Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001510.1 Length=5149 Score E Sequences producing significant alignments: (Bits) Value seq108040 251 2e-63 seq88340 192 2e-45 seq62551 152 2e-33 seq72496 131 5e-27 seq45063 131 5e-27 seq112444 100 9e-18 seq117373 89.7 2e-14 >seq108040 Length=26046 Score = 251 bits (278), Expect = 2e-63 Identities = 286/381 (75%), Gaps = 2/381 (1%) Strand=Plus/Plus Query 1407 TGTGTTTTAAACAGACAAGGAGGCAAAAGAAATACTGTTTTATT-TCATGGACCAGCCAG 1465 ||||| ||||||| |||| || |||||||| || ||||| | ||| |||||||| || Sbjct 11765 TGTGTCTTAAACAAACAACTTGGAAAAAGAAACACAATTTTACTCTCA-GGACCAGCAAG 11823 Query 1466 CACAGGCAAATCTATTATTGCACAAGCCATAGCACAAGCAGTTGGCAATGTTGGTTGCTA 1525 ||| || ||| | || || ||| || | ||||| ||||| |||||||| Sbjct 11824 CACTGGAAAAAGCTTAATAGCTCAAAAAATCTGTGAGTTGGTTGGTAATGTCGGTTGCTA 11883 Query 1526 TAATGCAGCCAATGTAAACTTTCCATTTAATGACTGTACCAACAAGAACTTGATTTGGGT 1585 ||| || |||||||||||||||||| ||||||||| | || || | |||||| | Sbjct 11884 CAATCCAAGCAATGTAAACTTTCCATTCAATGACTGTTGCTCTAAAAATATCATTTGGAT 11943 Query 1586 AGAAGAAGCTGGTAACTTTGGACAGCAAGTAAACCAGTTTAAAGCCATTTGCTCTGGTCA 1645 |||||||| || || | ||||| ||||||||||| || |||||||||| || || || Sbjct 11944 TGAAGAAGCAGGAAATCTAGGACACCAAGTAAACCAATTCAAAGCCATTTTGTCAGGACA 12003 Query 1646 AACTATTCGCATTGATCAAAAAGGAAAAGGCAGCAAACAGATTGAACCAACACCAGTCAT 1705 | |||| | | || ||||||||||||||||||||| || |||||||||||||| || Sbjct 12004 ATCTATCAGATTAGACCAAAAAGGAAAAGGCAGCAAATCTATAGAACCAACACCAGTAAT 12063 Query 1706 CATGACCACAAATGAGAACATTACAGTGGTCAGAATAGGCTGCGAAGAAAGACCAGAACA 1765 ||||| | ||||| | || ||| || ||||||||||||||| |||||||||||| Sbjct 12064 AATGACATCCAATGAAGATATAACACAAGTAAGAATAGGCTGCGAACTAAGACCAGAACA 12123 Query 1766 CACTCAACCAATCAGAGACAG 1786 ||| ||||||| | | |||| Sbjct 12124 CACCGAACCAATAAAACACAG 12144 Score = 91.5 bits (100), Expect = 5e-15 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 2410 CCTGGCTACAAGTACCTGGGACCAGGGAACAGCCTTGACCAAGGAGAACCAACCAATCCA 2469 || |||||||| ||| |||||||||| |||| |||||||||||||||||||| || | | Sbjct 12722 CCGGGCTACAAATACGTGGGACCAGGCAACACACTTGACCAAGGAGAACCAACTAACCAA 12781 Query 2470 TCTGACGCCGCTGCCAAAGAGCACGACGAGGCCTATGATC-AATACATCAAATCTGGAAA 2528 ||| |||||||| | |||||| | || ||| ||||| | || | ||| | Sbjct 12782 AGTGATAAGGCTGCCAAGAAACACGACCAACATTACCATCTCATACAAC-AAGCCGGACA 12840 Query 2529 AAATCCTTACCTGTACTTCTCTGCTGCTGATCAACGC-TTTATTGACCAAACCAAGGACG 2587 ||||||||||| ||||| | || || || | |||||||| |||| | | | Sbjct 12841 TAATCCTTACCTATACTTTAACGAAGCAGA-CAGGACTTTTATTGAAGAAACAGAAAAAG 12899 Query 2588 CCAAAGACTGGGGAGG 2603 | | |||||||||||| Sbjct 12900 CAACAGACTGGGGAGG 12915 >seq88340 Length=24873 Score = 192 bits (212), Expect = 2e-45 Identities = 255/353 (72%), Gaps = 2/353 (1%) Strand=Plus/Minus Query 1427 AGGCAAAAGAAATACTGTTTTATTTCATGGACCAGCCAGCACAGGCAAATCTATTATTGC 1486 ||| |||||||| || | ||||| || ||||||| |||||||| ||| | | ||||| Sbjct 11213 AGGTAAAAGAAACACAATCTTATTACAAGGACCAGTGAGCACAGGAAAAAGTCTAATTGC 11154 Query 1487 ACAAGCCATAGCACAAGCAGTTGGCAATGTTGGTTGCTATAATGCAGCCAATGTAAACTT 1546 ||| ||| | |||||| |||||||| ||||| ||| || ||||||||||||| Sbjct 11153 TCAAAATATATGTGAGTTAGTTGGTAATGTTGGATGCTACAATTCATCCAATGTAAACTT 11094 Query 1547 TCCATTTAATGACTGTACCAACAAGAACTTGATTTGGGTAGAAGAAGCTGGTAACTTTGG 1606 ||| || || || || |||||| ||| | || | | | || ||||| | ||||| || Sbjct 11093 TCCTTTCAACGATTGCTGCAACAAAAACATTATATCGATTGAGGAAGCAAGAAACTTGGG 11034 Query 1607 ACAGCAAGTAAACCAGTTTAAAGCCATTTGCTCTGGTCAAACTATTCGCATTGATCAAAA 1666 |||||||||||||| |||||||| || || || |||| | | | | ||||| Sbjct 11033 GCAGCAAGTAAACCAATTTAAAGCAATAATGTCAGGACAAA--ACAAGATTATACCAAAA 10976 Query 1667 AGGAAAAGGCAGCAAACAGATTGAACCAACACCAGTCATCATGACCACAAATGAGAACAT 1726 |||||| |||||||| ||||||||| | ||| | || ||||| | |||||| ||| Sbjct 10975 AGGAAAGGGCAGCAAGTCCATTGAACCACCTCCAATAATAATGACATCTAATGAGGACAC 10916 Query 1727 TACAGTGGTCAGAATAGGCTGCGAAGAAAGACCAGAACACACTCAACCAATCA 1779 ||| ||| || ||||| |||| |||||| || ||| || | ||||||| Sbjct 10915 TACTTGTCTCAAAACTGGCTGTGAAGTAAGACCTGAGCACGCTGAGCCAATCA 10863 >seq62551 Length=99649 Score = 152 bits (168), Expect = 2e-33 Identities = 257/366 (70%), Gaps = 7/366 (2%) Strand=Plus/Plus Query 1416 AACAGACAAGGAGGCAAAAGAAATACTGTTTTATTTCATGGACCAGCCAGCACAGGCAAA 1475 |||| |||| || | ||||||| | | ||| || |||| ||| | ||| |||||| Sbjct 51306 AACAAACAAATGGGTGAGAGAAATA-TATCTTACTTAATGGTCCAATAAACACTGGCAAA 51364 Query 1476 TCTATTATTGCACA--AGCCATAGCACAAGCAGTTGGCAATGTTGGTTGCTATAATGCAG 1533 ||| || ||||| | | | || |||||| ||| |||||||||| ||||||| Sbjct 51365 TCTCACATAGCACAGAATCTCTCTGCCACTTAGTTGGTAATATTGGTTGCTACAATGCAG 51424 Query 1534 CCAATGTAAACTTTCCATTTAATGACTGTACCAACAAGAACTTGATTTGGGTAGAAGAAG 1593 | || || ||||| || |||||||||||| || ||| | ||||||| || || | Sbjct 51425 CTAACATATCATTTCCTTTCAATGACTGTACCTGCAGAAACATAGTTTGGGTTGAGGAGG 51484 Query 1594 CTGGTAACTTTGGACAGCAAGTAAACCAGTTTAAAGCCATT--TGCTCTGGTCAAACTAT 1651 | | || | ||| ||||| | | || || ||| | | | |||| || || || | Sbjct 