||| |||||||
Sbjct 125979 AGACAATTGCCAATAACCTAACGTCAACCATCCAGATTTTTGCAGATGACACATACCAGC 125920
Query 3228 TGCCCTACGTCGTCGGCAACGGGACCGAGGGATGCCTGCCGGCCTTCCCTCCGCAGGTCT 3287
|||| ||||| || || || | |||||||| ||| |||| || || || | || |
Sbjct 125919 TGCCATACGTGGTTGGAAATGCCACCGAGGGGTGCTTGCCCGCTTTTCCCGGTGATGTTT 125860
Query 3288 TTACGCTGCCGCAGTACGGTTAC 3310
||| | ||| |||||| | |||
Sbjct 125859 TTATGTGGCCTCAGTACTGGTAC 125837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14703611386535
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |