Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06]
277,711 sequences; 3,075,184,024 total letters
Query= NC_006261.1
Length=4393
Score E
Sequences producing significant alignments: (Bits) Value
seq23094 284 3e-73
seq67558 136 1e-28
seq93414 134 4e-28
seq71896 111 4e-21
seq111540 104 6e-19
>seq23094
Length=55390
Score = 284 bits (314), Expect = 3e-73
Identities = 522/762 (69%), Gaps = 20/762 (3%)
Strand=Plus/Plus
Query 2701 CAGCGCCCTCTGGTGTGGGACCTAATACAATGGCTGCAGGCGGTGGCGCACCAATGGCAG 2760
|||| ||| || | ||||| || || ||||| | ||| ||||| | ||||||||
Sbjct 39610 CAGCCCCCACTAATTTGGGATCTGGTATCATGGCAGAAGGAGGTGGAGTACCAATGGGCA 39669
Query 2761 ACAATAACGAAGGCGCCGACGGAGTGGGTAGTTCCTCGGGAAATTGGCATTGCGATTCCA 2820
| ||| | | || || || |||| |||| ||| | |||||||| |||||| | |||
Sbjct 39670 ATAATCAACAGGGTGCTGATAGAGTAGGTAATTCTTTGGGAAATTAGCATTGTGGTTCTC 39729
Query 2821 CATGGCTGGGCGACAGAGTCATCACC--ACCAGCACCCGAACCTGGGCCCTGCCCACCTA 2878
|||| ||||| ||||||||| |||| | ||| | | |||| | ||| ||||
Sbjct 39730 AATGGATGGGCCACAGAGTCACCACCCGAAAAGCTCTC-----TGGGTCTCGCCTACCTG 39784
Query 2879 CAACAACCACCTCTACAAGCAAATCTCCAACGGGACATCGGGAGGAGCCACCAACGACAA 2938
||||||||||||||||||||| || | | | || | ||| || | |||
Sbjct 39785 CAACAACCACCTCTACAAGCAGTTCAAAATAGTGCCACCAC-AGG------CAGTGCCAA 39837
Query 2939 CACCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCA 2998
|| |||||| |||| |||| ||||||||||| |||||||||| |||||||||||||||||
Sbjct 39838 CAACTACTTTGGCTTCAGCTCCCCCTGGGGGAATTTTGACTTCAACAGATTCCACTGCCA 39897
Query 2999 CTTTTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAG 3058
||| || | |||||||| |||| ||||| |||||||||||| | || || || |
Sbjct 39898 CTTCAGCCCCTGAGACTGGCAAAGACTTATCAATAACAACTGGGGACTGCGACCTAAAAA 39957
Query 3059 ACTCAGCTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCAC---GCAGAATGAAGGCAC 3115
|| |||||| |||||||||||||| |||||||| ||||| | ||||| | ||
Sbjct 39958 CCTGCACTTCAAACTCTTCAACATCCAAGTCAAGGAAGTCACAAGGAGGAATGTTGAAAC 40017
Query 3116 CAAGACCATCGCCAATAACCTCACCAGCACCATCCAGGTGTTTACGGACTCGGAGTACCA 3175
| || || || |||||||| ||||||| || || || ||| ||||||| |||| ||
Sbjct 40018 C---ACAATTGCTAATAACCTTACCAGCATGATTCAAGTCTTTGCGGACTCAGAGTGTCA 40074
Query 3176 GCTGCCGTACGTTCTCGGCTCTGCCCACCAGGGCTGCCTGCCTCCGTTCCCGGCGGACGT 3235
|| || || || || | ||| || || | ||||| | || ||||| | || ||
Sbjct 40075 ACTCCCATATGTGATCAGGAGTGCTCAAGAGAGGTGCCTACTCCCCTTCCCTCCTGATGT 40134
Query 3236 GTTCATGATTCCCCAGTACGGCTACCTAACACTCAACAACGGTAGTCAGGCCGTGGGACG 3295
||| ||| | || ||||| || || || | |||| | | | | | | |
Sbjct 40135 GTTTATGTTGCCTCAGTATGGATATTGTACTTTGGACAATGATGGGAAAAGTTTAGAGAG 40194
Query 3296 CTCCTCCTTCTACTGCCTGGAATACTTTCCTTCGCAGATGCTGAGAACCGGCAACAACTT 3355
| | ||||||| || ||| | |||||| || || |||||| || ||||||||
