Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02]
240,557 sequences; 2,551,401,796 total letters
Query= NC_006261.1
Length=4393
Score E
Sequences producing significant alignments: (Bits) Value
seq135 168 2e-38
>seq135
Length=518716
Score = 168 bits (186), Expect = 2e-38
Identities = 230/320 (72%), Gaps = 1/320 (0%)
Strand=Plus/Minus
Query 2941 CCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACT 3000
||||||| || ||||||||||| |||| || | ||||| ||||||||||| |||||||
Sbjct 126155 CCTACTTGGGTTACAGCACCCC-TGGGCCTACCTCGACTTCAACAGATTCCAGTGCCACT 126097
Query 3001 TTTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAGAC 3060
|| | ||||| |||||||||||||||||| ||||||| |||| || ||| |
Sbjct 126096 GGAGTCCCCAAGACTGTCAGCGACTCATCAACAACTACTGGGGCATCCGACCAAAGGCTC 126037
Query 3061 TCAGCTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGCAGAATGAAGGCACCAAGA 3120
|| |||| | |||||||| || || |||||||||| | || | |||||| ||||
Sbjct 126036 GTAGAATCAAAATTTTCAACATACAAGTTAAGGAGGTCATGGAGGCAGCAGGCACAAAGA 125977
Query 3121 CCATCGCCAATAACCTCACCAGCACCATCCAGGTGTTTACGGACTCGGAGTACCAGCTGC 3180
| || ||||||||||| || ||||||||| | ||| | || ||||||||||
Sbjct 125976 CAATTGCCAATAACCTAACGTCAACCATCCAGATTTTTGCAGATGACACATACCAGCTGC 125917
Query 3181 CGTACGTTCTCGGCTCTGCCCACCAGGGCTGCCTGCCTCCGTTCCCGGCGGACGTGTTCA 3240
| ||||| | || |||| | |||| ||| |||| | || || | || || || |
Sbjct 125916 CATACGTGGTTGGAAATGCCACCGAGGGGTGCTTGCCCGCTTTTCCCGGTGATGTTTTTA 125857
Query 3241 TGATTCCCCAGTACGGCTAC 3260
|| || |||||| | |||
Sbjct 125856 TGTGGCCTCAGTACTGGTAC 125837
Score = 154 bits (170), Expect = 4e-34
Identities = 248/354 (70%), Gaps = 3/354 (1%)
Strand=Plus/Minus
Query 1218 CCATCTGGCTGTTTGGACCCGCCACCACCGGCAAGACCAACATTGCGGAAGCCATCGCCC 1277
|||||||| | | |||| || |||||| ||||||| | ||| | ||| ||||| ||||
Sbjct 127812 CCATCTGGTTCTACAGACCTGCGACCACCAGCAAGACAAGCATCGTGGAGGCCATTGCCC 127753
Query 1278 ACGCCGTGCCCTTCTACGGCTGCGTCAACTGGACCAATGAGAACTTTCCCTTCAATGATT 1337
|| ||||| || || ||||| | |||||||| |||| ||||||||| |||||||| |
Sbjct 127752 GTGCTGTGCCATTTTATGGCTGTGGAAACTGGACTAATGGGAACTTTCCTTTCAATGACT 127693
Query 1338 GCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGT 1397
| || || ||||||||||| ||||||||||| || |||||||| || | || ||||
Sbjct 127692 GGGTAGATAAGATGGTGATTTGGTGGGAGGAAGGAAAGATGACCAGTAAAATTGTAGAGT 127633
Query 1398 CCGCCAAGGCCATTCTCGGCGG--CAGCAAGGTGCGCGTGGACCAAAAGTGCAAGTCGTC 1455
| || || |||||| | || || | || | | | | || || ||||| || || ||
Sbjct 127632 CTGCTAAAGCCATTTTGGGTGGGTCGGCCATGCG-GGGTTGATCAAAAATGTAAAGGTTC 127574
Query 1456 CGCCCAGATCGACCCCACCCCCGTGATCGTCACCTCCAACACCAACATGTGCGCCGTGAT 1515
| || || || || || || || | | ||| || | | | | | | ||| |
Sbjct 127573 TGTGCAAATTGAACCAACGCCTGTACTTATTACCAGTAATATATATACGGGTACTGTGGT 127514
Query 1516 TGACGGGAACAGCACCACCTTCGAGCACCAGCAGCCTCTCCAGGACCGGATGTT 1569
||| ||||||||||| ||| | || || || | ||| | |||| | |||||
Sbjct 127513 TGATGGGAACAGCACTACCCTGGAACATAAGGAACCTTTGGAGGAAAGAATGTT 127460
Score = 89.7 bits (98), Expect = 1e-14
Identities = 183/271 (68%), Gaps = 6/271 (2%)
Strand=Plus/Minus
Query 3957 GACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATTCCTCACACGGACGGCAACTTCCAC 4016
||| | || || ||||| || || ||||| || |||| |||| || ||||| || ||
Sbjct 124940 GACATCTATCTCCAGGGCCCTATTTGGGCGAAAGCTCCTGACACTGATGGCAATTTTCAG 124881
Query 4017 CCGTCTCCGCTGATGGGCGGCTTTGGCCTGAAACATCCTCCGCCTCAGATCCTGATCAAG 4076
|| ||| ||||| |||| ||| |||||||| || || ||| ||| ||
Sbjct 124880 CCTCATCCTAACATGGGAGGCTCTGGGTGCAAACATCCACCTCCGATGATTCTGCAGAAA 124821
Query 4077 AACACGCCTGTACCTGCGGATCCTCCGACCACCTTCAACCAGTCAAAGC---TGAACTCT 4133
|| || || || ||||| || ||||| | |||||| | || || | || |||
Sbjct 124820 AATACTCCAGTCCCTGCAGAACCTCCTGCGGCCTTCACTGA---AACGCCTATTAAGTCT 124764
Query 4134 TTCATCACGCAATACAGCACCGGACAGGTCAGCGTGGAAATTGAATGGGAGCTGCAGAAG 4193
|| || | || || ||| || ||||| | ||||||||||| ||||||| |
Sbjct 124763 TTTATTAGTCAGTATTCCACTGGTCAGGTAACAGTGGAAATTGATTGGGAGCAAAAATCA 124704
Query 4194 GAAAACAGCAAGCGCTGGAACCCCGAGATCC 4224
||| |||||| |||||||| || |||||||
Sbjct 124703 GAATCCAGCAAACGCTGGAATCCAGAGATCC 124673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 13908907840790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |