Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tursiops_20truncatus_20[genbank_20GCA_5F000151865.3_202012-01-02] 240,557 sequences; 2,551,401,796 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq219640 214 7e-52 seq224909 104 9e-19 seq43270 95.1 5e-16 >seq219640 Length=810 Score = 214 bits (236), Expect = 7e-52 Identities = 209/264 (79%), Gaps = 4/264 (2%) Strand=Plus/Plus Query 5575 GCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCTCCGGCTTTCCCCGTCAAGCT 5634 ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 360 GCTGCTTTCACTTTCTTCCCTTCCTTTCTCGCCACGTTCGCCGGCTTTCCCCGTCAAGCT 419 Query 5635 CTAAATCGGGGGATCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCTCCAA 5694 ||||||| ||| | |||| || || ||| ||||||| |||||||||| ||| | Sbjct 420 CTAAATCCGGGACTAAATTTATGGCTCAAATTAAGTGCTTAACGGCACCTCAACCCCATG 479 Query 5695 AAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGTTTTTCGC 5754 |||| |||| |||||||||||||| |||||| |||||| || | | |||||||||||| Sbjct 480 AAACAAGATTAGGGTGATGGTTCACCTAGTGGACCATCGACCAGGAAAACGGTTTTTCGC 539 Query 5755 CCTTTGACGTTGGAGTCCACGTTCTTTAATAGTGGACTCTTGTTCCAAACTGGAACAACA 5814 ||||||| |||||| | | || ||| | |||| ||| | | ||||||||| ||| Sbjct 540 CCTTTGAAGTTGGAAT-GGTGATC-ATAACAATGGAATCTAG-TAAAAACTGGAAGAAC- 595 Query 5815 CTCACAACTAACTCGGCCTATTCT 5838 |||| | | |||| ||||||| Sbjct 596 CTCATCCCCATATCGGTCTATTCT 619 >seq224909 Length=887 Score = 104 bits (114), Expect = 9e-19 Identities = 166/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 5515 GCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCTACACTTGCCAGCGCCCTAGCGCCC 5574 |||| || |||| ||||||||| || || || |||| |||| |||| ||| || | || Sbjct 283 GCGGTGGTTGTGATGGTTACGCTCATCGCGAATGCTATACTTACCAGAGCCTTACGGTCC 342 Query 5575 GCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACGTTCTCCGGCTTTCCCCGTCAAGCT 5634 | | ||| || |||| | ||||||| |||||| || | || ||||||| ||| || Sbjct 343 ACGCAGTTCATTTCCTTCTGT-CCTTTCTAGCCACGGTCCCTGGTGTTCCCCGGCAAACT 401 Query 5635 CTAAATCGGGGGATCCCTTTAGGGTTCCGATTTAGTGCTTTACGGCACCTCGACCTCCAA 5694 |||| | | ||| |||||||| ||| |||| |||| ||||| | ||| | | | | Sbjct 402 CTAATTGGAGGG-TCCCTTTAAGGTAGAGATTGGGTGCATTACGAC-CCTACATCGCAAT 459 Query 5695 AAACTTGATTTGGGTGATGGTTCACGTAGTGGGCCATCGCCCTGATAGACGGT 5747 || |||| || ||| |||| |||| | ||| ||||||||||||| || Sbjct 460 AATTTTGAAGAAGGCGATAATTCAA-TAGTCGCCCAGCGCCCTGATAGACAGT 511 >seq43270 Length=6877 Score = 95.1 bits (104), Expect = 5e-16 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 5491 GCGCCCTGTAGCGGCGCATTAAGCGCGGCGGGTGTGGTGGTTACGCGCAGCGTGACCGCT 5550 || ||||||||| |||| ||| || | |||||||||||| |||||| |||||| | Sbjct 6607 GCTCCCTGTAGCTGCGCCTTATCCGTGTATCGTGTGGTGGTTAAGCGCAGAGTGACCCTT 6548 Query 5551 ACACTTGCCAGCGCCCTAGCGCCCGCTCCTTTCGCTTTCTTCCCTTCCTTTCTCGCCACG 5610 ||| |||| |||||||| | |||||| |||| ||||| ||| || ||| |||| | Sbjct 6547 GCACATGCCGGCGCCCTAACTCCCGCTAATTTCACTTTCATCCATTTATTTTTCGCTTCT 6488 Query 5611 TTCTCCGGCTTT 5622 ||| || ||||| Sbjct 6487 TTCGCCAGCTTT 6476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20335218148656