Sbjct 40195 GAGCGCATTCTACTTTCTAGAACATTTTCCTAACCAAATATTGAGAATGGGTAACAACTT 40254
Query 3356 CCAGTTTACTTACACCTTCGAGGACGTGCCTTTCCACAGCAGCTACGCCCACAGCCAGAG 3415
||| | || | || || || || || || |||| | || | |||||
Sbjct 40255 TGCATTTTCCTATGCTTTTGAATCTGTCCCCTTTCATAGCATGTGGATACATAATCAGAG 40314
Query 3416 CTTGGACCGGCTGATGAATCCTCTGATTGACCAGTACCTGTA 3457
|||||| | |||||||||| ||||||| || || |||||
Sbjct 40315 CTTGGATAGATTGATGAATCCATTGATTGATCAATATCTGTA 40356
Score = 248 bits (274), Expect = 2e-62
Identities = 327/448 (73%), Gaps = 4/448 (1%)
Strand=Plus/Plus
Query 1184 GGCTGGGCTCAGAAAA-AGTTCGGGAAACGCAACACCATCTGGCTGTTTGGACCCGCCAC 1242
|||||||| ||||||| | || || ||| | |||||||||||| | | |||| |||||
Sbjct 38286 GGCTGGGC-CAGAAAAGAATTTGGCAAAAGAAACACCATCTGGGTCTATGGAAAGGCCAC 38344
Query 1243 CACCGGCAAGACCAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGT 1302
|| || || || ||||||| ||||||| | || ||| | |||||||||||||| | ||
Sbjct 38345 TACTGGGAACACTAACATTGTGGAAGCCGTTGCACACACGGTGCCCTTCTACGGGTATGT 38404
Query 1303 CAACTGGACCAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTG 1362
|| ||||| |||||||||||||| |||| |||||| || || || ||| | ||||||||
Sbjct 38405 GAATTGGACTAATGAGAACTTTCCATTCAGTGATTGTGTGGATAAAATGCTCATCTGGTG 38464
Query 1363 GGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAG 1422
|||||| |||||||| || | | ||| || ||| | || || ||||| || || || ||
Sbjct 38465 GGAGGAAGGCAAGATTACCTCTATGGTGGTTGAGACAGCTAAAGCCATCCTTGGAGG-AG 38523
Query 1423 C-AAGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGA 1481
| || || | |||||||| | || ||||| || | || || || || || || |
Sbjct 38524 CTAAAGTTCAGGTGGACCAGGAATGTAAGTCCTCTGTTCAAATTGATTGTACTCCAGTCA 38583
Query 1482 TCGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGC 1541
|| ||||||||||||||||||||||| | || | || |||||| | | ||| ||||
Sbjct 38584 TCATCACCTCCAACACCAACATGTGCTACATGGTGGATCGGAACACTATGATCTTTGAGC 38643
Query 1542 ACCAGCAGCCTCTCCAGGACCGGATGTTTAAGTTCGAACTCACCCGCCGTCTGGAGCACG 1601
| ||||| | || |||| |||||| | ||| ||| | || | |
Sbjct 38644 ATAAGCAGTTGTTACAAGACCACATGTTTCAATTCATGCTCGTGGAGAGACTTCCTGATG 38703
Query 1602 ACTTTGGCAAGGTGACAAAGCAGGAAGT 1629
|||||||||||||||||||| |||| ||
Sbjct 38704 ACTTTGGCAAGGTGACAAAGGAGGAGGT 38731
Score = 197 bits (218), Expect = 4e-47
Identities = 286/398 (72%), Gaps = 8/398 (2%)
Strand=Plus/Plus
Query 3933 CCCGGTATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATT 3992
|| || |||||||||||||| | ||| | | || || |||||||| ||||| ||||||
Sbjct 40856 CCTGGAATGGTCTGGCAGAAAAGAGACATCAATCTCCATGGTCCCATTTGGGCTAAGATT 40915
Query 3993 CCTCACACGGACGGCAACTTCCACCCGTCTCCGCTGATGGGCGGCTTTGGCCTGAAACAT 4052
|||||||| || || ||||||| || ||||| || ||||| |||||||| || |||||
Sbjct 40916 CCTCACACAGATGGTTACTTCCATCCCTCTCCTCTTATGGGTGGCTTTGGTCTCAAACAA 40975
