Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001718.1 Length=5075 Score E Sequences producing significant alignments: (Bits) Value seq108040 309 1e-80 seq88340 224 3e-55 seq62551 167 8e-38 seq102478 161 3e-36 seq72496 158 4e-35 seq45063 152 2e-33 seq112444 123 8e-25 seq117373 122 3e-24 seq58573 87.8 6e-14 seq106666 86.0 2e-13 >seq108040 Length=26046 Score = 309 bits (342), Expect = 1e-80 Identities = 320/413 (77%), Gaps = 12/413 (3%) Strand=Plus/Plus Query 1429 ATAACTTGTGTACTAAACAGACAAGGAGGAAAAAGAAATACAATTCTA-TTTCATGGGCC 1487 |||| ||||| |||||| |||| ||||||||||| |||||| || | ||| || || Sbjct 11759 ATAATGTGTGTCTTAAACAAACAACTTGGAAAAAGAAACACAATTTTACTCTCA-GGACC 11817 Query 1488 AGCATCAACAGGAAAAAGTATAATTGCTCAACACATTGCAAACTTAGTTGGTAATGTTGG 1547 |||| || |||||||| |||| |||||| | || | || ||||||||||| || Sbjct 11818 AGCAAGCACTGGAAAAAGCTTAATAGCTCAAAAAATCTGTGAGTTGGTTGGTAATGTCGG 11877 Query 1548 TTGCTACAATGCAGCCAATGTGAACTTTCCATTTAATGACTGTACAAATAAAAACTTAAT 1607 |||||||||| || |||||| ||||||||||| ||||||||| |||||| | || Sbjct 11878 TTGCTACAATCCAAGCAATGTAAACTTTCCATTCAATGACTGTTGCTCTAAAAATATCAT 11937 Query 1608 ATGGATTGAAGAAGCAGGAAACTTCTCTA----ACCAAGTAAACCAATTCAAAGCCATAT 1663 |||||||||||||||||||| |||| ||||||||||||||||||||||||| | Sbjct 11938 TTGGATTGAAGAAGCAGGAAA----TCTAGGACACCAAGTAAACCAATTCAAAGCCATTT 11993 Query 1664 GTTCAGGTCAAACAATTAGAATTGACCAAAAAGGTAAAGGAAGCAAACAAATTGAACCAA 1723 ||||| ||| | || ||| | ||||||||||| ||||| |||||| || ||||||| Sbjct 11994 TGTCAGGACAATCTATCAGATTAGACCAAAAAGGAAAAGGCAGCAAATCTATAGAACCAA 12053 Query 1724 CTCCTGTAATAATGACTACAAATGAAGACATAACTAAAGTTAGAATAGGATGCGAGGAAA 1783 | || ||||||||||| | |||||||| ||||| |||| |||||||| ||||| || Sbjct 12054 CACCAGTAATAATGACATCCAATGAAGATATAACACAAGTAAGAATAGGCTGCGAACTAA 12113 Query 1784 GACCAGAACATACACAACCAATAAGAGACAGAATGT-TAAACATAAACCTAAC 1835 |||||||||| || ||||||||| | |||| ||| | || || || ||||| Sbjct 12114 GACCAGAACACACCGAACCAATAAAACACAG-GTGTGTCAATATCAAACTAAC 12165 Score = 80.6 bits (88), Expect = 9e-12 Identities = 137/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 2399 CCAGGATACAAATACCTTGGTCCAGGAAACTCACTAGACCAAGGAGAACCAACTAATCCA 2458 || || ||||||||| | || ||||| ||| |||| |||||||||||||||||||| | | Sbjct 12722 CCGGGCTACAAATACGTGGGACCAGGCAACACACTTGACCAAGGAGAACCAACTAACCAA 12781 Query 2459 TCAGACGCCGCAGCAAAAGAACACGACGAAGCCTACGA-CAAATACATAAAATCTGGAAA 2517 || || || || |||||||| || ||| | | ||||| | || | ||| | Sbjct 12782 AGTGATAAGGCTGCCAAGAAACACGACCAACATTACCATCTCATACA-ACAAGCCGGACA 12840 Query 2518 AAATCCATACTTCTACTTCTCAGCAGCTGATGAAAAATTCATAAAAGAAACTGAACACGC 2577 ||||| ||| | ||||| | ||| || | || || ||||||| ||| | || Sbjct 12841 TAATCCTTACCTATACTTTAACGAAGCAGACAGGACTTTTATTGAAGAAACAGAAAAAGC 12900 Query 2578 AAAAGACTACGGAGGT 2593 || ||||| |||||| Sbjct 12901 AACAGACTGGGGAGGT 12916 >seq88340 Length=24873 Score = 224 bits (248), Expect = 3e-55 Identities = 274/373 (73%), Gaps = 2/373 (1%) Strand=Plus/Minus Query 1381 AAAATATTCAGCATGCACAATTGGAACTACATTAAAGTCTGCCATGCTATAACTTGTGTA 1440 ||||||||||| | |||| | ||| |||||||| ||| |||| || || Sbjct 11287 AAAATATTCAGACTAAACAACTACAACCCAATTAAAGTAACATGTGCAATAATGTGCATA 11228 Query 1441 CTAAACAGACAAGGAGGAAAAAGAAATACAATTCTATTTCATGGGCCAGCATCAACAGGA 1500 || |||| || ||| |||||||| ||||| |||| || || |||| |||||| Sbjct 11227 CTTAACAAGCAGCTAGGTAAAAGAAACACAATCTTATTACAAGGACCAGTGAGCACAGGA 11168 Query 1501 AAAAGTATAATTGCTCAACACATTGCAAACTTAGTTGGTAATGTTGGTTGCTACAATGCA 1560 |||||| ||||||||||| | || | ||||||||||||||||| ||||||||| || Sbjct 11167 AAAAGTCTAATTGCTCAAAATATATGTGAGTTAGTTGGTAATGTTGGATGCTACAATTCA 11108 Query 1561 GCCAATGTGAACTTTCCATTTAATGACTGTACAAATAAAAACTTAATATGGATTGAAGAA 1620 ||||||| |||||||| || || || || || |||||| | |||| |||||| ||| Sbjct 11107 TCCAATGTAAACTTTCCTTTCAACGATTGCTGCAACAAAAACATTATATCGATTGAGGAA 11048 Query 1621 GCAGGAAACTTCTCTAACCAAGTAAACCAATTCAAAGCCATATGTTCAGGTCAAACAATT 1680 ||| ||||||| | |||||||||||||| ||||| ||| ||||| ||| || Sbjct 11047 GCAAGAAACTTGGGGCAGCAAGTAAACCAATTTAAAGCAATAATGTCAGGACAA--AACA 10990 Query 1681 AGAATTGACCAAAAAGGTAAAGGAAGCAAACAAATTGAACCAACTCCTGTAATAATGACT 1740 ||| | |||||||||| || || ||||| ||||||||| |||| |||||||||| Sbjct 10989 AGATTATACCAAAAAGGAAAGGGCAGCAAGTCCATTGAACCACCTCCAATAATAATGACA 10930 Query 1741 ACAAATGAAGACA 1753 | ||||| |||| Sbjct 10929 TCTAATGAGGACA 10917 >seq62551 Length=99649 Score = 167 bits (184), Expect = 8e-38 Identities = 208/282 (74%), Gaps = 10/282 (4%) Strand=Plus/Plus Query 1529 ACTTAGTTGGTAATGTTGGTTGCTACAATGCAGCCAATGTGAACTTTCCATTTAATGACT 1588 |||||||||||||| ||||||||||||||||||| || | ||||| || ||||||| Sbjct 51392 ACTTAGTTGGTAATATTGGTTGCTACAATGCAGCTAACATATCATTTCCTTTCAATGACT 51451 Query 1589 GTACAAATAAAAACTTAATATGGATTGAAGAAGCAGGAAACTTCTCTA----ACCAAGTA 1644 |||| | |||| || | ||| |||| || |||| ||| |||| | ||| | Sbjct 51452 GTACCTGCAGAAACATAGTTTGGGTTGAGGAGGCAGAAAA----TCTAGGATAGCAAATC 51507 Query 1645 AACCAATTCAAA-GCCATATGTTCAGGTCAAACAATTAGAATTGACCAAAAAGGTAAAGG 1703 | ||||||||| | ||| | ||| || ||| ||||||| || |||||||| ||| | Sbjct 51508 GATCAATTCAAACAACTAATGCT-AGGGCAGACAGTTAGAATAGATCAAAAAGGGAAAAG 51566 Query 1704 AAGCAAACAAATTGAACCAACTCCTGTAATAATGACTACAAATGAAGACATAACTAAAGT 1763 ||||||| || |||||||| | |||||| |||| || ||||| |||||||| |||| Sbjct 51567 AAGCAAAACCATAGAACCAACACTTGTAATCATGATCACCAATGAGAACATAACTGAAGT 51626 Query 1764 TAGAATAGGATGCGAGGAAAGACCAGAACATACACAACCAAT 1805 ||||| | || ||| |||| | |||||||| | ||||| Sbjct 51627 CAGAATTGACTGTGAGTTAAGATCTGAACATACTGAGCCAAT 51668 >seq102478 Length=16333 Score = 161 bits (178), Expect = 3e-36 Identities = 240/336 (71%), Gaps = 16/336 (5%) Strand=Plus/Minus Query 1536 TGGTAATGTTGGTTGCTACAATGCAGCCAATGTGAACTTTCCATTTAATGACTGTACAAA 1595 ||| |||||| ||||||||||| ||| ||||||| ||||||||| |||||||| || | Sbjct 9431 TGGAAATGTTCGTTGCTACAATCCAGTAAATGTGAGCTTTCCATTCAATGACTGCACTCA 9372 Query 1596 TAAAAACTTAATATGGATTGAAGAAGCAGGAAACTTCTCTAACCAAGTAAACCAATTCA- 1654 ||||| |||||||| | ||| ||||| | | | ||||| |||||||||| Sbjct 9371 CAAAAATGTAATATGGGT----GAATAAGGAAGACTAGATCAACAAGTCAACCAATTCAA 9316 Query 1655 --AAGCCATATGTTCAGGTCAAACAATTAGAATTGACCAAAAAGGTAAAGGAAGCAAACA 1712 ||| |||||| || ||||||||||| || ||||| |||||||| ||| Sbjct 9315 ACAAGTGATATGT---GG----ACAATTAGAATAGA-TAAAAAAGTAAAGGATCAAAAAC 9264 Query 1713 AATTGAACCAACTCCTGTAATAATGACTACAAATGAAGACATAACTAAAGTTAGAATAGG 1772 || ||||| | ||| || | |||||||| |||||| || || || ||| | ||||||| Sbjct 9263 AACTGAACTTATTCCAGTGACAATGACTAAAAATGAGGATATTACAAAAATCAGAATAGA 9204 Query 1773 ATGCGAGGAAAGACCAGAACATACACAACCAATAAGAGACAGAATGTTAAACATAAACCT 1832 | | || || ||| | | | || || || || | ||| || || |||||| || |||| Sbjct 9203 ACGTGAACTAAAACCTGCATACACTCAGCCCATTAAAGATAG-ATATTAAACTTACACCT 9145 Query 1833 AACCAGAAAACTGCCAGGTGATTTTGGACTTTTAGA 1868 | | | | |||| | |||| |||||||| |||| Sbjct 9144 AGCAACACAACTAGGAAGTGACTTTGGACTACTAGA 9109 >seq72496 Length=32857 Score = 158 bits (174), Expect = 4e-35 Identities = 198/270 (73%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 1546 GGTTGCTACAATGCAGCCAATGTGAACTTTCCATTTAATGACTGTACAAATAAAAACTTA 1605 || || |||||| || | |||||||| ||| |||||| |||||| |||||||| || Sbjct 17133 GGATGTTACAATCCATCTAATGTGAATTTTTCATTTA-TGACTGCTGCAATAAAAAGATA 17191 Query 1606 ATATGGATTGAAGAAGCAGGAAACTTCTCTAACCAAGTAAACCAATTCAAAGCCATATGT 1665 ||||| ||| | ||||| ||| | | | |||||||||||||| ||| | ||| Sbjct 17192 ATATGA---GAACAGGCAGGTAACCTAGGTCAGCAAGTAAACCAATTTAAATCGATAATG 17248 Query 1666 TCAGGTCAAACAATTAGAATTGACCAAAAAGGTAAAGGAAGCAAACAAATTGAACCAACT 1725 ||||| |||| || ||| | | ||||| || || || || ||| ||||||||||| Sbjct 17249 TCAGGACAAAGCATAAGACTAGGTCAAAAGGGGAAGGGCAGTAAAACCATTGAACCAACA 17308 Query 1726 CCTGTAATAATGACTACAAATGAAGACATAACTAAAGTTAGAATAGGATGCGAGGAAAGA 1785 ||||| |||||||| | | |||||||| ||| ||| ||||| || || ||| ||| Sbjct 17309 CCTGTCATAATGACATCCAGTGAAGACACAACAGTAGTAAGAATTGGTTGTGAGATCAGA 17368 Query 1786 CCAGAACATACACAACCAATAAGAGACAGA 1815 || |||| ||| ||| ||||||| ||||| Sbjct 17369 CCTGAACTCACAGAACAAATAAGACACAGA 17398 >seq45063 Length=75060 Score = 152 bits (168), Expect = 2e-33 Identities = 204/276 (74%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 1497 AGGAAAAAGTATAATTGCTCAACACATTGCAAACTTAGTTGGTAATGTTGGTTGCTACAA 1556 |||||||||| | || | ||| | ||| | |||||||||||||| || || ||||| Sbjct 22155 AGGAAAAAGTCTCATAACACAAAAAATTTGTGAGTTAGTTGGTAATGTAGGATGTTACAA 22096 Query 1557 TGCAGCCAATGTGAACTTTCCATTTAATGACTG-TACAAATAAAAACTTA-ATATGGATT 1614 | || | | ||| |||||||| || ||||| || | ||| |||||||| ||| |||| Sbjct 22095 TCCATCTA-TGTTAACTTTCCTTTCAATGATTGCTGCAACAAAAAACTTCTATAGGGATA 22037 Query 1615 GAAGAAGCAGGAAACTTCTCTAACCAAGTAAACCAATTCAAAGCCAT-ATGTTCAGGTCA 1673 |||||||| || ||||| | |||||||||||||| |||| || ||| ||||| || Sbjct 22036 GAAGAAGCTGGTAACTTAGGACAGCAAGTAAACCAATTTAAAGTAATCATG-TCAGGACA 21978 Query 1674 AACAATTAGAATTGACCAAAAAGGTAAAGGAAGCAAACAAATTGAACCAACTCCTGTAAT 1733 || || ||| | || ||||| | ||||| | ||| |||||||||||||| |||| Sbjct 21977 AAGCATCAGACTAGATGAAAAA-GAAAAGGTAATAAATCCATTGAACCAACTCCAATAAT 21919 Query 1734 AATGACTACAAATGAAGACATAACTAAAGTTAGAAT 1769 |||||| | ||||||| | |||| || ||||| Sbjct 21918 AATGACATCCAATGAAGGTACAACTTGTGTCAGAAT 21883 >seq112444 Length=40188 Score = 123 bits (136), Expect = 8e-25 Identities = 142/186 (76%), Gaps = 5/186 (3%) Strand=Plus/Plus Query 1640 AAGTAAACCAATTCAAAGCCA-TATGTTCAGGTCAAACAATTAGAATTGACCAAAAAGGT 1698 ||||||||||||| ||||| | |||| ||||| |||| |||||| | |||| |||||| Sbjct 11179 AAGTAAACCAATTTAAAGCAATTATG-TCAGGACAAAGCATTAGACTAGACCCAAAAGGG 11237 Query 1699 AAAGGAAGCAAACAAATTGAACCAACTCCTGTAATAATGACTACAAATGAAGACATAACT 1758 ||||| |||||| ||||||||||||| ||||||||||| | ||||||||||||||| Sbjct 11238 AAAGGCAGCAAATCTATTGAACCAACTCTAGTAATAATGACACCTAATGAAGACATAACT 11297 Query 1759 AAAGTTAGAATAGGATGCGAGGAAAGACCAGAACATACACAACCAATAAGAGACAGA-AT 1817 | | ||||| | || || || ||||| | || | ||||||| | | ||| | Sbjct 11298 TATTTCAGAATTGACTGTGATATCAGGCCAGAGC--ACTGAGCCAATAAAACATAGATGT 11355 Query 1818 GTTAAA 1823 |||||| Sbjct 11356 GTTAAA 11361 >seq117373 Length=15221 Score = 122 bits (134), Expect = 3e-24 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 1412 TTAAAGTCTGCCATGCTATAACTTGTGTACTAAACAGACAAGGAGGAAAAAGAAATACAA 1471 ||||||| ||||| || | ||||| || | || |||| || ||||||||||| | Sbjct 12262 TTAAAGTAATTCATGCAATGATGTGTGTGCTTAGCAAACAACTTGGTAAAAGAAATACCA 12321 Query 1472 TTCTATTTCATGGGCCAGCATCAACAGGAAAAAGTATAATTGCTCAACACATTGCAAACT 1531 | || | || || || || |||||||| |||| ||| || | | | ||| Sbjct 12322 TCTTACTAAGTGAACCTGCTAGCACTGGAAAAAGCTTAATAGCTTAAAAAACTTGTGACT 12381 Query 1532 TAGTTGGTAATGTTGGTTGCTACAATGCAGCCAATGTGAACTTTCCATTTAATGACTGTA 1591 | |||||||||||||||| |||||| || | ||||| ||||||||||| |||||||| Sbjct 12382 TGGTTGGTAATGTTGGTTATTACAATCCATCAAATGTAAACTTTCCATTCAATGACTGCT 12441 Query 1592 CAAATAAAAACTTAATATGGATTGAAGAAGCAGGAAACTT 1631 || |||||| || ||||| ||||| ||||||||||| Sbjct 12442 GCAACAAAAACACTATCTGGATAGAAGAGGCAGGAAACTT 12481 >seq58573 Length=95406 Score = 87.8 bits (96), Expect = 6e-14 Identities = 91/118 (77%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1676 CAATTAGAATTGACCAAAAAGGTAAAGGAAGCAAACAAATTGAACCAACTCCTGTAATAA 1735 ||||||||||||| ||||||| ||||||| |||| |||||||||| ||| || || | Sbjct 61979 CAATTAGAATTGATTAAAAAGGAAAAGGAAACAAAACCATTGAACCAATTCCAGTTATCA 62038 Query 1736 TGACTACAAATGAAGACATAACTAAAGTTAGAATAGGATGCGAGGAAAGACCAGAACA 1793 || || |||||| ||||||| ||| | |||| ||||| || || |||| |||| Sbjct 62039 CAACAACTAATGAAAACATAAC-AAAATAAGAACTGGATGTGAACTAAAACCACAACA 62095 >seq106666 Length=26712 Score = 86.0 bits (94), Expect = 2e-13 Identities = 147/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 2397 TACCAGGATACAAATACCTTGGTCCAGGAAACTCACTAGACCAAGGAGAACCAACTAATC 2456 |||| ||||||||||||||||| || ||||| |||| ||||||||||||||||||| | Sbjct 17578 TACCTGGATACAAATACCTTGGGCCCAGAAACACACTCAACCAAGGAGAACCAACTAACC 17519 Query 2457 CATCAGACGCCGCAGCAAAAGAACACGACGAAGCCTA-CGACAAATACATAAAATCTGGA 2515 | || || | ||| |||||||| | ||| | | || || | ||| | | Sbjct 17518 AAAGTGATCAAGCTGTCAAAAAACACGACCAGCACTATCATCTTATTCA-ACAATTAGAA 17460 Query 2516 AAAAATCCATACTTCTACTTCTCAGCAGCTGATGAAAAATTCATAAAAGAAACT-GAACA 2574 || || || ||||| |||||| |||||| |||| || ||||||||| ||| | Sbjct 17459 AATAACCCTTACTTATACTTCAATAAAGCTGACTCTGAATTTATCAAAGAAACTAGAAGA 17400 Query 2575 CGCAAAAGACTACGGAGGTAAAATTGGA 2602 || ||||||| || ||| |||||| Sbjct 17399 -GCCAAAGACTGGGGTGGTTGGATTGGA 17373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16079011779600