Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_001829.1 Length=4767 Score E Sequences producing significant alignments: (Bits) Value seq23094 250 8e-63 seq67558 149 2e-32 seq71896 125 2e-25 seq93414 96.9 1e-16 >seq23094 Length=55390 Score = 250 bits (276), Expect = 8e-63 Identities = 361/497 (73%), Gaps = 27/497 (5%) Strand=Plus/Plus Query 2886 ACAAGGTGCCGATGGAGTGGGTAATGCCTCGGGTGATTGGCATTGCGATTCCACCTGGTC 2945 ||| ||||| ||| |||| |||||| | | ||| ||| |||||| | ||| ||| Sbjct 39677 ACAGGGTGCTGATAGAGTAGGTAATTCTTTGGGAAATTAGCATTGTGGTTCTCAATGGAT 39736 Query 2946 TGAGGGCCAC---GTCACGACCACCAGCACCAGAAC-CTGGGTCTTGCCCACCTACAACA 3001 ||||||| ||||| |||| | | || | |||||||| ||| |||| ||||| Sbjct 39737 ---GGGCCACAGAGTCAC---CACCCGAAA-AGCTCTCTGGGTCTCGCCTACCTGCAACA 39789 Query 3002 ACCACCTCTACAAGCGACTCGGAG-AGAGCCT------GCAGT-CCAACACCTACAACGG 3053 ||||||||||||||| || | || ||| ||||| |||||| |||| || Sbjct 39790 ACCACCTCTACAAGCAGTTCAAAATAGTGCCACCACAGGCAGTGCCAACAACTACTTTGG 39849 Query 3054 ATTCTCCACCCCCTGGGGATACTTTGACTTCAACCGCTTCCACTGCCACTTCTCACCACG 3113 ||| | |||||||||| | |||||||||||| | ||||||||||||||| || | Sbjct 39850 CTTCAGCTCCCCCTGGGGGAATTTTGACTTCAACAGATTCCACTGCCACTTCAGCCCCTG 39909 Query 3114 TGACTGGCAGCGACTCATCAACAACAACTGGGGCATGCGACCCAAAGCCATGCGGGTCAA 3173 |||||||| |||| ||||| ||||||||||| ||||||| ||| | ||| |||| Sbjct 39910 AGACTGGCAAAGACTTATCAATAACAACTGGGGACTGCGACCTAAAAACCTGCACTTCAA 39969 Query 3174 AATCTTCAACATCCAGGTCAAGGAGGTCACGACGTCGAACGGCGAGACAACGGTGGCTAA 3233 | ||||||||||||| |||||||| ||||| | | ||| | || || || | ||||| Sbjct 39970 ACTCTTCAACATCCAAGTCAAGGAAGTCACAAGGAGGAATGTTGAAACCACAATTGCTAA 40029 Query 3234 TAACCTTACCAGCACGGTTCAGATCTTTGCGGACTCGTCGTACGAACTGCCGTACGTGAT 3293 |||||||||||||| | |||| ||||||||||||| || |||| || || ||||| Sbjct 40030 TAACCTTACCAGCATGATTCAAGTCTTTGCGGACTCAGAGTGTCAACTCCCATATGTGAT 40089 Query 3294 --GGA-TGCGGGTCAAGAGGGCAGCCTGCCTCCTTTTCCCAAC-GACGTCTTTATGGTGC 3349 ||| ||| ||||||| | |||| |||| ||||| | || || |||||| ||| Sbjct 40090 CAGGAGTGC---TCAAGAGAGGTGCCT-ACTCCCCTTCCCTCCTGATGTGTTTATGTTGC 40145 Query 3350 CCCAGTACGGCTACTGT 3366 | ||||| || || ||| Sbjct 40146 CTCAGTATGGATATTGT 40162 Score = 232 bits (256), Expect = 2e-57 Identities = 248/325 (76%), Gaps = 2/325 (1%) Strand=Plus/Plus Query 1323 GGCTGGGCGC-AAAAGAAGTTCGGGAAGAGGAACACCATCTGGCTCTTTGGGCCGGCCAC 1381 |||||||| ||||||| || || || || |||||||||||| ||| ||| |||||| Sbjct 38286 GGCTGGGCCAGAAAAGAATTT-GGCAAAAGAAACACCATCTGGGTCTATGGAAAGGCCAC 38344 Query 1382 GACGGGTAAAACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGT 1441 || || || || ||||| | ||||||| | || ||| | |||||||||||||| | || Sbjct 38345 TACTGGGAACACTAACATTGTGGAAGCCGTTGCACACACGGTGCCCTTCTACGGGTATGT 38404 Query 1442 GAACTGGACCAATGAGAACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTG 1501 ||| ||||| |||||||||||||| |||| ||||| || || || ||| | |||||||| Sbjct 38405 GAATTGGACTAATGAGAACTTTCCATTCAGTGATTGTGTGGATAAAATGCTCATCTGGTG 38464 Query 1502 GGAGGAGGGCAAGATGACGGCCAAGGTCGTAGAGAGCGCCAAGGCCATCCTGGGCGGAAG 1561 |||||| |||||||| || | | ||| || |||| || || |||||||| || ||| Sbjct 38465 GGAGGAAGGCAAGATTACCTCTATGGTGGTTGAGACAGCTAAAGCCATCCTTGGAGGAGC 38524 Query 1562 CAAGGTGCGCGTGGACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCAACTCCCGTGAT 1621 || || | |||||||| | || ||||| || | || || || ||||| || || Sbjct 38525 TAAAGTTCAGGTGGACCAGGAATGTAAGTCCTCTGTTCAAATTGATTGTACTCCAGTCAT 38584 Query 1622 CGTCACCTCCAACACCAACATGTGC 1646 | ||||||||||||||||||||||| Sbjct 38585 CATCACCTCCAACACCAACATGTGC 38609 Score = 174 bits (192), Expect = 5e-40 Identities = 225/308 (73%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 4058 TGCCTGGAATGGTCTGGCAAAACAGAGACATTTACTACCAGGGTCCCATTTGGGCCAAGA 4117 ||||||||||||||||||| || |||||||| | ||| |||||||||||||| |||| Sbjct 40854 TGCCTGGAATGGTCTGGCAGAAAAGAGACATCAATCTCCATGGTCCCATTTGGGCTAAGA 40913 Query 4118 TTCCTCATACCGATGGACACTTTCACCCCTCACCGCTGATTGGTGGGTTTGGGCTGAAAC 4177 ||||||| || ||||| |||| || ||||| || || || ||||| ||||| || |||| Sbjct 40914 TTCCTCACACAGATGGTTACTTCCATCCCTCTCCTCTTATGGGTGGCTTTGGTCTCAAAC 40973 Query 4178 ACCCGCCTCCTCAAATTTTTATCAAGAACACCCCGGTACCTGCGAATCCTGCAACGACCT 4237 | | |||||||| | | | || || ||| | || || ||||| || || | || | || Sbjct 40974 AATCTCCTCCTCAGAATATGATTAAAAACTCTCCTGTCCCTGCTAACCCCACCACCATCT 41033 Query 4238 TCAGCTCTACTC-CGGTAAACTCCTTCATTACTCAGTACAGCACTGGCCAGGTGTCGGTG 4296 ||| |||| || |||||| || || ||||| ||| | ||| || ||| | || Sbjct 41034 TCA-CTCTTGTCAAACAAAACTCTTTTATCACTCAATACTCTATTGGTCAAGTGACTGTA 41092 Query 4297 CAGATTGACTGGGAGATCCAGAAGGAGCGGTCCAAACGCTGGAACCCCGAGGTCCAGTTT 4356 | ||||| ||||| |||| ||||| | ||||| |||| || || |||| ||| Sbjct 41093 GAAATTGAATGGGAACTCCATAAGGAAAGTTCCAAGAAATGGACTCCTGAAATCCATTTT 