Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_006260.1 Length=4721 Score E Sequences producing significant alignments: (Bits) Value seq23094 327 3e-86 seq93414 145 2e-31 seq67558 140 1e-29 seq71896 116 1e-22 >seq23094 Length=55390 Score = 327 bits (362), Expect = 3e-86 Identities = 408/558 (73%), Gaps = 11/558 (2%) Strand=Plus/Plus Query 2802 CAGCGCCCTCTAGTGTGGGATCTGGTACAGTGGCTGCAGGCGGTGGCGCACCAATGGCAG 2861 |||| ||| ||| | |||||||||||| |||| | ||| ||||| | |||||||| Sbjct 39610 CAGCCCCCACTAATTTGGGATCTGGTATCATGGCAGAAGGAGGTGGAGTACCAATGGGCA 39669 Query 2862 ACAATAACGAAGGTGCCGACGGAGTGGGTAATGCCTCAGGAAATTGGCATTGCGATTCCA 2921 | ||| | | ||||| || |||| |||||| | | ||||||| |||||| | ||| Sbjct 39670 ATAATCAACAGGGTGCTGATAGAGTAGGTAATTCTTTGGGAAATTAGCATTGTGGTTCTC 39729 Query 2922 CATGGCTGGGCGACAGAGTCATTACCACCAGCACCCGAACCTGGGCCCTGCCCACCTACA 2981 |||| ||||| ||||||||| ||||| | | ||||| | ||| |||| || Sbjct 39730 AATGGATGGGCCACAGAGTCA---CCACCCGAAAAGCTCTCTGGGTCTCGCCTACCTGCA 39786 Query 2982 ACAACCACCTCTACAAGCAAATCTCCA--GTGAAACTGCAGGTAGTACCAACGACAACAC 3039 ||||||||||||||||||| || | ||| || |||| ||| ||||| || Sbjct 39787 ACAACCACCTCTACAAGCAGTTCAAAATAGTGCCACCACAGGCAGTGCCAACAAC----- 39841 Query 3040 CTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACTT 3099 ||||| |||| |||| ||||||||||| |||||||||| |||||||||||||||||||| Sbjct 39842 -TACTTTGGCTTCAGCTCCCCCTGGGGGAATTTTGACTTCAACAGATTCCACTGCCACTT 39900 Query 3100 CTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAAGCT 3159 | || | |||||||| |||| ||||| |||||||||||| | || || || || || Sbjct 39901 CAGCCCCTGAGACTGGCAAAGACTTATCAATAACAACTGGGGACTGCGACCTAAAAACCT 39960 Query 3160 GCGGTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGACGAATGACGGCGTTACGAC 3219 || ||||| |||||||||||||| |||||||| ||||| | || | | | || || Sbjct 39961 GCACTTCAAACTCTTCAACATCCAAGTCAAGGAAGTCACAAGGAGGAATGTTGAAACCAC 40020 Query 3220 CATCGCTAATAACCTTACCAGCACGATTCAGGTATTCTCGGACTCGGAATACCAGCTGCC 3279 || ||||||||||||||||||| |||||| || || ||||||| || | || || || Sbjct 40021 AATTGCTAATAACCTTACCAGCATGATTCAAGTCTTTGCGGACTCAGAGTGTCAACTCCC 40080 Query 3280 GTACGTCCTCGGCTCTGCGCACCAGGGCTGCCTGCCTCCGTTCCCGGCGGACGTCTTCAT 3339 || || || | ||| || || | ||||| | || ||||| | || || || || Sbjct 40081 ATATGTGATCAGGAGTGCTCAAGAGAGGTGCCTACTCCCCTTCCCTCCTGATGTGTTTAT 40140 Query 3340 GATTCCTCAGTACGGCTA 3357 | | |||||||| || || Sbjct 40141 GTTGCCTCAGTATGGATA 40158 Score = 235 bits (260), Expect = 2e-58 Identities = 324/448 (72%), Gaps = 4/448 (1%) Strand=Plus/Plus Query 1285 GGCTGGGCCCAGAAAA-AGTTCGGGAAGCGCAACACCATCTGGCTGTTTGGGCCCGCCAC 1343 ||||||||| |||||| | || || || | |||||||||||| | | ||| ||||| Sbjct 38286 GGCTGGGCC-AGAAAAGAATTTGGCAAAAGAAACACCATCTGGGTCTATGGAAAGGCCAC 38344 Query 1344 CACCGGCAAGACCAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGT 1403 || || || || ||||||| ||||||| | || ||| | |||||||||||||| | || Sbjct 38345 TACTGGGAACACTAACATTGTGGAAGCCGTTGCACACACGGTGCCCTTCTACGGGTATGT 38404 Query 1404 CAACTGGACCAATGAGAACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTG 1463 || ||||| |||||||||||||| |||| ||||| || || || ||| | |||||||| Sbjct 38405 GAATTGGACTAATGAGAACTTTCCATTCAGTGATTGTGTGGATAAAATGCTCATCTGGTG 38464 Query 1464 GGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAG 1523 |||||| |||||||| || | | ||| || ||| | || || ||||| || || || || Sbjct 38465 GGAGGAAGGCAAGATTACCTCTATGGTGGTTGAGACAGCTAAAGCCATCCTTGGAGG-AG 38523 Query 1524 C-AAGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGA 1582 | || || | |||||||| | || ||||| || | || || || || || || | Sbjct 38524 CTAAAGTTCAGGTGGACCAGGAATGTAAGTCCTCTGTTCAAATTGATTGTACTCCAGTCA 38583 Query 1583 TCGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGC 1642 || ||||||||||||||||||||||| | || | || |||||| | | ||| |||| Sbjct 38584 TCATCACCTCCAACACCAACATGTGCTACATGGTGGATCGGAACACTATGATCTTTGAGC 38643 Query 1643 ACCAGCAGCCGTTGCAGGACCGGATGTTCAAATTTGAACTCACCCGCCGTCTGGAGCACG 1702 | ||||| ||| || |||| ||||| |||| ||| | || | | Sbjct 38644 ATAAGCAGTTGTTACAAGACCACATGTTTCAATTCATGCTCGTGGAGAGACTTCCTGATG 38703 Query 1703 ACTTTGGCAAGGTGACGAAGCAGGAAGT 1730 |||||||||||||||| ||| |||| || Sbjct 38704 ACTTTGGCAAGGTGACAAAGGAGGAGGT 38731 Score = 152 bits (168), Expect = 2e-33 Identities = 274/399 (69%), Gaps = 10/399 (3%) Strand=Plus/Plus Query 4031 CCTGGCATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATT 4090 ||||| |||||||||||||| | ||| | | || || |||||||| ||||| |||||| Sbjct 40856 CCTGGAATGGTCTGGCAGAAAAGAGACATCAATCTCCATGGTCCCATTTGGGCTAAGATT 40915 Query 4091 CCTCACACGGATGGCAACTTTCACCCGTCTCCTTTGATGGGCGGCTTTGGACTTAAACAT 4150 |||||||| ||||| |||| || || |||||| | ||||| |||||||| || ||||| Sbjct 40916 CCTCACACAGATGGTTACTTCCATCCCTCTCCTCTTATGGGTGGCTTTGGTCTCAAACAA 40975 Query 4151 CCGCCTCCTCAGATCCTGATCAAGAACACTCCCGTTCCCGCTAATCCTCCGGAGGTGTTT 4210 | |||||||||| |||| || ||| |||| || || ||||| || | | || Sbjct 40976 TCTCCTCCTCAGAATATGATTAAAAACTCTCCTGTCCCTGCTAACCCCACCACCATCTTC 41035 Query 4211 ACTCCTGCCAAGTTTGCTTCGTTCATCACACAGTACAGCACCGGACAAGTCAGCGTGGAA 4270 |||| || ||| || || ||||| || ||| | || ||||| | || ||| Sbjct 