Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_006260.1
Length=4721
Score E
Sequences producing significant alignments: (Bits) Value
seq135 158 4e-35
>seq135
Length=518716
Score = 158 bits (174), Expect = 4e-35
Identities = 270/388 (70%), Gaps = 4/388 (1%)
Strand=Plus/Minus
Query 1287 CTGGGCCCAGAAAAAGTTCGGGAAGCGCAACA-CCATCTGGCTGTTTGGGCCCGCCACCA 1345
|||||||| | ||||| ||| ||||| |||||||| | | | || || ||||
Sbjct 127845 CTGGGCCCGGCGGGAGTTCAACAAGTGCAACCGCCATCTGGTTCTACAGACCTGCGACCA 127786
Query 1346 CCGGCAAGACCAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCA 1405
|| ||||||| | ||| | ||| ||||| |||| || ||||| || || ||||| | |
Sbjct 127785 CCAGCAAGACAAGCATCGTGGAGGCCATTGCCCGTGCTGTGCCATTTTATGGCTGTGGAA 127726
Query 1406 ACTGGACCAATGAGAACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGG 1465
||||||| |||| ||||||||| ||||| || || || || ||||||||||| |||||||
Sbjct 127725 ACTGGACTAATGGGAACTTTCCTTTCAATGACTGGGTAGATAAGATGGTGATTTGGTGGG 127666
Query 1466 AGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGG--CAG 1523
|||| || |||||||| || | || ||||| || || |||||| | || || | |
Sbjct 127665 AGGAAGGAAAGATGACCAGTAAAATTGTAGAGTCTGCTAAAGCCATTTTGGGTGGGTCGG 127606
Query 1524 CAAGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGAT 1583
| | | | | || || ||||| || || || | || || || || || || || |
Sbjct 127605 CCATGCG-GGGTTGATCAAAAATGTAAAGGTTCTGTGCAAATTGAACCAACGCCTGTACT 127547
Query 1584 CGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCA 1643
| ||| || | | | | | | ||| |||| ||||||||||| ||| | || ||
Sbjct 127546 TATTACCAGTAATATATATACGGGTACTGTGGTTGATGGGAACAGCACTACCCTGGAACA 127487
Query 1644 CCAGCAGCCGTTGCAGGACCGGATGTTC 1671
|| | || ||| |||| | ||||||
Sbjct 127486 TAAGGAACCTTTGGAGGAAAGAATGTTC 127459
Score = 131 bits (144), Expect = 5e-27
Identities = 224/321 (70%), Gaps = 3/321 (1%)
Strand=Plus/Minus
Query 3039 CCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACT 3098
||||||| || ||||||||||| |||| || | ||||| ||||||||||| |||||||
Sbjct 126155 CCTACTTGGGTTACAGCACCCC-TGGGCCTACCTCGACTTCAACAGATTCCAGTGCCACT 126097
Query 3099 TCTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAAGC 3158
|| | ||||| |||||||||||||||||| ||||||| |||| || ||| |
Sbjct 126096 GGAGTCCCCAAGACTGTCAGCGACTCATCAACAACTACTGGGGCATCCGACCAAAGGCTC 126037
Query 3159 TGCGGTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGACGAATGACGGCGTTACGA 3218
| |||| | |||||||| || || |||||||||| | | | ||| | ||
Sbjct 126036 GTAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTCATGGAGGCAGCAGGCACAAAGA 125977
Query 3219 CCATCGCTAATAACCTTACCAGCACGATTCAGGTATTCTCGGACTCGGAATACCAGCTGC 3278
| || || |||||||| || || || ||| | || | || |||||||||||
Sbjct 125976 CAATTGCCAATAACCTAACGTCAACCATCCAGATTTTTGCAGATGACACATACCAGCTGC 125917
Query 3279 CGTACGTCCTCGGCTCTGCGCACC-AGGGCTGCCTGCCTCCGTTCCCGGCGGACGTCTTC 3337
| ||||| | || ||| |||| |||| ||| |||| | || || | || || ||
Sbjct 125916 CATACGTGGTTGGAAATGC-CACCGAGGGGTGCTTGCCCGCTTTTCCCGGTGATGTTTTT 125858
Query 3338 ATGATTCCTCAGTACGGCTAC 3358
||| ||||||||| | |||
Sbjct 125857 ATGTGGCCTCAGTACTGGTAC 125837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 14955746246430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |