Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_006261.1 Length=4393 Score E Sequences producing significant alignments: (Bits) Value seq23094 284 3e-73 seq67558 136 1e-28 seq93414 134 4e-28 seq71896 111 4e-21 seq111540 104 6e-19 >seq23094 Length=55390 Score = 284 bits (314), Expect = 3e-73 Identities = 522/762 (69%), Gaps = 20/762 (3%) Strand=Plus/Plus Query 2701 CAGCGCCCTCTGGTGTGGGACCTAATACAATGGCTGCAGGCGGTGGCGCACCAATGGCAG 2760 |||| ||| || | ||||| || || ||||| | ||| ||||| | |||||||| Sbjct 39610 CAGCCCCCACTAATTTGGGATCTGGTATCATGGCAGAAGGAGGTGGAGTACCAATGGGCA 39669 Query 2761 ACAATAACGAAGGCGCCGACGGAGTGGGTAGTTCCTCGGGAAATTGGCATTGCGATTCCA 2820 | ||| | | || || || |||| |||| ||| | |||||||| |||||| | ||| Sbjct 39670 ATAATCAACAGGGTGCTGATAGAGTAGGTAATTCTTTGGGAAATTAGCATTGTGGTTCTC 39729 Query 2821 CATGGCTGGGCGACAGAGTCATCACC--ACCAGCACCCGAACCTGGGCCCTGCCCACCTA 2878 |||| ||||| ||||||||| |||| | ||| | | |||| | ||| |||| Sbjct 39730 AATGGATGGGCCACAGAGTCACCACCCGAAAAGCTCTC-----TGGGTCTCGCCTACCTG 39784 Query 2879 CAACAACCACCTCTACAAGCAAATCTCCAACGGGACATCGGGAGGAGCCACCAACGACAA 2938 ||||||||||||||||||||| || | | | || | ||| || | ||| Sbjct 39785 CAACAACCACCTCTACAAGCAGTTCAAAATAGTGCCACCAC-AGG------CAGTGCCAA 39837 Query 2939 CACCTACTTCGGCTACAGCACCCCCTGGGGGTATTTTGACTTTAACAGATTCCACTGCCA 2998 || |||||| |||| |||| ||||||||||| |||||||||| ||||||||||||||||| Sbjct 39838 CAACTACTTTGGCTTCAGCTCCCCCTGGGGGAATTTTGACTTCAACAGATTCCACTGCCA 39897 Query 2999 CTTTTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAG 3058 ||| || | |||||||| |||| ||||| |||||||||||| | || || || | Sbjct 39898 CTTCAGCCCCTGAGACTGGCAAAGACTTATCAATAACAACTGGGGACTGCGACCTAAAAA 39957 Query 3059 ACTCAGCTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCAC---GCAGAATGAAGGCAC 3115 || |||||| |||||||||||||| |||||||| ||||| | ||||| | || Sbjct 39958 CCTGCACTTCAAACTCTTCAACATCCAAGTCAAGGAAGTCACAAGGAGGAATGTTGAAAC 40017 Query 3116 CAAGACCATCGCCAATAACCTCACCAGCACCATCCAGGTGTTTACGGACTCGGAGTACCA 3175 | || || || |||||||| ||||||| || || || ||| ||||||| |||| || Sbjct 40018 C---ACAATTGCTAATAACCTTACCAGCATGATTCAAGTCTTTGCGGACTCAGAGTGTCA 40074 Query 3176 GCTGCCGTACGTTCTCGGCTCTGCCCACCAGGGCTGCCTGCCTCCGTTCCCGGCGGACGT 3235 || || || || || | ||| || || | ||||| | || ||||| | || || Sbjct 40075 ACTCCCATATGTGATCAGGAGTGCTCAAGAGAGGTGCCTACTCCCCTTCCCTCCTGATGT 40134 Query 3236 GTTCATGATTCCCCAGTACGGCTACCTAACACTCAACAACGGTAGTCAGGCCGTGGGACG 3295 ||| ||| | || ||||| || || || | |||| | | | | | | | Sbjct 40135 GTTTATGTTGCCTCAGTATGGATATTGTACTTTGGACAATGATGGGAAAAGTTTAGAGAG 40194 Query 3296 CTCCTCCTTCTACTGCCTGGAATACTTTCCTTCGCAGATGCTGAGAACCGGCAACAACTT 3355 | | ||||||| || ||| | |||||| || || |||||| || |||||||| Sbjct 40195 