41036 ACTCTTGTCAAACAAAACTCTTTTATCACTCAATACTCTATTGGTCAAGTGACTGTAGAA 41095 Query 4271 ATCGAGTGGGAGCTGCAGAAGGAAAACAGCAAGCGCTGGAACCCGGAGATTCAGTACACC 4330 || || ||||| || || ||||||| |||| |||| || || || || | || Sbjct 41096 ATTGAATGGGAACTCCATAAGGAAAGTTCCAAGAAATGGACTCCTGAAATCCATTTTACT 41155 Query 4331 TCCAACTTTGAAAAGCA-----GACTGGTGTGGACTTTGCCGTTGACAGCCAGGGTGTTT 4385 ||||| ||| | || || |||| | | ||||| ||| | ||||| | Sbjct 41156 TCCAA-TTTCAGAAACACTATTGACTTATCT----TTTGCTCCCAACAATGAAGGTGTAT 41210 Query 4386 ACTCTGAGCCTCGCCCTATTGGCACTCGTTACCTCACCC 4424 ||| | | ||||| || ||||| || | ||||| |||| Sbjct 41211 ACTGTAAACCTCGTCCCATTGGTACCTGATACCTTACCC 41249 Score = 82.4 bits (90), Expect = 2e-12 Identities = 197/298 (66%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 2292 ACCTGAAACCTGGAGCCCCGAAACCCAAAGCCAACCAGCAAAAGCAGGACAACGGCCGGG 2351 |||| || |||| | || | || ||||| || || ||| | || || || | | Sbjct 39127 ACCTTGAAGCTGGCCCACCTCATCCTAAAGCTAATCAACAACATCAAGATGACTCTCATG 39186 Query 2352 GTCTGGTGCTTCCTGGCTACAAGTACCTCGGACCCTTCAACGGACTCGACAAGGGGGAGC 2411 | ||||| || | ||||| ||||| || ||||| || || ||| | |||||||||| Sbjct 39187 GACTGGTTCTGGCAGGCTATAAGTATCTTATTCCCTTTAATGGTCTCTATAAGGGGGAGC 39246 Query 2412 CCGTCAACGCGGCGGACGCAGCGGCCCTCGAGCACGACAAGGCCTACGACCAGCAGCTCA 2471 | || || || ||| ||| | ||||| || || || ||||| || || |||| Sbjct 39247 CAGTTAATTAAGCAGACAAAGCCACACTCGAACAAGAGAAAGCCTATGATCAATTCCTCA 39306 Query 2472 AAGCGGGTGACAATCCGTACCTGCGGTATAACCACGCCGACGCCGAGTTTCAGGAGCGTC 2531 ||| || || ||||| | ||| || |||||| | ||| ||||| ||||| | Sbjct 39307 AAGAAGGGGAAAATCCTTTCCTCACCTACAACCACACAGACCAAGAGTTCCAGGAAAAAC 39366 Query 2532 TGCAAGAAGATACGTCATTTGGGGGCAACCTCGGGCGAGCAGTCTTCCAGGCCAAGAA 2589 | ||| | || |||||||| || ||||| || ||||| || || | ||||| Sbjct 39367 TTTCAGAGGGCACTTCATTTGGTGGTAACCTTGGCAAGGCAGTGTTTCAAGGAAAGAA 39424 >seq93414 Length=10396 Score = 145 bits (160), Expect = 2e-31 Identities = 234/331 (71%), Gaps = 4/331 (1%) Strand=Plus/Plus Query 1348 GGCAAGACCAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAAC 1407 ||| |||| |||||||| ||||||||||| ||| | || || | | | ||||| | || Sbjct 1401 GGCCAGACAAACATTGCAGAAGCCATCGCACACACTGTACCTTCCCATGGCTGTATGAAT 1460 Query 1408 TGGACCAATGAGAACTTTCCCTTCAACGATTGCGTCGACAAGATGGTGATCTGGTGGGAG 1467 ||||||||||| ||| |||||||| | || || || || | ||| | ||| ||| ||| Sbjct 1461 TGGACCAATGA-AACCTTCCCTTCCATGACTGTGTAGATGAAATGATCATCCGGTAGGAA 1519 Query 1468 GAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGC-AA 1526 || | || ||||| || || || |||| | || | ||||||| | || ||| || Sbjct 1520 GAAGACACAATGACTGCTAAAATCATGGAAATGACTAAAGTCATTCTCAGTGG-AGCTAA 1578 Query 1527 GGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGT 1586 || || ||||| || || |||||||| || | || | || | || || ||||| | Sbjct 1579 AGTTCGTGTGGATCATAAATGCAAGTCCTCTGTTCAACTGGAGTCTACACCAGTGATTAT 1638 Query 1587 CACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCA 1646 ||| || |||| |||||||| ||| || ||||| | ||| || || || || | Sbjct 1639 CACTTCTAACA-GGACATGTGCCGTGTGGAGGATGGGAATACCACGACATTTGAATACAA 1697 Query 1647 GCAGCCGTTGCAGGACCGGATGTTCAAATTT 1677 ||||| |||| | ||| | ||||| |||||| Sbjct 1698 GCAGCTGTTGGAAGACTGCATGTTTAAATTT 1728 >seq67558 Length=25472 Score = 140 bits (154), Expect = 1e-29 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 4031 CCTGGCATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATT 4090 ||||| ||||||||| || || | ||| | || || || |||| || | |||||||||| Sbjct 10648 CCTGGAATGGTCTGGTAGGACAGAGACATCTATCTACAAGGTCTGATGTAGGCCAAGATT 10589 Query 4091 CCTCACACGGATGGCAACTTTCACCCGTCTCCTTTGATGGGCGGCTTTGGACTTAAACAT 4150 ||||| | ||||| |||| ||| || ||| || |||| || |||||||| ||| || Sbjct 10588 CCTCATGCTGATGGACACTTCCACAATTCACCTCTGCTGGGTGGTTTTGGACTGAAAAAT 10529 Query 4151 CCGCCTCCTCAGATCCTGATCAAGAACACTCCCGTTCCCGCTAATCCTCCGGAGGTGTTT 4210 || |||||||||| | |||||||||||||||| | || ||||| |||| | || || Sbjct 10528 CCTCCTCCTCAGAACATGATCAAGAACACTCCTATGCCTGCTAACTCTCCAGTGGCTTTC 10469 Query 4211 ACTCCTGCCAAGTTTGCTTCGTTCATCACACAGTACAGCACCGGACAAGT 4260 |||| | ||| || |||||||| |||||| || || ||||| Sbjct 10468 ACTCTGGTCAAACAGAACTCTTTCATCACCCAGTACTCAACTGGTCAAGT 10419 >seq71896 Length=30598 Score = 116 bits (128), Expect = 1e-22 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 4024 AGCCTTACCTGGCATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGC 4083 || ||||||| | ||||||||| | || | || || |||||||| || |||||||| Sbjct 11012 AGTCTTACCTTGAATGGTCTGGGATGACAGAGATGTCTACCTGCAAAAACCTATCTGGGC 11071 Query 4084 CAAGATTCCTCACACGGATGGCAACTTTCACCCGTCTCCTTTGATGGGCGGCTTTGGACT 4143 ||||| ||||||| ||| | |||| ||||| || ||| | ||||| || ||| ||| Sbjct 11072 TAAGATCCCTCACATTGATAGACACTTCCACCCTTCGCCTCTCATGGGTGGATTTTTACT 11131 Query 4144 TAAACATCCGCCTCCTCAGATCCTGATCAAGAACACTCCCGTTCCCGCTAATCCTCCGGA 4203 ||| | | |||| ||||||| ||||||||||||| | | || ||||| |||| || Sbjct 11132 GAAAAAGCTTCCTCTTCAGATCATGATCAAGAACACCCAGATGCCTGCTAACCCTCTGGT 11191 Query 4204 GG 4205 || Sbjct 11192 GG 11193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14949652618890