Query 4053 CCTCCGCCTCAGATCCTGATCAAGAACACGCCTGTACCTGCGGATCCTCCGACCACCTTC 4112
|||| ||||||| |||| || ||| | ||||| ||||| | || | |||| ||||
Sbjct 40976 TCTCCTCCTCAGAATATGATTAAAAACTCTCCTGTCCCTGCTAACCCCACCACCATCTTC 41035
Query 4113 A-ACCAGTCAAAGCTGAACTCTTTCATCACGCAATACAGCACCGGACAGGTCAGCGTGGA 4171
| | |||||| | |||||||| ||||| |||||| | || || || | || ||
Sbjct 41036 ACTCTTGTCAAA-CAAAACTCTTTTATCACTCAATACTCTATTGGTCAAGTGACTGTAGA 41094
Query 4172 AATTGAATGGGAGCTGCAGAAGGAAAACAGCAAGCGCTGGAACCCCGAGATCCAGTACAC 4231
|||||||||||| || || ||||||| |||| |||| || || ||||| | ||
Sbjct 41095 AATTGAATGGGAACTCCATAAGGAAAGTTCCAAGAAATGGACTCCTGAAATCCATTTTAC 41154
Query 4232 CTCCAACTACTACAAATCTACAAGTG---TGGACTTTGCTGTTAATACAGAAGGCGTGTA 4288
||||| | | | ||| || | || | |||||| || | ||||| || ||
Sbjct 41155 TTCCAATTTC-AGAAA--CACTATTGACTTATCTTTTGCTCCCAACAATGAAGGTGTATA 41211
Query 4289 CTCTGAACCCCGCCCCATTGGCACCCGTTACCTCACCC 4326
|| | |||| || |||||||| ||| | ||||| ||||
Sbjct 41212 CTGTAAACCTCGTCCCATTGGTACCTGATACCTTACCC 41249
>seq67558
Length=25472
Score = 136 bits (150), Expect = 1e-28
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 3933 CCCGGTATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATT 3992
|| || ||||||||| || || | ||| | || || || |||| || | ||||||||||
Sbjct 10648 CCTGGAATGGTCTGGTAGGACAGAGACATCTATCTACAAGGTCTGATGTAGGCCAAGATT 10589
Query 3993 CCTCACACGGACGGCAACTTCCACCCGTCTCCGCTGATGGGCGGCTTTGGCCTGAAACAT 4052
||||| | || || |||||||| || || ||| |||| || ||||| |||||| ||
Sbjct 10588 CCTCATGCTGATGGACACTTCCACAATTCACCTCTGCTGGGTGGTTTTGGACTGAAAAAT 10529
Query 4053 CCTCCGCCTCAGATCCTGATCAAGAACACGCCTGTACCTGCGGATCCTCCGACCACCTTC 4112
||||| ||||||| | ||||||||||||| ||| | ||||| | |||| | |||
Sbjct 10528 CCTCCTCCTCAGAACATGATCAAGAACACTCCTATGCCTGCTAACTCTCCAGTGGCTTTC 10469
Query 4113 A-ACCAGTCAAAGCTGAACTCTTTCATCACGCAATAC 4148
| | |||||| | ||||||||||||||| || |||
Sbjct 10468 ACTCTGGTCAAA-CAGAACTCTTTCATCACCCAGTAC 10433
>seq93414
Length=10396
Score = 134 bits (148), Expect = 4e-28
Identities = 231/330 (70%), Gaps = 4/330 (1%)
Strand=Plus/Plus
Query 1247 GGCAAGACCAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAAC 1306
||| |||| |||||||| ||||||||||| ||| | || || | | | ||||| | ||
Sbjct 1401 GGCCAGACAAACATTGCAGAAGCCATCGCACACACTGTACCTTCCCATGGCTGTATGAAT 1460
Query 1307 TGGACCAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAG 1366
||||||||||| ||| |||||||| |||| || || || | ||| | ||| ||| |||
Sbjct 1461 TGGACCAATGA-AACCTTCCCTTCCATGACTGTGTAGATGAAATGATCATCCGGTAGGAA 1519
Query 1367 GAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGC-AA 1425
|| | || ||||| || || || |||| | || | ||||||| | || ||| ||
Sbjct 1520 GAAGACACAATGACTGCTAAAATCATGGAAATGACTAAAGTCATTCTCAGTGG-AGCTAA 1578
Query 1426 GGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGT 1485
|| || ||||| || || |||||||| || | || | || | || || ||||| |
Sbjct 1579 AGTTCGTGTGGATCATAAATGCAAGTCCTCTGTTCAACTGGAGTCTACACCAGTGATTAT 1638
Query 1486 CACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCA 1545
||| || |||| |||||||| ||| || ||||| | ||| || || || || |
Sbjct 1639 CACTTCTAACA-GGACATGTGCCGTGTGGAGGATGGGAATACCACGACATTTGAATACAA 1697
Query 1546 GCAGCCTCTCCAGGACCGGATGTTTAAGTT 1575
||||| | | ||| | |||||||| ||
Sbjct 1698 GCAGCTGTTGGAAGACTGCATGTTTAAATT 1727
>seq71896
Length=30598
Score = 111 bits (122), Expect = 4e-21
Identities = 187/268 (70%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 3929 CTTACCCGGTATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAA 3988
|||||| | ||||||||| | || | || || |||||||| || |||||||| ||
Sbjct 11015 CTTACCTTGAATGGTCTGGGATGACAGAGATGTCTACCTGCAAAAACCTATCTGGGCTAA 11074
Query 3989 GATTCCTCACACGGACGGCAACTTCCACCCGTCTCCGCTGATGGGCGGCTTTGGCCTGAA 4048
||| ||||||| || | |||||||||| || || || ||||| || ||| |||||
Sbjct 11075 GATCCCTCACATTGATAGACACTTCCACCCTTCGCCTCTCATGGGTGGATTTTTACTGAA 11134
Query 4049 ACATCCTCCGCCTCAGATCCTGATCAAGAACACGCCTGTACCTGCGGATCCTCCGACCAC 4108
| | | ||| | ||||||| ||||||||||||| | | ||||| | |||| | |
Sbjct 11135 AAAGCTTCCTCTTCAGATCATGATCAAGAACACCCAGATGCCTGCTAACCCTCTGGTGGC 11194
Query 4109 CTTCA-ACCAGTCAAAGCTGAACTCTTTCATCACGCAATACAGCACCGGACAGGTCAGCG 4167
|||| || ||| | | |||||||||||||| | ||| || | || | |
Sbjct 11195 TTTCACCCCCATCAGA-CAAAACTCTTTCATCACCAAGTACTCTACTAGTCAATTGGTGG 11253
Query 4168 TGGAAATTGAATGGGAGCTGCAGAAGGA 4195
| | |||||||| || || ||||||||
Sbjct 11254 TAAAGATTGAATGAGAACTCCAGAAGGA 11281
>seq111540
Length=9601
Score = 104 bits (114), Expect = 6e-19
Identities = 157/220 (71%), Gaps = 5/220 (2%)
Strand=Plus/Minus
Query 2942 CTACTTCGGCTACAGCACCCC-CTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACT 3000
|||| || | || ||||| | |||||| ||| |||| || |||||||| | ||||
Sbjct 9107 CTACCTCAGTTATAGCACAACTCTGGGGATATATTGATTTCAACAGATTATAGCATCACT 9048
Query 3001 TTTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAGAC 3060
|| | |||||||| |||||||||||| | ||||||| || | ||||| |
Sbjct 9047 GGAGTCCTAGAGACTGGCAAAGACTCATCAACAGCTGCTGGGGACTCAGACCCAAATCCC 8988
Query 3061 TCAGCTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGCAGAATGAA--GGCACCAA 3118
|||| ||||| ||||||||||||| |||| || || | | |||| || ||||| |
Sbjct 8987 TCAGTGTCAAGGTCTTCAACATCCATATCAAAGAAGTTATG--GAATAAAATGGCACAAT 8930
Query 3119 GACCATCGCCAATAACCTCACCAGCACCATCCAGGTGTTT 3158
||||| || || ||||| || ||| ||||| ||||||
Sbjct 8929 GACCACTGCAAACAACCTGACATCCACTATCCAAGTGTTT 8890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 13903240741170
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