GAGCGCATTCTACTTTCTAGAACATTTTCCTAACCAAATATTGAGAATGGGTAACAACTT 40254 Query 3356 CCAGTTTACTTACACCTTCGAGGACGTGCCTTTCCACAGCAGCTACGCCCACAGCCAGAG 3415 ||| | || | || || || || || || |||| | || | ||||| Sbjct 40255 TGCATTTTCCTATGCTTTTGAATCTGTCCCCTTTCATAGCATGTGGATACATAATCAGAG 40314 Query 3416 CTTGGACCGGCTGATGAATCCTCTGATTGACCAGTACCTGTA 3457 |||||| | |||||||||| ||||||| || || ||||| Sbjct 40315 CTTGGATAGATTGATGAATCCATTGATTGATCAATATCTGTA 40356 Score = 248 bits (274), Expect = 2e-62 Identities = 327/448 (73%), Gaps = 4/448 (1%) Strand=Plus/Plus Query 1184 GGCTGGGCTCAGAAAA-AGTTCGGGAAACGCAACACCATCTGGCTGTTTGGACCCGCCAC 1242 |||||||| ||||||| | || || ||| | |||||||||||| | | |||| ||||| Sbjct 38286 GGCTGGGC-CAGAAAAGAATTTGGCAAAAGAAACACCATCTGGGTCTATGGAAAGGCCAC 38344 Query 1243 CACCGGCAAGACCAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGT 1302 || || || || ||||||| ||||||| | || ||| | |||||||||||||| | || Sbjct 38345 TACTGGGAACACTAACATTGTGGAAGCCGTTGCACACACGGTGCCCTTCTACGGGTATGT 38404 Query 1303 CAACTGGACCAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTG 1362 || ||||| |||||||||||||| |||| |||||| || || || ||| | |||||||| Sbjct 38405 GAATTGGACTAATGAGAACTTTCCATTCAGTGATTGTGTGGATAAAATGCTCATCTGGTG 38464 Query 1363 GGAGGAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAG 1422 |||||| |||||||| || | | ||| || ||| | || || ||||| || || || || Sbjct 38465 GGAGGAAGGCAAGATTACCTCTATGGTGGTTGAGACAGCTAAAGCCATCCTTGGAGG-AG 38523 Query 1423 C-AAGGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGA 1481 | || || | |||||||| | || ||||| || | || || || || || || | Sbjct 38524 CTAAAGTTCAGGTGGACCAGGAATGTAAGTCCTCTGTTCAAATTGATTGTACTCCAGTCA 38583 Query 1482 TCGTCACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGC 1541 || ||||||||||||||||||||||| | || | || |||||| | | ||| |||| Sbjct 38584 TCATCACCTCCAACACCAACATGTGCTACATGGTGGATCGGAACACTATGATCTTTGAGC 38643 Query 1542 ACCAGCAGCCTCTCCAGGACCGGATGTTTAAGTTCGAACTCACCCGCCGTCTGGAGCACG 1601 | ||||| | || |||| |||||| | ||| ||| | || | | Sbjct 38644 ATAAGCAGTTGTTACAAGACCACATGTTTCAATTCATGCTCGTGGAGAGACTTCCTGATG 38703 Query 1602 ACTTTGGCAAGGTGACAAAGCAGGAAGT 1629 |||||||||||||||||||| |||| || Sbjct 38704 ACTTTGGCAAGGTGACAAAGGAGGAGGT 38731 Score = 197 bits (218), Expect = 4e-47 Identities = 286/398 (72%), Gaps = 8/398 (2%) Strand=Plus/Plus Query 3933 CCCGGTATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATT 3992 || || |||||||||||||| | ||| | | || || |||||||| ||||| |||||| Sbjct 40856 CCTGGAATGGTCTGGCAGAAAAGAGACATCAATCTCCATGGTCCCATTTGGGCTAAGATT 40915 Query 3993 CCTCACACGGACGGCAACTTCCACCCGTCTCCGCTGATGGGCGGCTTTGGCCTGAAACAT 4052 |||||||| || || ||||||| || ||||| || ||||| |||||||| || ||||| Sbjct 40916 CCTCACACAGATGGTTACTTCCATCCCTCTCCTCTTATGGGTGGCTTTGGTCTCAAACAA 