Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq23094 159 1e-35 seq111540 89.7 2e-14 seq33192 78.8 3e-11 >seq23094 Length=55390 Score = 159 bits (176), Expect = 1e-35 Identities = 289/414 (70%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 3040 TAACATGGCAGAGGGAGGAAGCGGAGCTATGGGCGACTCTGCAGGGGGTGCCGATGGAGT 3099 || ||||||||| ||||| | | | | |||||| | | | |||||| ||| |||| Sbjct 39635 TATCATGGCAGAAGGAGGTGGAGTACCAATGGGCAATAATCAACAGGGTGCTGATAGAGT 39694 Query 3100 GGGTAATGCCTCAGGAAATTGGCATTGCGATTCCCAATGGCTGGGAGACACAGTCATTAC 3159 |||||| | | ||||||| |||||| | ||| |||||| |||| ||| ||||| || Sbjct 39695 AGGTAATTCTTTGGGAAATTAGCATTGTGGTTCTCAATGGATGGGCCACAGAGTCACCAC 39754 Query 3160 CAAGACTACAAGAAC-CTGGGTCCTGCCAAGCTACAACAACCACATGTACCAAGCCATCA 3218 | | | ||| | ||||||| ||| | || |||||||||| | ||| |||| | Sbjct 39755 C----CGAAAAGCTCTCTGGGTCTCGCCTACCTGCAACAACCACCTCTAC-AAGCAGTTC 39809 Query 3219 CAAGCGGAACAAACCCAGACTCAAATACC--CAA-TATGCTGGATACAGCACCCCCTGGG 3275 || | | | | ||| | | | || ||| || ||| | |||| ||||||||| Sbjct 39810 AAAATAGTGCCACCACAGGC---AGTGCCAACAACTACTTTGGCTTCAGCTCCCCCTGGG 39866 Query 3276 GGTACTTTGATTTCAACAGATTCCACTGCCATTTCTCTCCAAGAGACTGGCAGAGACTCA 3335 || | ||||| |||||||||||||||||||| ||| || |||||||||| ||||| | Sbjct 39867 GGAATTTTGACTTCAACAGATTCCACTGCCACTTCAGCCCCTGAGACTGGCAAAGACTTA 39926 Query 3336 TCAACAACCATTGGGGGATTAGACCGAAAGCACTCAAATTCAAGATATTCAATGTGCAAG 3395 |||| ||| | ||||| | |||| ||| || | ||||| | ||||| | |||| Sbjct 39927 TCAATAACAACTGGGGACTGCGACCTAAAAACCTGCACTTCAAACTCTTCAACATCCAAG 39986 Query 3396 TTAAAGAAGTCACGACGCAAGACCAGACAAA-GACTATTGCTAACAACCTTACC 3448 | || |||||||| | | | || ||| || |||||||| ||||||||| Sbjct 39987 TCAAGGAAGTCAC-AAGGAGGAATGTTGAAACCACAATTGCTAATAACCTTACC 40039 Score = 152 bits (168), Expect = 2e-33 Identities = 239/341 (70%), Gaps = 1/341 (0%) Strand=Plus/Plus Query 1505 GGATGGGTGAAAAGAGAATTCAACAAAAGAAATGCCATATGGCTCTACGGACCTGCGACC 1564 || |||| | || |||||| ||||||||| |||| ||| |||| ||| || || Sbjct 38286 GGCTGGGCCAGAAAAGAATTTGGCAAAAGAAACACCATCTGGGTCTATGGAAAGGCCACT 38345 Query 1565 ACCGGAAAGACCAACATAGCCGAGGCTATTGCCCATGCTGTACCCTTCTATGGCTGTGTT 1624 || || || || ||||| | || || |||| || | || |||||||| || | ||| Sbjct 38346 ACTGGGAACACTAACATTGTGGAAGCCGTTGCACACACGGTGCCCTTCTACGGGTATGTG 38405 Query 1625 AACTGGACTAATGAGAACTTCCCATTTAATGACTGCGTTGATAAAATGCTTATATGGTGG 1684 || ||||||||||||||||| ||||| | ||| || || ||||||||||| || |||||| Sbjct 38406 AATTGGACTAATGAGAACTTTCCATTCAGTGATTGTGTGGATAAAATGCTCATCTGGTGG 38465 Query 1685 GAGGAGGGAAAAATGACCAATAAAGTAGTGGAATCCGCAAAAGCGATACTgggggggTCT 1744 ||||| || || || ||| || || || || | || ||||| || || || || || Sbjct 38466 GAGGAAGGCAAGATTACCTCTATGGTGGTTGAGACAGCTAAAGCCATCCTTGGAGGAGCT 38525 Query 1745 GCTGTACGAGTTGATCAAAAGTGTAAGGGGTCTGTTTGTATTGAACCTACTCCTGTAATA 1804 || | || || || | |||||| |||||| ||||| |||||| || || Sbjct 38526 AAAGTTCAGGTGGACCAGGAATGTAAGTCCTCTGTTCAAATTGATTGTACTCCAGTCATC 38585 Query 1805 