Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq23094 288 3e-74 seq93414 147 7e-32 seq67558 132 1e-27 seq111540 80.6 8e-12 >seq23094 Length=55390 Score = 288 bits (318), Expect = 3e-74 Identities = 517/758 (68%), Gaps = 13/758 (2%) Strand=Plus/Plus Query 2800 CAACCCCCGCTGCTGTGGGACCTACTACAATGGCTTCAGGCGGTGGCGCACCAATGGCAG 2859 || ||||| || | ||||| || || ||||| ||| ||||| | |||||||| Sbjct 39610 CAGCCCCCACTAATTTGGGATCTGGTATCATGGCAGAAGGAGGTGGAGTACCAATGGGCA 39669 Query 2860 ACAATAACGAAGGCGCCGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATTCCA 2919 | ||| | | || || || |||| |||||| | | ||||||| |||||| | ||| Sbjct 39670 ATAATCAACAGGGTGCTGATAGAGTAGGTAATTCTTTGGGAAATTAGCATTGTGGTTCTC 39729 Query 2920 CATGGCTGGGCGACAGAGTCATCACCANNNNNNNNNNNNNNNNNNNNNTGCCCACCTACA 2979 |||| ||||| ||||||||| |||| ||| |||| || Sbjct 39730 AATGGATGGGCCACAGAGTCACCACCCGAAAAGCTCTCTGGGTCTC---GCCTACCTGCA 39786 Query 2980 ATAACCACCTCTACAAGCAAATCTCCA--GTGCTTCAACGGGGGCCAGCAACGACAACCA 3037 | ||||||||||||||||| || | |||| | || || || | |||| | Sbjct 39787 ACAACCACCTCTACAAGCAGTTCAAAATAGTGCCACCACAGG------CAGTGCCAACAA 39840 Query 3038 CTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGATTTCAACAGATTCCACTGCCACTT 3097 |||||| |||| |||| ||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 39841 CTACTTTGGCTTCAGCTCCCCCTGGGGGAATTTTGACTTCAACAGATTCCACTGCCACTT 39900 Query 3098 TTCACCACGTGACTGGCAGCGACTCATCAACAACAATTGGGGATTCCGGCCCAAGAGACT 3157 || | |||||||| |||| ||||| ||||| |||||| | || || || | || Sbjct 39901 CAGCCCCTGAGACTGGCAAAGACTTATCAATAACAACTGGGGACTGCGACCTAAAAACCT 39960 Query 3158 CAACTTCAAACTCTTCAACATCCAAGTCAAGGAGGTCACGACGAATGATGGCGTCACAAC 3217 ||||||||||||||||||||||||||||||| ||||| | || ||| | || || Sbjct 39961 GCACTTCAAACTCTTCAACATCCAAGTCAAGGAAGTCACAAGGAGGAATGTTGAAACCAC 40020 Query 3218 CATCGCTAATAACCTTACCAGCACGGTTCAAGTCTTCTCGGACTCGGAGTACCAGCTTCC 3277 || ||||||||||||||||||| | |||||||||| ||||||| |||| || || || Sbjct 40021 AATTGCTAATAACCTTACCAGCATGATTCAAGTCTTTGCGGACTCAGAGTGTCAACTCCC 40080 Query 3278 GTACGTCCTCGGCTCTGCGCACCAGGGCTGCCTCCCTCCGTTCCCGGCGGACGTGTTCAT 3337 || || || | ||| || || | ||||| | || ||||| | || ||||| || Sbjct 40081 ATATGTGATCAGGAGTGCTCAAGAGAGGTGCCTACTCCCCTTCCCTCCTGATGTGTTTAT 40140 Query 3338 GATTCCGCAATACGGCTACCTGACGCTCAACAATG-GCAGCCAAGCCGTGGGACGTTCAT 3396 | | || || || || || || | |||||| | ||| | || | | Sbjct 40141 GTTGCCTCAGTATGGATATTGTACTTTGGACAATGATGGGAAAAGTTTAGAGAGGAGC-G 40199 Query 3397 CCTTTTACTGCCTGGAATATTTCCCTTCTCAGATGCTGAGAACGGGCAACAACTTTACCT 3456 | || |||| || ||| |||| ||| || || |||||| ||| ||||||||| | | Sbjct 40200 CATTCTACTTTCTAGAACATTTTCCTAACCAAATATTGAGAATGGGTAACAACTTTGCAT 40259 Query 3457 TCAGCTACACCTTTGAGGAAGTGCCTTTCCACAGCAGCTACGCGCACAGCCAGAGCCTGG 3516 | ||| | ||||| || || || || |||| | || | |||||| ||| Sbjct 40260 