Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= NC_001401.2 Length=4679 Score E Sequences producing significant alignments: (Bits) Value seq258 77.0 1e-10 >seq258 Length=2173705 Score = 77.0 bits (84), Expect = 1e-10 Identities = 80/103 (78%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 4204 TCCTTCATCACACAGTACTCCACGGGACAGGTCAGCGTGGAGATCGAGTGGGAGCTGCAG 4263 || ||||| | ||||||||||| |||||||| | | ||||| ||||||||| | | Sbjct 1513790 TCTTTCATTAATCAGTACTCCACAGGACAGGTTACAGGAGAGATGGAGTGGGAGAT--TG 1513733 Query 4264 AAGG--AAAACAGCAAACGCTGGAATCCCGAAATTCAGTACAC 4304 |||| ||||||| || | ||||||||| || ||||| ||||| Sbjct 1513732 AAGGAAAAAACAGTAAGCACTGGAATCCAGAGATTCAATACAC 1513690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14815821118500