Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq23094 268 3e-68 seq93414 187 7e-44 seq111540 123 7e-25 >seq23094 Length=55390 Score = 268 bits (296), Expect = 3e-68 Identities = 472/687 (69%), Gaps = 33/687 (5%) Strand=Plus/Plus Query 1011 AGAAATACATGGCGCTCGTCAACTGGCTCGTGGAGCACGGCATCACTTCCGAGAAGCAGT 1070 ||| |||||||| ||| || || ||||| |||||||| ||| || || ||||||| Sbjct 38016 AGAGATACATGGAGCTTGTAAATTGGCTTGTGGAGCAG-----CACCTCTGAAAAGCAGT 38070 Query 1071 GGATCCAGGAAAATCAGGAGAGCTACCTCTCCTTCAACTCCACCGGCAACTCTCGGAGCC 1130 |||| ||||||||||| || || |||| | | ||||| |||| | || Sbjct 38071 GGATTATTGAAAATCAGGAAAGTTATCTCTGTCACCAATCCACTAGCAATGCAGCCAGGA 38130 Query 1131 AGATCAAGGCCGCGCTCGACAACGCGACCAAAATTATGAGTCTGACAAAAAGCGCGGTGG 1190 |||| || | || || ||||| || | |||||||||| |||||| |||| || | | Sbjct 38131 AGATTAAAGTTGCTCTGGACAATGCTTCTAAAATTATGAATCTGACCAAAAATGCAGATG 38190 Query 1191 ACTACCTCGTGGGGAGC-------TCCGTTCCCGAGGACATTTCAAAAAACAGAATCTGG 1243 | ||||| | || || ||| || ||||| | | ||| |||| Sbjct 38191 ATTACCTTATCCCGAAAGAATTTGTCAGTTTT-GACAACATTAAACAGAACCATATCTAT 38249 Query 1244 CAAATTTTTGAGATGAATGGCTACGACCCGGCCTACGCGGGATCCATCCTCTACGGCTGG 1303 || ||| ||| |||| |||| |||| ||||| |||||| Sbjct 38250 TGGATCTTTAAGA---ATGGATACG---------------GATCTATCCTGGTAGGCTGG 38291 Query 1304 TGTCAGCGCTCC-TTCAACAAGAGGAACACCGTCTGGCTCTACGGACCCGCCACGACCGG 1362 | ||| || ||| || |||||| ||||| |||| ||| ||||| || || Sbjct 38292 -GCCAGAAAAGAATTTGGCAAAAGAAACACCATCTGGGTCTATGGAAAGGCCACTACTGG 38350 Query 1363 CAAGACCAACATCGCGGAGGCCATCGCCCACACTGTGCCCTTTTACGGCTGCGTGAACTG 1422 || || ||||| | ||| ||| | || ||||| |||||||| ||||| | ||||| || Sbjct 38351 GAACACTAACATTGTGGAAGCCGTTGCACACACGGTGCCCTTCTACGGGTATGTGAATTG 38410 Query 1423 GACCAATGAAAACTTTCCCTTTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAGGA 1482 ||| ||||| |||||||| || | ||| |||||||| ||||||||||| ||||||||||| Sbjct 38411 GACTAATGAGAACTTTCCATTCAGTGATTGTGTGGATAAAATGCTCATCTGGTGGGAGGA 38470 Query 1483 GGGAAAGATGACCAACAAGGTGGTTGAATCCGCCAAGGCCATCCTGGGGGGCTCAAAGGT 1542 || ||||| ||| | ||||||||| | || || |||||||| || || | || || Sbjct 38471 AGGCAAGATTACCTCTATGGTGGTTGAGACAGCTAAAGCCATCCTTGGAGGAGCTAAAGT 38530 Query 1543 GCGGGTCGATCAGAAATGTAAATCCTCTGTTCAAATTGATTCTACCCCTGTCATTGTAAC 1602 | ||| || ||| ||||||| ||||||||||||||||||| ||| || ||||| | || Sbjct 38531 TCAGGTGGACCAGGAATGTAAGTCCTCTGTTCAAATTGATTGTACTCCAGTCATCATCAC 38590 Query 1603 TTCCAATACAAACATGTGTGTGGTGGTGGATGGGAATTCCACGACCTTTGAACACCAGCA 1662 ||||| || |||||||| |||||||| |||| | | || |||||| || |||| Sbjct 38591 CTCCAACACCAACATGTGCTACATGGTGGATCGGAACACTATGATCTTTGAGCATAAGCA 38650 Query 1663 GCCGCTGGAGGACCGCATGTTCAAATT 1689 | | | | |||| |||||| |||| Sbjct 38651 GTTGTTACAAGACCACATGTTTCAATT 38677 Score = 206 bits (228), Expect = 8e-50 Identities = 447/662 (68%), Gaps = 23/662 (3%) Strand=Plus/Plus Query 2767 TTTGGGAGCTGATACAATGTCTGCGGGAGGTGGCGGCCCATTGGGCGACAATAACCAAGG 2826 ||||||| ||| || ||| | | |||||||| | ||| ||||| | ||| | || || Sbjct 39623 TTTGGGATCTGGTATCATGGCAGAAGGAGGTGGAGTACCAATGGGCAATAATCAACAGGG 39682 Query 2827 TGCCGATGGAGTGGGCAATGCCTCGGGAGATTGGCATTGCGATTCCACGTGGATGGGGGA 2886 ||| ||| |||| || ||| | | |||| ||| |||||| | ||| |||||||| | Sbjct 39683 TGCTGATAGAGTAGGTAATTCTTTGGGAAATTAGCATTGTGGTTCTCAATGGATGGGCCA 39742 Query 2887 CAGAGTCGTCACCAAGTCCACCCGAAC-CTGGGTGCTGCCCAGCTACAACAACCACCAGT 2945 ||||||| |||| | | | | |||||| ||| | || ||||||||||| | Sbjct 39743 CAGAGTCACCACC----CGAAAAGCTCTCTGGGTCTCGCCTACCTGCAACAACCACCTCT 39798 Query 2946 ACCGAGAGATCAAAAGCGGCTCCGTCGACGGAAGCAACGCCAACGCCTACTTTGGATACA 3005 || || |||||| | | | | || | ||| |||||| ||||||||| | || Sbjct 39799 ACAAGCAGTTCAAAATAG--TGCCACCACAG--GCAGTGCCAACAACTACTTTGGCTTCA 39854 Query 3006 GCACCCCCTGGGGGTACTTTGACTTTAACCGCTTCCACAGCCACTGGAGCCCCCGAGACT 3065 || ||||||||||| | |||||||| ||| | |||||| |||||| |||||| |||||| Sbjct 39855 GCTCCCCCTGGGGGAATTTTGACTTCAACAGATTCCACTGCCACTTCAGCCCCTGAGACT 39914 Query 3066 GGCAAAGACTCATCAACAACTACTGGGGCTTCAGACCCCGGTCCCTCAGAGTCAAAATCT 3125 |||||||||| ||||| ||| ||||||| | |||| ||| ||||| ||| Sbjct 39915 GGCAAAGACTTATCAATAACAACTGGGGACTGCGACCTAAAAACCTGCACTTCAAACTCT 39974 Query 3126 TCAACATTCAAGTCAAAGAGGTCACGGTGCAGGACT----CCACCACNNNNATCGCCAAC 3181 ||||||| |||||||| || ||||| | |||| | ||||| || || || Sbjct 39975 TCAACATCCAAGTCAAGGAAGTCAC-AAGGAGGAATGTTGAAACCAC---AATTGCTAAT 40030 Query 3182 AACCTCACCTCCACCGTCCAAGTGTTTACGGACGACGACTACCAGCTGCCCTACGTCGTC 3241 ||||| ||| || | ||||| ||| ||||| || | || || || || || || Sbjct 40031 AACCTTACCAGCATGATTCAAGTCTTTGCGGACTCAGAGTGTCAACTCCCATATGTGATC 40090 Query 3242 GGCAACGGGACCGAGGGATGCCTGCCGGCCTTCCCTCCGCAGGTCTTTACGCTGCCGCAG 3301 | | | ||| | ||||| | |||||||||| | || |||| | |||| ||| Sbjct 40091 AGGAGTGCTCAAGAGAGGTGCCTACTCCCCTTCCCTCCTGATGTGTTTATGTTGCCTCAG 40150 Query 3302 TACGGTTACGCGACGCTGAACCGCGACAACACAGAAAATCCCACCGAGAGGAGCAGCTTC 3361 || || || || || || || ||||| | ||||||||| ||| Sbjct 40151 TATGGATATTGTACTTTGGACAATGA----TGGGAAAAGTTTA--GAGAGGAGCGCATTC 40204 Query 3362 TTCTGCCTAGAGTACTTTCCCAGCAAGATGCTGAGAACGGGCAACAACTTTGAGTTTACC 3421 | || ||||| | ||||| | | | || |||||| ||| |||||||||| ||| || Sbjct 