TTTCCTATGCTTTTGAATCTGTCCCCTTTCATAGCATGTGGATACATAATCAGAGCTTGG 40319 Query 3517 ACCGGCTGATGAATCCTCTCATCGACCAATACCTGTAT 3554 | | |||||||||| | || || ||||| |||||| Sbjct 40320 ATAGATTGATGAATCCATTGATTGATCAATATCTGTAT 40357 Score = 248 bits (274), Expect = 3e-62 Identities = 327/448 (73%), Gaps = 4/448 (1%) Strand=Plus/Plus Query 1286 GGCTGGGCCCAGAAAAGG-TTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCGGCCAC 1344 ||||||||| ||||||| || || || | |||||||||||| | | ||| |||||| Sbjct 38286 GGCTGGGCC-AGAAAAGAATTTGGCAAAAGAAACACCATCTGGGTCTATGGAAAGGCCAC 38344 Query 1345 CACGGGCAAGACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGT 1404 || || || || ||||| | ||||||| | || ||| | |||||||||||||| | || Sbjct 38345 TACTGGGAACACTAACATTGTGGAAGCCGTTGCACACACGGTGCCCTTCTACGGGTATGT 38404 Query 1405 CAACTGGACCAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTG 1464 || ||||| |||||||||||||| |||| |||||| || || || ||| | |||||||| Sbjct 38405 GAATTGGACTAATGAGAACTTTCCATTCAGTGATTGTGTGGATAAAATGCTCATCTGGTG 38464 Query 1465 GGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAG 1524 |||||| |||||||| || | | ||| || ||| | || || ||||| || || || || Sbjct 38465 GGAGGAAGGCAAGATTACCTCTATGGTGGTTGAGACAGCTAAAGCCATCCTTGGAGG-AG 38523 Query 1525 C-AAGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGA 1583 | || || | |||||||| | || ||||| || | || || || || || || | Sbjct 38524 CTAAAGTTCAGGTGGACCAGGAATGTAAGTCCTCTGTTCAAATTGATTGTACTCCAGTCA 38583 Query 1584 TCGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGC 1643 || ||||||||||||||||||||||| | || | || |||||| | | ||| |||| Sbjct 38584 TCATCACCTCCAACACCAACATGTGCTACATGGTGGATCGGAACACTATGATCTTTGAGC 38643 Query 1644 ACCAGCAGCCGTTGCAGGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCATG 1703 | ||||| ||| || |||| ||||| |||| ||| | || ||| Sbjct 38644 ATAAGCAGTTGTTACAAGACCACATGTTTCAATTCATGCTCGTGGAGAGACTTCCTGATG 38703 Query 1704 ACTTTGGCAAGGTGACAAAGCAGGAAGT 1731 |||||||||||||||||||| |||| || Sbjct 38704 ACTTTGGCAAGGTGACAAAGGAGGAGGT 38731 Score = 194 bits (214), Expect = 5e-46 Identities = 294/411 (72%), Gaps = 12/411 (3%) Strand=Plus/Plus Query 4029 CCTGGCATGGTGTGGCAAGATAGAGACGTGTACCTGCAGGGTCCCATTTGGGCCAAAATT 4088 ||||| ||||| ||||| | |||||| | | || || |||||||||||||| || ||| Sbjct 40856 CCTGGAATGGTCTGGCAGAAAAGAGACATCAATCTCCATGGTCCCATTTGGGCTAAGATT 40915 Query 4089 CCTCACACAGATGGACACTTTCACCCGTCTCCTCTTATGGGCGGCTTTGGACTCAAGAAC 4148 |||||||||||||| |||| || || |||||||||||||| |||||||| ||||| | Sbjct 40916 CCTCACACAGATGGTTACTTCCATCCCTCTCCTCTTATGGGTGGCTTTGGTCTCAAACAA 40975 Query 4149 CCGCCTCCTCAGATCCTCATCAAAAACACGCCTGTTCCTGCGAATCCTCCGGCGGAGTTT 4208 | |||||||||| | || |||||| | ||||| ||||| || | || | | | Sbjct 40976 TCTCCTCCTCAGAATATGATTAAAAACTCTCCTGTCCCTGCTAA--CCCCACCACCATCT 41033 Query 4209 TCA-GCT--ACAAAGTTTGCTTCATTCATCACCCAATACTCCACAGGACAAGTGAGTGTG 