41152 Query 4357 ACCTCCAA 4364 || ||||| Sbjct 41153 ACTTCCAA 41160 Score = 91.5 bits (100), Expect = 4e-15 Identities = 192/284 (68%), Gaps = 2/284 (1%) Strand=Plus/Plus Query 2333 AACCTGGAGCCCCTAAACCCAAGGCAAATCAACAACATCAGGACAACGCTCGGGGTCTTG 2392 || |||| | ||| | || || || |||||||||||||| || || ||| || || | Sbjct 39133 AAGCTGGCCCACCTCATCCTAAAGCTAATCAACAACATCAAGATGACTCTCATGGACTGG 39192 Query 2393 TGCTTCCGGGTTACAAATACCTCGGACCCGGCAACGGACTCGACAAGGGGGAACCCGTCA 2452 | || | || || || || || ||| || || ||| | |||||||| || || | Sbjct 39193 TTCTGGCAGGCTATAAGTATCTTATTCCCTTTAATGGTCTCTATAAGGGGGAGCCAGTTA 39252 Query 2453 ACGCAGCGGACGCGGCAGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAAGGCCG 2512 | ||| ||| || | ||||| || || || ||||| || || ||||| | | Sbjct 39253 ATTAAGCAGACAAAGCCACACTCGAACAAGAGAAAGCCTATGATCAATTCCTCAAAGAAG 39312 Query 2513 GTGACAACCCCTACCTCAAGTACAACCACGCCGACGCGGAGTTCCAGCAGCGGC-TTCAG 2571 | || || || | ||||| ||||||||| | ||| ||||||||| | | ||||| Sbjct 39313 GGGAAAATCCTTTCCTCACCTACAACCACACAGACCAAGAGTTCCAGGAAAAACTTTCAG 39372 Query 2572 GGCGACACATCGTTTGGGGGCAACCTCGGCAGAGCAGTCTTCCA 2615 | | ||| || ||||| || ||||| |||| ||||| || || Sbjct 39373 AG-GGCACTTCATTTGGTGGTAACCTTGGCAAGGCAGTGTTTCA 39415 >seq67558 Length=25472 Score = 149 bits (164), Expect = 2e-32 Identities = 177/235 (75%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 4058 TGCCTGGAATGGTCTGGCAAAACAGAGACATTTA-CTACCAGGGTCCCATTTGGGCCAAG 4116 ||||||||||||||||| | |||||||||| || |||| ||| || || | ||||||| Sbjct 10650 TGCCTGGAATGGTCTGGTAGGACAGAGACATCTATCTACAAGG-TCTGATGTAGGCCAAG 10592 Query 4117 ATTCCTCATACCGATGGACACTTTCACCCCTCACCGCTGATTGGTGGGTTTGGGCTGAAA 4176 ||||||||| | ||||||||||| ||| ||||| ||| | ||||| ||||| |||||| Sbjct 10591 ATTCCTCATGCTGATGGACACTTCCACAATTCACCTCTGCTGGGTGGTTTTGGACTGAAA 10532 Query 4177 CACCCGCCTCCTCAAATTTTTATCAAGAACACCCCGGTACCTGCGAATCCTGCAACGACC 4236 | || |||||||| | | ||||||||||| || | ||||| || || || | | Sbjct 10531 AATCCTCCTCCTCAGAACATGATCAAGAACACTCCTATGCCTGCTAACTCTCCAGTGGCT 10472 Query 4237 TTCAGCTCTACTCCGGTA-AACTCCTTCATTACTCAGTACAGCACTGGCCAGGTG 4290 |||| |||| || | ||||| ||||| || |||||| ||||| || ||| Sbjct 10471 TTCA-CTCTGGTCAAACAGAACTCTTTCATCACCCAGTACTCAACTGGTCAAGTG 10418 >seq71896 Length=30598 Score = 125 bits (138), Expect = 2e-25 Identities = 222/320 (69%), Gaps = 4/320 (1%) Strand=Plus/Plus Query 4060 CCTGGAATGGTCTGGCAAAACAGAGACATTTACTACCAGGGTCCCATTTGGGCCAAGATT 4119 ||| ||||||||||| | ||||||| | ||| || || || ||||| ||||| Sbjct 11019 CCTTGAATGGTCTGGGATGACAGAGATGTCTACCTGCAAAAACCTATCTGGGCTAAGATC 11078 Query 4120 CCTCATACCGATGGACACTTTCACCCCTCACCGCTGATTGGTGGGTTTGGGCTGAAACAC 4179 ||||| | ||| ||||||| ||||| || || || || ||||| ||| |||||| | Sbjct 11079 CCTCACATTGATAGACACTTCCACCCTTCGCCTCTCATGGGTGGATTTTTACTGAAAAAG 11138 Query 4180 CCGCCTCCTCAAATTTTTATCAAGAACACCCCGGTACCTGCGAATCCTGCAACGACCTTC 4239 | |||| ||| || | ||||||||||||| | | ||||| || ||| | | ||| Sbjct 11139 CTTCCTCTTCAGATCATGATCAAGAACACCCAGATGCCTGCTAACCCTCTGGTGGCTTTC 11198 Query 4240 AGCTCTACTCCG-GTAAACTCCTTCATTACTCAGTACAGCACTGGCCAGGTGTCGGTGCA 4298 | | | | || | |||||| ||||| || ||||| ||| | || || ||| | Sbjct 11199 ACCCCCA-TCAGACAAAACTCTTTCATCACCAAGTACTCTACTAGTCAATTGGTGGTAAA 11257 Query 4299 GATTGACTGGGAGATCCAGAAGGAGCGGTCCAAACGCTGGAACCCCGAGGTCCAGTTTAC 4358 |||||| || || ||||||||||| ||||| ||||| || || ||| ||| ||| Sbjct 11258 GATTGAATGAGAACTCCAGAAGGAGTCTTCCAAGAAGTGGAATCCTGAAGTCTAGTCTAC 11317 Query 4359 CTCCAACTACGG--ACAGCA 4376 |||| || || |||||| Sbjct 11318 TTCCAGCTTTGGCAACAGCA 11337 >seq93414 Length=10396 Score = 96.9 bits (106), Expect = 1e-16 Identities = 176/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 1392 ACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTGAACTGGACC 1451 || ||||| || ||||||||||| ||| | || || | | | ||||| |||| |||||| Sbjct 1407 ACAAACATTGCAGAAGCCATCGCACACACTGTACCTTCCCATGGCTGTATGAATTGGACC 1466 Query 1452 AATGAGAACTTTCCGTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAGGAGGGC 1511 ||||| ||| |||| ||| | || || || || | ||| | ||| ||| ||| || | | Sbjct 1467 AATGA-AACCTTCCCTTCCATGACTGTGTAGATGAAATGATCATCCGGTAGGAAGAAGAC 1525 Query 1512 AAGATGACGGCCAAGGTCGTAGAGAGCGCCAAGGCCATCCTGGGCGGAAGCAAGGTGCGC 1571 | ||||| || || || | || | | || | ||| || | ||| || || || Sbjct 1526 ACAATGACTGCTAAAATCATGGAAATGACTAAAGTCATTCTCAGTGGAGCTAAAGTTCGT 1585 Query 1572 GTGGACCAAAAGTGCAAGTCATCGGCCCAGATCGACCCAACTCCCGTGATCGTCACCTCC 1631 ||||| || || |||||||| || | || | || | || || ||||| |||| || Sbjct 1586 GTGGATCATAAATGCAAGTCCTCTGTTCAACTGGAGTCTACACCAGTGATTATCACTTCT 1645 Query 1632 AACACCAACATGTGC 1646 |||| |||||||| Sbjct 1646 AACA-GGACATGTGC 1659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15096405504180