40205 TACTTTCTAGAACATTTTCCTAACCAAATATTGAGAATGGGTAACAACTTTGCATTTTCC 40264 Query 3422 TA 3423 || Sbjct 40265 TA 40266 >seq93414 Length=10396 Score = 187 bits (206), Expect = 7e-44 Identities = 241/330 (73%), Gaps = 2/330 (1%) Strand=Plus/Plus Query 1361 GGCAAGACCAACATCGCGGAGGCCATCGCCCACACTGTGCCCTTTTACGGCTGCGTGAAC 1420 ||| |||| ||||| || || |||||||| |||||||| || | | ||||| |||| Sbjct 1401 GGCCAGACAAACATTGCAGAAGCCATCGCACACACTGTACCTTCCCATGGCTGTATGAAT 1460 Query 1421 TGGACCAATGAAAACTTTCCCTTTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAG 1480 |||||||||| |||| ||||||| |||||||||| || ||||| |||| ||| ||| Sbjct 1461 TGGACCAATG-AAACCTTCCCTTCCATGACTGTGTAGATGAAATGATCATCCGGTAGGAA 1519 Query 1481 GAGGGAAAGATGACCAACAAGGTGGTTGAATCCGCCAAGGCCATCCTGGGGGGCTCAAAG 1540 || | | ||||| || | | ||| | || | ||| || | || | || Sbjct 1520 GAAGACACAATGACTGCTAAAATCATGGAAATGACTAAAGTCATTCTCAGTGGAGCTAAA 1579 Query 1541 GTGCGGGTCGATCAGAAATGTAAATCCTCTGTTCAAATTGATTCTACCCCTGTCATTGTA 1600 || || || ||||| ||||| || |||||||||||| | || ||||| || || ||| | Sbjct 1580 GTTCGTGTGGATCATAAATGCAAGTCCTCTGTTCAACTGGAGTCTACACCAGTGATTATC 1639 Query 1601 ACTTCCAATACAAACATGTGTGTGGTGGTGGATGGGAATTCCACGACCTTTGAACACCAG 1660 ||||| || | ||||||| |||| |||||||||| ||||||| |||||| || || Sbjct 1640 ACTTCTAACA-GGACATGTGCCGTGTGGAGGATGGGAATACCACGACATTTGAATACAAG 1698 Query 1661 CAGCCGCTGGAGGACCGCATGTTCAAATTT 1690 |||| | |||| ||| ||||||| |||||| Sbjct 1699 CAGCTGTTGGAAGACTGCATGTTTAAATTT 1728 >seq111540 Length=9601 Score = 123 bits (136), Expect = 7e-25 Identities = 170/237 (72%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 3013 CTGGGGGTACTTTGACTTTAACCGCTTCCACAGC--CACTGGAGCCCCCGAGACTGGCAA 3070 |||||| || |||| || ||| | || | ||| |||||||| || ||||||||||| Sbjct 9085 CTGGGGATATATTGATTTCAACAGATT--ATAGCATCACTGGAGTCCTAGAGACTGGCAA 9028 Query 3071 AGACTCATCAACAACTACTGGGGCTTCAGACCCCGGTCCCTCAGAGTCAAAATCTTCAAC 3130 ||||||||||||| || |||||| |||||||| |||||||| ||||| |||||||| Sbjct 9027 AGACTCATCAACAGCTGCTGGGGACTCAGACCCAAATCCCTCAGTGTCAAGGTCTTCAAC 8968 Query 3131 ATTCAAGTCAAAGAGGTCACGGTGCAGGACTCCACCACNNNNATCGCCAACAACCTCACC 3190 || || ||||||| || | || | | ||| | | || |||||||| || Sbjct 8967 ATCCATATCAAAGAAGTTATGGAATAAAATGGCACAATGACCACTGCAAACAACCTGACA 8908 Query 3191 TCCACCGTCCAAGTGTTTACGGACGACGACTACCAGCTGCCCTACGTCGTCGGCAAC 3247 ||||| ||||||||||| | || || || ||||| | || ||| | || ||| Sbjct 8907 TCCACTATCCAAGTGTTTGCAGAGGAGAGCTGTCAGCTTTCTTATGTCCTAGGGAAC 8851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14697620489805