ATTACCAGTAATACTGATATGTGCATGATTGTGGAT-GGAA 1844 || ||| || || | |||||| || |||||| |||| Sbjct 38586 ATCACCTCCAACACCAACATGTGCTACATGGTGGATCGGAA 38626 Score = 118 bits (130), Expect = 3e-23 Identities = 212/306 (69%), Gaps = 14/306 (5%) Strand=Plus/Plus Query 4244 CCTGGCATGGTCTGGCAGAACAGAGATATTTACCTGCAGGGTCCTATATGGGCTAAAATA 4303 ||||| |||||||||||||| ||||| || | || || ||||| || |||||||| || Sbjct 40856 CCTGGAATGGTCTGGCAGAAAAGAGACATCAATCTCCATGGTCCCATTTGGGCTAAGATT 40915 Query 4304 CCCAAAACAGATGGGAAACCCCATCCTTCTCCAAACCTGGGAGGTTTTGGTCTCCATAAT 4363 || | |||||||| | |||||| ||||| |||| || ||||||||| | | Sbjct 40916 CCTCACACAGATGGTTACTTCCATCCCTCTCCTCTTATGGGTGGCTTTGGTCTCAAACAA 40975 Query 4364 CCACCTCCCCAGGTCTTTATTAAAAATACTCCTGTTCCTGC-AGATCCTCCACTAGAGT- 4421 | ||||| ||| | |||||||| ||||||| ||||| | || |||| | | Sbjct 40976 TCTCCTCCTCAGAATATGATTAAAAACTCTCCTGTCCCTGCTAACCCCACCACCATCTTC 41035 Query 4422 ----ATGTAAATCAGAAGTGGAATTCTTACATTACACAGTATTCAACAGGGC-AGTGTAC 4476 ||| || || || |||| || || || || || | || | |||| || Sbjct 41036 ACTCTTGTCAAACA------AAACTCTTTTATCACTCAATACTCTATTGGTCAAGTG-AC 41088 Query 4477 TGTAGAAATGGTCTGGGAACTCAGAAAAGAAAACTCCAAGAGATGGAACCCTGAGATCCA 4536 ||||||||| | ||||||||| || |||| ||||||| ||||| ||||| ||||| Sbjct 41089 TGTAGAAATTGAATGGGAACTCCATAAGGAAAGTTCCAAGAAATGGACTCCTGAAATCCA 41148 Query 4537 ATTTAC 4542 ||||| Sbjct 41149 TTTTAC 41154 >seq111540 Length=9601 Score = 89.7 bits (98), Expect = 2e-14 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 3271 CTGGGGGTACTTTGATTTCAACAGATTCCACTGCCATTTCTCTCCAAGAGACTGGCAGAG 3330 |||||| || |||||||||||||||| | || | ||| ||||||||||| || Sbjct 9085 CTGGGGATATATTGATTTCAACAGATTATAGCATCACTGGAGTCCTAGAGACTGGCAAAG 9026 Query 3331 ACTCATCAACAACCATTGGGGGATTAGACCGAAAGCACTCAAATTCAAGATATTCAATGT 3390 ||||||||||| | ||||| | ||||| ||| | |||| ||||| | ||||| | Sbjct 9025 ACTCATCAACAGCTGCTGGGGACTCAGACCCAAATCCCTCAGTGTCAAGGTCTTCAACAT 8966 Query 3391 GCAAGTTAAAGAAGTCACGACGCAAGACCAGACAAAGACTATTGCTAACAACCTTACCTC 3450 || | |||||||| | | || | |||| ||| | ||| |||||||| || || Sbjct 8965 CCATATCAAAGAAGTTATGGAATAAAATGGCACAATGACCACTGCAAACAACCTGACATC 8906 Query 3451 TACAATCCA 3459 || ||||| Sbjct 8905 CACTATCCA 8897 >seq33192 Length=73296 Score = 78.8 bits (86), Expect = 3e-11 Identities = 105/146 (72%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 1604 GTACCCTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGACTGCGTT 1663 ||||||||||| |||||| |||| || || | | |||||||||||||| ||| | Sbjct 33386 GTACCCTTCTACTGCTGTGGGAACTAGATCAACAAAAGTTTCCCATTTAATGATTGCATG 33445 Query 1664 GATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGACCAATAAAGTAGTGGAATCCGCA 1723 | |||||| | || ||||| | ||||| |||||||| || | | |||| | | Sbjct 33446 GCCAAAATGATCATTTGGTGAGGGGAGGACAAAATGACTAACACGATTATGGAGGCTGGC 33505 Query 1724 AAAGCGATACTgggggggTCTGCTGT 1749 ||||| ||| ||||||| || |||| Sbjct 33506 AAAGCAATATTGGGGGGCTCCTCTGT 33531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16260857746155