40975 Query 4053 CCTCCGCCTCAGATCCTGATCAAGAACACGCCTGTACCTGCGGATCCTCCGACCACCTTC 4112 |||| ||||||| |||| || ||| | ||||| ||||| | || | |||| |||| Sbjct 40976 TCTCCTCCTCAGAATATGATTAAAAACTCTCCTGTCCCTGCTAACCCCACCACCATCTTC 41035 Query 4113 A-ACCAGTCAAAGCTGAACTCTTTCATCACGCAATACAGCACCGGACAGGTCAGCGTGGA 4171 | | |||||| | |||||||| ||||| |||||| | || || || | || || Sbjct 41036 ACTCTTGTCAAA-CAAAACTCTTTTATCACTCAATACTCTATTGGTCAAGTGACTGTAGA 41094 Query 4172 AATTGAATGGGAGCTGCAGAAGGAAAACAGCAAGCGCTGGAACCCCGAGATCCAGTACAC 4231 |||||||||||| || || ||||||| |||| |||| || || ||||| | || Sbjct 41095 AATTGAATGGGAACTCCATAAGGAAAGTTCCAAGAAATGGACTCCTGAAATCCATTTTAC 41154 Query 4232 CTCCAACTACTACAAATCTACAAGTG---TGGACTTTGCTGTTAATACAGAAGGCGTGTA 4288 ||||| | | | ||| || | || | |||||| || | ||||| || || Sbjct 41155 TTCCAATTTC-AGAAA--CACTATTGACTTATCTTTTGCTCCCAACAATGAAGGTGTATA 41211 Query 4289 CTCTGAACCCCGCCCCATTGGCACCCGTTACCTCACCC 4326 || | |||| || |||||||| ||| | ||||| |||| Sbjct 41212 CTGTAAACCTCGTCCCATTGGTACCTGATACCTTACCC 41249 >seq67558 Length=25472 Score = 136 bits (150), Expect = 1e-28 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 3933 CCCGGTATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAAGATT 3992 || || ||||||||| || || | ||| | || || || |||| || | |||||||||| Sbjct 10648 CCTGGAATGGTCTGGTAGGACAGAGACATCTATCTACAAGGTCTGATGTAGGCCAAGATT 10589 Query 3993 CCTCACACGGACGGCAACTTCCACCCGTCTCCGCTGATGGGCGGCTTTGGCCTGAAACAT 4052 ||||| | || || |||||||| || || ||| |||| || ||||| |||||| || Sbjct 10588 CCTCATGCTGATGGACACTTCCACAATTCACCTCTGCTGGGTGGTTTTGGACTGAAAAAT 10529 Query 4053 CCTCCGCCTCAGATCCTGATCAAGAACACGCCTGTACCTGCGGATCCTCCGACCACCTTC 4112 ||||| ||||||| | ||||||||||||| ||| | ||||| | |||| | ||| Sbjct 10528 CCTCCTCCTCAGAACATGATCAAGAACACTCCTATGCCTGCTAACTCTCCAGTGGCTTTC 10469 Query 4113 A-ACCAGTCAAAGCTGAACTCTTTCATCACGCAATAC 4148 | | |||||| | ||||||||||||||| || ||| Sbjct 10468 ACTCTGGTCAAA-CAGAACTCTTTCATCACCCAGTAC 10433 >seq93414 Length=10396 Score = 134 bits (148), Expect = 4e-28 Identities = 231/330 (70%), Gaps = 4/330 (1%) Strand=Plus/Plus Query 1247 GGCAAGACCAACATTGCGGAAGCCATCGCCCACGCCGTGCCCTTCTACGGCTGCGTCAAC 1306 ||| |||| |||||||| ||||||||||| ||| | || || | | | ||||| | || Sbjct 1401 GGCCAGACAAACATTGCAGAAGCCATCGCACACACTGTACCTTCCCATGGCTGTATGAAT 1460 Query 1307 TGGACCAATGAGAACTTTCCCTTCAATGATTGCGTCGACAAGATGGTGATCTGGTGGGAG 1366 ||||||||||| ||| |||||||| |||| || || || | ||| | ||| ||| ||| Sbjct 1461 TGGACCAATGA-AACCTTCCCTTCCATGACTGTGTAGATGAAATGATCATCCGGTAGGAA 1519 Query 1367 GAGGGCAAGATGACGGCCAAGGTCGTGGAGTCCGCCAAGGCCATTCTCGGCGGCAGC-AA 1425 || | || ||||| || || || |||| | || | ||||||| | || ||| || Sbjct 1520 