51485 CAGAAAATCTAGGATAGCAAATCGATCAATTCAAA-CAACTAATGCTAGGG-CAGACAGT 51542 Query 1652 TCGCATTGATCAAAAAGGAAAAGGCAGCAAACAGATTGAACCAACACCAGTCATCATGAC 1711 | | || ||||||||||| ||| | |||||| || |||||||||| || ||||||| Sbjct 51543 TAGAATAGATCAAAAAGGGAAAAGAAGCAAAACCATAGAACCAACACTTGTAATCATGAT 51602 Query 1712 CACAAATGAGAACATTACAGTGGTCAGAATAGGCTGCGAAGAAAGACCAGAACACACTCA 1771 ||| ||||||||||| || | |||||||| | ||| || |||| | ||||| ||| | Sbjct 51603 CACCAATGAGAACATAACTGAAGTCAGAATTGACTGTGAGTTAAGATCTGAACATACTGA 51662 Query 1772 ACCAAT 1777 ||||| Sbjct 51663 GCCAAT 51668 >seq72496 Length=32857 Score = 131 bits (144), Expect = 5e-27 Identities = 192/270 (71%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 1518 GGTTGCTATAATGCAGCCAATGTAAACTTTCCATTTAATGACTGTACCAACAAGAACTTG 1577 || || || ||| || | ||||| || ||| |||||| |||||| ||| || || | Sbjct 17133 GGATGTTACAATCCATCTAATGTGAATTTTTCATTTA-TGACTGCTGCAATAAAAAGATA 17191 Query 1578 ATTTGGGTAGAAGAAGCTGGTAACTTTGGACAGCAAGTAAACCAGTTTAAAGCCATTTGC 1637 || || |||| | || |||||| | || |||||||||||||| |||||| | || Sbjct 17192 ATATG---AGAACAGGCAGGTAACCTAGGTCAGCAAGTAAACCAATTTAAATCGATAATG 17248 Query 1638 TCTGGTCAAACTATTCGCATTGATCAAAAAGGAAAAGGCAGCAAACAGATTGAACCAACA 1697 || || |||| || | | | |||||| || || ||||| ||| |||||||||||| Sbjct 17249 TCAGGACAAAGCATAAGACTAGGTCAAAAGGGGAAGGGCAGTAAAACCATTGAACCAACA 17308 Query 1698 CCAGTCATCATGACCACAAATGAGAACATTACAGTGGTCAGAATAGGCTGCGAAGAAAGA 1757 || ||||| ||||| | | ||| ||| ||||| || ||||| || || || ||| Sbjct 17309 CCTGTCATAATGACATCCAGTGAAGACACAACAGTAGTAAGAATTGGTTGTGAGATCAGA 17368 Query 1758 CCAGAACACACTCAACCAATCAGAGACAGA 1787 || |||| ||| ||| ||| ||| ||||| Sbjct 17369 CCTGAACTCACAGAACAAATAAGACACAGA 17398 >seq45063 Length=75060 Score = 131 bits (144), Expect = 5e-27 Identities = 163/218 (75%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 1505 AGTTGGCAATGTTGGTTGCTATAATGCAGCCAATGTAAACTTTCCATTTAATGACTGTAC 1564 |||||| ||||| || || || ||| || | | ||| |||||||| || ||||| || Sbjct 22119 AGTTGGTAATGTAGGATGTTACAATCCATCTA-TGTTAACTTTCCTTTCAATGATTGCTG 22061 Query 1565 CAACAAGAA-CTTGATTTGGG-TAGAAGAAGCTGGTAACTTTGGACAGCAAGTAAACCAG 1622 |||||| || ||| | ||| ||||||||||||||||||| ||||||||||||||||| Sbjct 22060 CAACAAAAAACTTCTATAGGGATAGAAGAAGCTGGTAACTTAGGACAGCAAGTAAACCAA 22001 Query 1623 TTTAAAGCCATTTGCTCTGGTCAAACTATTCGCATTGATCAAAAAGGAAAAGGCAGCAAA 1682 ||||||| || || || |||| || | | ||| ||||| ||||||| | ||| Sbjct 22000 TTTAAAGTAATCATGTCAGGACAAAGCATCAGACTAGATGAAAAA-GAAAAGGTAATAAA 21942 Query 1683 CAGATTGAACCAACACCAGTCATCATGACCACAAATGA 1720 ||||||||||| ||| | || ||||| | ||||| Sbjct 21941 TCCATTGAACCAACTCCAATAATAATGACATCCAATGA 21904 >seq112444 Length=40188 Score = 100 bits (110), Expect = 9e-18 Identities = 169/244 (69%), Gaps = 2/244 (1%) Strand=Plus/Plus Query 1598 TAACTTTGGACAGCAAGTAAACCAGTTTAAAGCCATTTGCTCTGGTCAAACTATTCGCAT 1657 |||||| ||||| |||||||||| |||||||| ||| || || |||| ||| | | Sbjct 11165 TAACTTAGGACAATAAGTAAACCAATTTAAAGCAATTATGTCAGGACAAAGCATTAGACT 11224 Query 1658 TGATCAAAAAGGAAAAGGCAGCAAACAGATTGAACCAACACCAGTCATCATGACCACAAA 1717 || | |||||| |||||||||||| ||||||||||| | ||| || ||||| | || Sbjct 11225 AGACCCAAAAGGGAAAGGCAGCAAATCTATTGAACCAACTCTAGTAATAATGACACCTAA 11284 Query 1718 TGAGAACATTACAGTGGTCAGAATAGGCTGCGAAGAAAGACCAGAACACACTCAACCAAT 1777 ||| |||| || ||||||| | ||| || || ||||| |||| | ||||| Sbjct 11285 TGAAGACATAACTTATTTCAGAATTGACTGTGATATCAGGCCAGA--GCACTGAGCCAAT 11342 Query 1778 CAGAGACAGAATGCTTAACATTCATCTAACACATACCTTGCCTGGTGACTTTGGTTTGGT 1837 | | | ||| |||| || | || ||| | || | |||| |||||| || | Sbjct 11343 AAAACATAGATGTGTTAAAATCAAACTGACAAAAACTCTATATGGTAGGTTTGGTATGAT 11402 Query 1838 TGAC 1841 |||| Sbjct 11403 TGAC 11406 >seq117373 Length=15221 Score = 89.7 bits (98), Expect = 2e-14 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 1506 GTTGGCAATGTTGGTTGCTATAATGCAGCCAATGTAAACTTTCCATTTAATGACTGTACC 1565 ||||| |||||||||| || ||| || | ||||||||||||||||| |||||||| | Sbjct 12384 GTTGGTAATGTTGGTTATTACAATCCATCAAATGTAAACTTTCCATTCAATGACTGCTGC 12443 Query 1566 AACAAGAACTTGATTTGGGTAGAAGAAGCTGGTAACTTTGGACA 1609 ||||| ||| || ||| ||||||| || || ||||| |||| Sbjct 12444 AACAAAAACACTATCTGGATAGAAGAGGCAGGAAACTTAAGACA 12487 Score = 86.0 bits (94), Expect = 2e-13 Identities = 105/140 (75%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 2410 CCTGGCTACAAGTACCTGGGACCAGGGAACAGCCTTGACCAAGGAGAACCAACCAATCCA 2469 || || |||| || |||||||| | |||| |||||||||||||||||||| || | | Sbjct 13264 CCAGGATACAGTTATCTGGGACCTAGAAACACACTTGACCAAGGAGAACCAACTAACCAA 13323 Query 2470 TCTGACGCCGCTGCCAAAGAGCACGACGAGGCCTATGATCA-ATACATCAAATCTGGAAA 2528 ||| |||||| || | |||||| || |||| |||| | || ||| |||||| Sbjct 13324 AGTGATAAAGCTGCCCAAAAACACGACCAGCACTATCATCATCTTCA--AAAATTGGAAA 13381 Query 2529 A-AATCCTTACCTGTACTTC 2547 | || ||||||||||||||| Sbjct 13382 ATAACCCTTACCTGTACTTC 13401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16315092508110