4265 ||| || |||| | || || ||||| |||||||| | || ||||||| ||| Sbjct 41034 TCACTCTTGTCAAACAAAAC-TCTTTTATCACTCAATACTCTATTGGTCAAGTGACTGTA 41092 Query 4266 GAAATTGAATGGGAGCTGCAGAAAGAAAACAGCAAGCGCTGGAATCCCGAAGTGCAGTAC 4325 |||||||||||||| || || || |||| |||| |||| ||| ||| | || | Sbjct 41093 GAAATTGAATGGGAACTCCATAAGGAAAGTTCCAAGAAATGGACTCCTGAAATCCATTTT 41152 Query 4326 ACATCCAATTATGCAAAATCTGCCAACGTTGATTTTACTGTGGACAACAATGGA-CTTTA 4384 || ||||||| ||| || || | |||| || |||||||| | | || Sbjct 41153 ACTTCCAATTTCAGAAACACTATTGACTTATCTTTTGCT---CCCAACAATGAAGGTGTA 41209 Query 4385 TACTG--AGCCTCGCCCCATTGGCACCCGTTACCTTACCCGTCCCCTGTAA 4433 ||||| | ||||| |||||||| ||| | |||||||||| |||| | ||| Sbjct 41210 TACTGTAAACCTCGTCCCATTGGTACCTGATACCTTACCCTTCCCATCTAA 41260 Score = 82.4 bits (90), Expect = 2e-12 Identities = 183/275 (67%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 2316 CCCAAAGCCAACCAGCAAAAGCAGGACGACGGCCGGGGTCTGGTGCTTCCTGGCTACAAG 2375 || ||||| || || ||| | || || ||| | || ||||| || | ||||| ||| Sbjct 39150 CCTAAAGCTAATCAACAACATCAAGATGACTCTCATGGACTGGTTCTGGCAGGCTATAAG 39209 Query 2376 TACCTCGGACCCTTCAACGGACTCGACAAGGGGGAGCCCGTCAACGCGGCGGACGCAGCG 2435 || || ||||| || || ||| | ||||||||||| || || || ||| ||| Sbjct 39210 TATCTTATTCCCTTTAATGGTCTCTATAAGGGGGAGCCAGTTAATTAAGCAGACAAAGCC 39269 Query 2436 GCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCAAAGCGGGTGACAATCCGTACCTG 2495 | ||||| || || || ||||| || || ||||||| || || ||||| | ||| Sbjct 39270 ACACTCGAACAAGAGAAAGCCTATGATCAATTCCTCAAAGAAGGGGAAAATCCTTTCCTC 39329 Query 2496 CGGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTCTGCAAGAAGATACGTCTTTTGGG 2555 || |||||| | ||| ||||| ||||| || ||| | || || ||||| Sbjct 39330 ACCTACAACCACACAGACCAAGAGTTCCAGGAAAAACTTTCAGAGGGCACTTCATTTGGT 39389 Query 2556 GGCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAA 2590 || ||||| || ||||| || || | ||||| Sbjct 39390 GGTAACCTTGGCAAGGCAGTGTTTCAAGGAAAGAA 39424 >seq93414 Length=10396 Score = 147 bits (162), Expect = 7e-32 Identities = 235/332 (71%), Gaps = 4/332 (1%) Strand=Plus/Plus Query 1348 GGGCAAGACCAACATCGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAA 1407 |||| |||| ||||| || ||||||||||| ||| | || || | | | ||||| | || Sbjct 1400 GGGCCAGACAAACATTGCAGAAGCCATCGCACACACTGTACCTTCCCATGGCTGTATGAA 1459 Query 1408 CTGGACCAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGA 1467 ||||||||||| ||| |||||||| |||| || || || | ||| | ||| ||| ||| Sbjct 1460 TTGGACCAATGA-AACCTTCCCTTCCATGACTGTGTAGATGAAATGATCATCCGGTAGGA 1518 Query 1468 GGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGC-A 1526 || | || ||||| || || || |||| | || | ||||||| | || ||| | Sbjct 1519 AGAAGACACAATGACTGCTAAAATCATGGAAATGACTAAAGTCATTCTCAGTGG-AGCTA 1577 Query 1527 AGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCG 1586 | || || ||||| || || |||||||| || | || | || | || || ||||| Sbjct 1578 AAGTTCGTGTGGATCATAAATGCAAGTCCTCTGTTCAACTGGAGTCTACACCAGTGATTA 1637 Query 1587 TCACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACC 1646 |||| || |||| |||||||| ||| || ||||| | ||| || || || || Sbjct 1638 TCACTTCTAACA-GGACATGTGCCGTGTGGAGGATGGGAATACCACGACATTTGAATACA 1696 Query 1647 AGCAGCCGTTGCAGGACCGGATGTTCAAATTT 1678 |||||| |||| | ||| | ||||| |||||| Sbjct 1697 AGCAGCTGTTGGAAGACTGCATGTTTAAATTT 1728 >seq67558 Length=25472 Score = 132 bits (146), Expect = 1e-27 Identities = 172/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 4029 CCTGGCATGGTGTGGCAAGATAGAGACGTGTACCTGCAGGGTCCCATTTGGGCCAAAATT 4088 ||||| ||||| ||| | || |||||| | || || || |||| || | |||||| ||| Sbjct 10648 CCTGGAATGGTCTGGTAGGACAGAGACATCTATCTACAAGGTCTGATGTAGGCCAAGATT 10589 Query 4089 CCTCACACAGATGGACACTTTCACCCGTCTCCTCTTATGGGCGGCTTTGGACTCAAGAAC 4148 ||||| | ||||||||||| ||| || ||||| |||| || |||||||| || || Sbjct 10588 CCTCATGCTGATGGACACTTCCACAATTCACCTCTGCTGGGTGGTTTTGGACTGAAAAAT 10529 Query 4149 CCGCCTCCTCAGATCCTCATCAAAAACACGCCTGTTCCTGCGAATCCTCCGGCGGAGTT- 4207 || |||||||||| | | ||||| ||||| ||| | ||||| || |||| | || || Sbjct 10528 CCTCCTCCTCAGAACATGATCAAGAACACTCCTATGCCTGCTAACTCTCCAGTGGCTTTC 10469 Query 4208 -TTCAGCTACAAAGTTTGCTTCATTCATCACCCAATACTCCACAGGACAAGTGA 4260 || | | |||| | || ||||||||||| ||||| || || ||||||| Sbjct 10468 ACTCTGGT-CAAACAGAAC-TCTTTCATCACCCAGTACTCAACTGGTCAAGTGA 10417 >seq111540 Length=9601 Score = 80.6 bits (88), Expect = 8e-12 Identities = 221/329 (67%), Gaps = 20/329 (6%) Strand=Plus/Minus Query 3038 CTACTTCGGCTACAGCACCCC-CTGGGGGTATTTTGATTTCAACAGATTCCACTGCCACT 3096 |||| || | || ||||| | |||||| ||| |||||||||||||||| | |||| Sbjct 9107 CTACCTCAGTTATAGCACAACTCTGGGGATATATTGATTTCAACAGATTATAGCATCACT 9048 Query 3097 TTTCACCACGTGACTGGCAGCGACTCATCAACAACAATTGGGGATTCCGGCCCAAGAGAC 3156 || | |||||||| |||||||||||| | |||||| || | ||||| | Sbjct 9047 GGAGTCCTAGAGACTGGCAAAGACTCATCAACAGCTGCTGGGGACTCAGACCCAAATCCC 8988 Query 3157 TCAACTTCAAACTCTTCAACATCCAAGTCAAGGAGGTCACGACGAAT--GATGGCGTCAC 3214 ||| |||| ||||||||||||| |||| || || | | |||| ||||| | Sbjct 8987 TCAGTGTCAAGGTCTTCAACATCCATATCAAAGAAGTTATG--GAATAAAATGGCACAAT 8930 Query 3215 AACCATCGCTAATAACCTTACCAGCACGGTTCAAGTCTTCTCGGACTCGGAG---TACCA 3271 |||| || || ||||| || ||| | ||||| || | || |||| | || Sbjct 8929 GACCACTGCAAACAACCTGACATCCACTATCCAAGTGTTTGCAGA---GGAGAGCTGTCA 8873 Query 3272 GCTTCCGTACGTCCTCGG---CTCTGCGCACCAGGGCTGCCTC-CCTCCGTTCCCGGCGG 3327 |||| | || ||||| || | || || |||| ||| || |||| || || || Sbjct 8872 GCTTTCTTATGTCCTAGGGAACACT--ACAGAAGGG-TGCTTCTCCTC--TTTCCTGCAT 8818 Query 3328 ACGTGTTCATGATTCCGCAATACGGCTAC 3356 |||||||||| | | |||||| || ||| Sbjct 8817 CCGTGTTCATGTTCCTGCAATATGGGTAC 8789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14940081778545