Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_006263.1 Length=4682 Score E Sequences producing significant alignments: (Bits) Value seq135 219 1e-53 >seq135 Length=518716 Score = 219 bits (242), Expect = 1e-53 Identities = 252/338 (75%), Gaps = 1/338 (0%) Strand=Plus/Minus Query 1244 GACCTGCGACCACCGGCAAGACCAACATCGCGGAGGCTATTGCCCATGCTGTGCCGTTCT 1303 |||||||||||||| ||||||| | ||||| |||||| ||||||| ||||||||| || | Sbjct 127797 GACCTGCGACCACCAGCAAGACAAGCATCGTGGAGGCCATTGCCCGTGCTGTGCCATTTT 127738 Query 1304 ATGGATGCGTTAACTGGACCAACGAGAACTTTCCGTTCAACGACTGCGTCGAAAAGATGA 1363 |||| || | |||||||| || | ||||||||| ||||| ||||| || || |||||| Sbjct 127737 ATGGCTGTGGAAACTGGACTAATGGGAACTTTCCTTTCAATGACTGGGTAGATAAGATGG 127678 Query 1364 TTATCTGGTGGGAAGAGGGCAAAATGACCGCCAAGGTGGTGGAAACGGCTAAAGCGATTC 1423 | || |||||||| || || || |||||| || | || || | |||||||| ||| Sbjct 127677 TGATTTGGTGGGAGGAAGGAAAGATGACCAGTAAAATTGTAGAGTCTGCTAAAGCCATTT 127618 Query 1424 TGGGAGGATCTCGGGTG-AGAGTGGACCAAAAATGCAAAGCTTCGGTTCCGATCGAACCG 1482 |||| || || || | || || |||||||| |||| ||| || | || ||||| Sbjct 127617 TGGGTGGGTCGGCCATGCGGGGTTGATCAAAAATGTAAAGGTTCTGTGCAAATTGAACCA 127558 Query 1483 ACGCCGGTCATTATTACCAGTAACACCAACATGTGTTATGTCATCGACGGGAACACGACT 1542 ||||| || ||||||||||||| | | | | || ||| | || ||||||| ||| Sbjct 127557 ACGCCTGTACTTATTACCAGTAATATATATACGGGTACTGTGGTTGATGGGAACAGCACT 127498 Query 1543 ACGTTCGAGCATAAGCAGCCGTTGGAGGACAGGATGTT 1580 || | || |||||| | || |||||||| || ||||| Sbjct 127497 ACCCTGGAACATAAGGAACCTTTGGAGGAAAGAATGTT 127460 Score = 113 bits (124), Expect = 1e-21 Identities = 290/436 (67%), Gaps = 23/436 (5%) Strand=Plus/Minus Query 2925 TCCTCGGGAAATTGGCATTGCGATTCCCAATGGCTGGACAACGGAGTC--GTTACC---C 2979 ||||| |||||||||||| | ||||| ||||| |||| ||| || || ||| | Sbjct 126290 TCCTCAGGAAATTGGCAT-GTGATTCTCAATG-----ACAAGGGAATCTCGTCACCACTC 126237 Query 2980 GAACCACTCGAACCTGGGTCCTGCCCAGCTACAACAACCACTTGTACAAGCGGATCCAAG 3039 | |||| |||| ||||| | ||| ||| ||||| | | ||||||| ||| ||| Sbjct 126236 GTTCCACGAGAACTTGGGTGTTCCCCTTCTATGACAACAATCTCTACAAGCAGATTAAAG 126177 Query 3040 GACCGGGAG--GAACCGACCCCAACAATAAATTCTTTGGATTCAGCACCCCCTGGGGGTA 3097 | | | || | || | | ||| || | ||||||||| |||| || Sbjct 126176 GCCATGCCTCTGACATGTCCGCC--------TACTTGGGTTACAGCACCCC-TGGGCCTA 126126 Query 3098 CTTTGACTACAACCGATTCCACTGCCACTTCTCCCCCCGAGACTGGCAACGACTCATCAA 3157 | | |||| |||| ||||||| ||||||| |||| |||||| || ||||||||||| Sbjct 126125 CCTCGACTTCAACAGATTCCAGTGCCACTGGAGTCCCCAAGACTGTCAGCGACTCATCAA 126066 Query 3158 CAACAACTGGGGCATCCGACCCAAAGCGATGCGCTTTAGACTCTTTAACATCCAGGTTAA 3217 |||| |||||||||||||||| || || | | | | | || ||||| || ||||| Sbjct 126065 CAACTACTGGGGCATCCGACCAAAGGCTCGTAGAATCAAAATTTTCAACATACAAGTTAA 126006 Query 3218 AGAAGTCACTGTCCAAGACTCCAACACCACCATCGCCAACAACCTCACCAGCACGGTCCA 3277 || |||| | || || | || || ||||| ||||| || || |||| Sbjct 126005 GGAGGTCATGGAGGCAGCAGGCACAAAGACAATTGCCAATAACCTAACGTCAACCATCCA 125946 Query 3278 AGTCTTTGCGGACAAGGACTACCAGCTGCCGTACGTCCTCGGATCGGCTACAGAGGGCAC 3337 | ||||| || | ||||||||||| ||||| | ||| || || ||||| Sbjct 125945 GATTTTTGCAGATGACACATACCAGCTGCCATACGTGGTTGGAAATGCCACCGAGGGGTG 125886 Query 3338 CTT-CCCGCCGTTCCC 3352 ||| ||||| ||||| Sbjct 125885 CTTGCCCGCTTTTCCC 125870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14831274606735