Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_006260.1 Length=4721 Score E Sequences producing significant alignments: (Bits) Value seq135 158 4e-35 >seq135 Length=518716 Score = 158 bits (174), Expect = 4e-35 Identities = 270/388 (70%), Gaps = 4/388 (1%) Strand=Plus/Minus Query 1287 CTGGGCCCAGAAAAAGTTCGGGAAGCGCAACA-CCATCTGGCTGTTTGGGCCCGCCACCA 1345 |||||||| | ||||| ||| ||||| |||||||| | | | || || |||| Sbjct 127845 CTGGGCCCGGCGGGAGTTCAACAAGTGCAACCGCCATCTGGTTCTACAGACCTGCGACCA 127786 Query 1346 CCGGCAAGACCAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCA 1405 || ||||||| | ||| | ||| ||||| |||| || ||||| || || ||||| | | Sbjct 127785 CCAGCAAGACAAGCATCGTGGAGGCCATTGCCCGTGCTGTGCCATTTTATGGCTGTGGAA 127726 Query 1406 ACTGGACCAATGAGAACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGG 1465 ||||||| |||| ||||||||| ||||| || || || || ||||||||||| ||||||| Sbjct 127725 ACTGGACTAATGGGAACTTTCCTTTCAATGACTGGGTAGATAAGATGGTGATTTGGTGGG 127666 Query 1466 AGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGG--CAG 1523 |||| || |||||||| || | || ||||| || || |||||| | || || | | Sbjct 127665 AGGAAGGAAAGATGACCAGTAAAATTGTAGAGTCTGCTAAAGCCATTTTGGGTGGGTCGG 127606 Query 1524 CAAGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGAT 1583 | | | | | || || ||||| || || || | || || || || || || || | Sbjct 127605 CCATGCG-GGGTTGATCAAAAATGTAAAGGTTCTGTGCAAATTGAACCAACGCCTGTACT 127547 Query 1584 CGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCA 1643 | ||| || | | | | | | ||| |||| ||||||||||| ||| | || || Sbjct 127546 TATTACCAGTAATATATATACGGGTACTGTGGTTGATGGGAACAGCACTACCCTGGAACA 127487 Query 1644 CCAGCAGCCGTTGCAGGACCGGATGTTC 1671 || | || ||| |||| | |||||| Sbjct 127486 TAAGGAACCTTTGGAGGAAAGAATGTTC 127459 Score = 131 bits (144), Expect = 5e-27 Identities = 224/321 (70%), Gaps = 3/321 (1%) Strand=Plus/Minus Query 3039 CCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACT 3098 ||||||| || ||||||||||| |||| || | ||||| ||||||||||| ||||||| Sbjct 126155 CCTACTTGGGTTACAGCACCCC-TGGGCCTACCTCGACTTCAACAGATTCCAGTGCCACT 126097 Query 3099 TCTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAAGC 3158 || | ||||| |||||||||||||||||| ||||||| |||| || ||| | Sbjct 126096 GGAGTCCCCAAGACTGTCAGCGACTCATCAACAACTACTGGGGCATCCGACCAAAGGCTC 126037 Query 3159 TGCGGTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGACGAATGACGGCGTTACGA 3218 | |||| | |||||||| || || |||||||||| | | | ||| | || Sbjct 126036 GTAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTCATGGAGGCAGCAGGCACAAAGA 125977 Query 3219 CCATCGCTAATAACCTTACCAGCACGATTCAGGTATTCTCGGACTCGGAATACCAGCTGC 3278 | || || |||||||| || || || ||| | || | || ||||||||||| Sbjct 125976 CAATTGCCAATAACCTAACGTCAACCATCCAGATTTTTGCAGATGACACATACCAGCTGC 125917 Query 3279 CGTACGTCCTCGGCTCTGCGCACC-AGGGCTGCCTGCCTCCGTTCCCGGCGGACGTCTTC 3337 | ||||| | || ||| |||| |||| ||| |||| | || || | || || || Sbjct 125916 CATACGTGGTTGGAAATGC-CACCGAGGGGTGCTTGCCCGCTTTTCCCGGTGATGTTTTT 125858 Query 3338 ATGATTCCTCAGTACGGCTAC 3358 ||| ||||||||| | ||| Sbjct 125857 ATGTGGCCTCAGTACTGGTAC 125837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14955746246430