GAAGACACAATGACTGCTAAAATCATGGAAATGACTAAAGTCATTCTCAGTGG-AGCTAA 1578 Query 1426 GGTGCGCGTGGACCAAAAGTGCAAGTCGTCCGCCCAGATCGACCCCACCCCCGTGATCGT 1485 || || ||||| || || |||||||| || | || | || | || || ||||| | Sbjct 1579 AGTTCGTGTGGATCATAAATGCAAGTCCTCTGTTCAACTGGAGTCTACACCAGTGATTAT 1638 Query 1486 CACCTCCAACACCAACATGTGCGCCGTGATTGACGGGAACAGCACCACCTTCGAGCACCA 1545 ||| || |||| |||||||| ||| || ||||| | ||| || || || || | Sbjct 1639 CACTTCTAACA-GGACATGTGCCGTGTGGAGGATGGGAATACCACGACATTTGAATACAA 1697 Query 1546 GCAGCCTCTCCAGGACCGGATGTTTAAGTT 1575 ||||| | | ||| | |||||||| || Sbjct 1698 GCAGCTGTTGGAAGACTGCATGTTTAAATT 1727 >seq71896 Length=30598 Score = 111 bits (122), Expect = 4e-21 Identities = 187/268 (70%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 3929 CTTACCCGGTATGGTCTGGCAGAACCGGGACGTGTACCTGCAGGGTCCCATCTGGGCCAA 3988 |||||| | ||||||||| | || | || || |||||||| || |||||||| || Sbjct 11015 CTTACCTTGAATGGTCTGGGATGACAGAGATGTCTACCTGCAAAAACCTATCTGGGCTAA 11074 Query 3989 GATTCCTCACACGGACGGCAACTTCCACCCGTCTCCGCTGATGGGCGGCTTTGGCCTGAA 4048 ||| ||||||| || | |||||||||| || || || ||||| || ||| ||||| Sbjct 11075 GATCCCTCACATTGATAGACACTTCCACCCTTCGCCTCTCATGGGTGGATTTTTACTGAA 11134 Query 4049 ACATCCTCCGCCTCAGATCCTGATCAAGAACACGCCTGTACCTGCGGATCCTCCGACCAC 4108 | | | ||| | ||||||| ||||||||||||| | | ||||| | |||| | | Sbjct 11135 AAAGCTTCCTCTTCAGATCATGATCAAGAACACCCAGATGCCTGCTAACCCTCTGGTGGC 11194 Query 4109 CTTCA-ACCAGTCAAAGCTGAACTCTTTCATCACGCAATACAGCACCGGACAGGTCAGCG 4167 |||| || ||| | | |||||||||||||| | ||| || | || | | Sbjct 11195 TTTCACCCCCATCAGA-CAAAACTCTTTCATCACCAAGTACTCTACTAGTCAATTGGTGG 11253 Query 4168 TGGAAATTGAATGGGAGCTGCAGAAGGA 4195 | | |||||||| || || |||||||| Sbjct 11254 TAAAGATTGAATGAGAACTCCAGAAGGA 11281 >seq111540 Length=9601 Score = 104 bits (114), Expect = 6e-19 Identities = 157/220 (71%), Gaps = 5/220 (2%) Strand=Plus/Minus Query 2942 CTACTTCGGCTACAGCACCCC-CTGGGGGTATTTTGACTTTAACAGATTCCACTGCCACT 3000 |||| || | || ||||| | |||||| ||| |||| || |||||||| | |||| Sbjct 9107 CTACCTCAGTTATAGCACAACTCTGGGGATATATTGATTTCAACAGATTATAGCATCACT 9048 Query 3001 TTTCACCACGTGACTGGCAGCGACTCATCAACAACAACTGGGGATTCCGGCCCAAGAGAC 3060 || | |||||||| |||||||||||| | ||||||| || | ||||| | Sbjct 9047 GGAGTCCTAGAGACTGGCAAAGACTCATCAACAGCTGCTGGGGACTCAGACCCAAATCCC 8988 Query 3061 TCAGCTTCAAGCTCTTCAACATCCAGGTCAAGGAGGTCACGCAGAATGAA--GGCACCAA 3118 |||| ||||| ||||||||||||| |||| || || | | |||| || ||||| | Sbjct 8987 TCAGTGTCAAGGTCTTCAACATCCATATCAAAGAAGTTATG--GAATAAAATGGCACAAT 8930 Query 3119 GACCATCGCCAATAACCTCACCAGCACCATCCAGGTGTTT 3158 ||||| || || ||||| || ||| ||||| |||||| Sbjct 8929 GACCACTGCAAACAACCTGACATCCACTATCCAAGTGTTT 8890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13903240741170