Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_026815.1 Length=4613 Score E Sequences producing significant alignments: (Bits) Value seq108040 345 1e-91 seq88340 266 9e-68 seq45063 239 1e-59 seq117373 203 9e-49 seq72496 167 7e-38 seq112444 161 3e-36 seq62551 158 4e-35 seq102478 122 3e-24 seq65558 104 7e-19 >seq108040 Length=26046 Score = 345 bits (382), Expect = 1e-91 Identities = 327/415 (79%), Gaps = 2/415 (0%) Strand=Plus/Plus Query 1191 AACCCATACAAAGTATTTCATGCAATGATGTGCTGTCT-AAACAAACAAATGGGCAAAAG 1249 |||||||| || || | || |||| ||||| ||||| |||||||||| | || ||||| Sbjct 11735 AACCCATATAAGATAATCCACACAATAATGTG-TGTCTTAAACAAACAACTTGGAAAAAG 11793 Query 1250 AAACACAATCTTACTTTGTGGTCCAGCAAGTACTGGAAAAAGCCTAATAGCACAAAAAAT 1309 ||||||||| ||||| | || |||||||| |||||||||||| ||||||| |||||||| Sbjct 11794 AAACACAATTTTACTCTCAGGACCAGCAAGCACTGGAAAAAGCTTAATAGCTCAAAAAAT 11853 Query 1310 TGCTCAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAATGTTAACTTTCCATTCAA 1369 | | |||||||||||||| || |||||||||||||||||||| |||||||||||||| Sbjct 11854 CTGTGAGTTGGTTGGTAATGTCGGTTGCTACAATCCAAGCAATGTAAACTTTCCATTCAA 11913 Query 1370 CGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAGT 1429 || ||| || ||||| | || ||||| |||||||||||||| | ||| ||||| Sbjct 11914 TGACTGTTGCTCTAAAAATATCATTTGGATTGAAGAAGCAGGAAATCTAGGACACCAAGT 11973 Query 1430 AAACCAATTTAAAGCAATCATGAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCAAAGG 1489 ||||||||| ||||| || || || ||| | || ||| ||||||||||||| ||||| Sbjct 11974 AAACCAATTCAAAGCCATTTTGTCAGGACAATCTATCAGATTAGACCAAAAAGGAAAAGG 12033 Query 1490 TAGCAAAACCATCGAACCAACTCCAGTTATAATGACAACAAATGAAGACATAACAAGAGT 1549 |||||| | || |||||||| ||||| ||||||||| | |||||||| |||||| ||| Sbjct 12034 CAGCAAATCTATAGAACCAACACCAGTAATAATGACATCCAATGAAGATATAACACAAGT 12093 Query 1550 TGTGGTAGGGTCTGAACTTAGACCAGAACATAAACAACCAATCATGGACAGATGT 1604 |||| | ||||| ||||||||||| | ||||||| | |||| ||| Sbjct 12094 AAGAATAGGCTGCGAACTAAGACCAGAACACACCGAACCAATAAAACACAGGTGT 12148 Score = 96.9 bits (106), Expect = 1e-16 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 2372 GGACATAATCCATATATTAACTTCAACAACGCAGATAAGACTTTTATAAAAGACACCAAC 2431 ||||||||||| || | |||| ||| | ||||| | ||||||||| |||| || | Sbjct 12836 GGACATAATCCTTACCTATACTTTAACGAAGCAGACAGGACTTTTATTGAAGAAACAGAA 12895 Query 2432 CAAGCAAAAGACTGGGGAGGCTGGCTTGGAAACAAATTCTTTAAAATAAAAGAACACATT 2491 |||||| |||||||||||| ||| | ||||||||| || ||| ||||| | |||| Sbjct 12896 AAAGCAACAGACTGGGGAGGTTGGTTAGGAAACAAAGCTTTCAAACTAAAAAGAGCCATT 12955 Query 2492 GCTCCAAAGCT 2502 |||||||| || Sbjct 12956 GCTCCAAACCT 12966 >seq88340 Length=24873 Score = 266 bits (294), Expect = 9e-68 Identities = 257/329 (78%), Gaps = 2/329 (1%) Strand=Plus/Minus Query 1211 TGCAATGATGTGCTGTCTAAACAAACAAATGGGCAAAAGAAACACAATCTTACTTTGTGG 1270 |||||| |||||| || ||||| || | || |||||||||||||||||| | || Sbjct 11243 TGCAATAATGTGCATACTTAACAAGCAGCTAGGTAAAAGAAACACAATCTTATTACAAGG 11184 Query 1271 TCCAGCAAGTACTGGAAAAAGCCTAATAGCACAAAAAATTGCTCAATTGGTTGGTAATGT 1330 |||| || || |||||||| ||||| || ||||| || | | || ||||||||||| Sbjct 11183 ACCAGTGAGCACAGGAAAAAGTCTAATTGCTCAAAATATATGTGAGTTAGTTGGTAATGT 11124 Query 1331 AGGATGCTACAATCCAAGCAATGTTAACTTTCCATTCAACGATTGTAGCAACAAAAACCT 1390 |||||||||||| || |||||| |||||||| ||||||||||| ||||||||||| | Sbjct 11123 TGGATGCTACAATTCATCCAATGTAAACTTTCCTTTCAACGATTGCTGCAACAAAAACAT 11064 Query 1391 AATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAGTAAACCAATTTAAAGCAATCAT 1450 |||| ||| || |||||| ||||||| || ||||||||||||||||||||||| || Sbjct 11063 TATATCGATTGAGGAAGCAAGAAACTTGGGGCAGCAAGTAAACCAATTTAAAGCAATAAT 11004 Query 1451 GAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCAAAGGTAGCAAAACCATCGAACCAAC 1510 | || ||| || ||| || |||||||||| || || ||||| |||| |||||| | Sbjct 11003 GTCAGGACAA--AACAAGATTATACCAAAAAGGAAAGGGCAGCAAGTCCATTGAACCACC 10946 Query 1511 TCCAGTTATAATGACAACAAATGAAGACA 1539 |||| | ||||||||| | ||||| |||| Sbjct 10945 TCCAATAATAATGACATCTAATGAGGACA 10917 >seq45063 Length=75060 Score = 239 bits (264), Expect = 1e-59 Identities = 243/312 (78%), Gaps = 10/312 (3%) Strand=Plus/Minus Query 1230 AACAAACAAATGGGCAAAAGAAACACAAT---CTTACTTTGTGGTCCAGCAAGTACTGGA 1286 ||||||||| | | ||||| || ||| || ||||| || || | | || ||| Sbjct 22208 AACAAACAATTTGCCAAAATAAGCACCATACTCTTACAA---GGACCTGTTATTAGAGGA 22152 Query 1287 AAAAGCCTAATAGCACAAAAAATTGCTCAATTGGTTGGTAATGTAGGATGCTACAATCCA 1346 ||||| || ||| ||||||||||| | | || ||||||||||||||||| ||||||||| Sbjct 22151 AAAAGTCTCATAACACAAAAAATTTGTGAGTTAGTTGGTAATGTAGGATGTTACAATCCA 22092 Query 1347 AGCAATGTTAACTTTCCATTCAACGATTGTAGCAACAAAAACCTAATAT--GGATAGAAG 1404 | ||||||||||||| ||||| ||||| |||||||||| || ||| ||||||||| Sbjct 22091 T-CTATGTTAACTTTCCTTTCAATGATTGCTGCAACAAAAAACTTCTATAGGGATAGAAG 22033 Query 1405 AAGCAGGAAACTTTGGAACTCAAGTAAACCAATTTAAAGCAATCATGAGTGGCCAAGCAA 1464 |||| || ||||| ||| ||||||||||||||||||| ||||||| || ||| | Sbjct 22032 AAGCTGGTAACTTAGGACAGCAAGTAAACCAATTTAAAGTAATCATGTCAGGACAAAGCA 21973 Query 1465 TTAGACTAGACCAAAAAGGCAAAGGTAGCAAAACCATCGAACCAACTCCAGTTATAATGA 1524 | |||||||| ||||| | ||||||| ||| |||| |||||||||||| | ||||||| Sbjct 21972 TCAGACTAGATGAAAAA-GAAAAGGTAATAAATCCATTGAACCAACTCCAATAATAATGA 21914 Query 1525 CAACAAATGAAG 1536 || | ||||||| Sbjct 21913 CATCCAATGAAG 21902 >seq117373 Length=15221 Score = 203 bits (224), Expect = 9e-49 Identities = 191/240 (80%), Gaps = 5/240 (2%) Strand=Plus/Plus Query 1179 AATAATTCCATGAACCCATACAAAGTATTTCATGCAATGATGTGCTGT-CTAAACAAACA 1237 ||||||| || ||| || |||||| |||||||||||||||| ||| || | |||||| Sbjct 12246 AATAATTACA---ACCTATTTAAAGTAATTCATGCAATGATGTG-TGTGCTTAGCAAACA 12301 Query 1238 AATGGGCAAAAGAAACACAATCTTACTTTGTGGTCCAGCAAGTACTGGAAAAAGCCTAAT 1297 | | || |||||||| || |||||||| ||| || || || |||||||||||| |||| Sbjct 12302 ACTTGGTAAAAGAAATACCATCTTACTAAGTGAACCTGCTAGCACTGGAAAAAGCTTAAT 12361 Query 1298 AGCACAAAAAATTGCTCAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAATGTTAA 1357 ||| |||||| | | | |||||||||||||| || | ||||||||| ||||| || Sbjct 12362 AGCTTAAAAAACTTGTGACTTGGTTGGTAATGTTGGTTATTACAATCCATCAAATGTAAA 12421 Query 1358 CTTTCCATTCAACGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTT 1417 |||||||||||| || || ||||||||||| || ||||||||||| ||||||||||| Sbjct 12422 CTTTCCATTCAATGACTGCTGCAACAAAAACACTATCTGGATAGAAGAGGCAGGAAACTT 12481 >seq72496 Length=32857 Score = 167 bits (184), Expect = 7e-38 Identities = 283/419 (68%), Gaps = 36/419 (9%) Strand=Plus/Plus Query 1187 CATG-AACCCATACAAAGTATTTCATGCAATGATGTGCTGTCTAAACAAACAAATGGGCA 1245 |||| |||||||||||||| |||||||||| |||||| |||||||| ||| | || | Sbjct 17018 CATGCAACCCATACAAAGTGATTCATGCAATAATGTGCGTGCTAAACAAGCAACTAGGTA 17077 Query 1246 AAAGAAACACAATCTTACTTTGTGGTCCAGCAAGTACTGGAAAAAGCCTAATAGCACAAA 1305 ||||||| |||||| |||| ||| |||||||| |||||||||| Sbjct 17078 AAAGAAATACAATCCTACTAAATGGGCCAGCAAGCACTGGAAAAANNNNNNNNNN----- 17132 Query 1306 AAATTGCTCAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAATGTTAACTTTCCAT 1365 ||||| ||||||||| ||||| || ||| ||| Sbjct 17133 --------------------------GGATGTTACAATCCATCTAATGTGAATTTTTCAT 17166 Query 1366 TCAACGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTTTGGAACTC 1425 | | || || |||| ||||| ||||||| |||| | ||||| ||| | || | Sbjct 17167 TTAT-GACTGCTGCAATAAAAAGATAATATG---AGAACAGGCAGGTAACCTAGGTCAGC 17222 Query 1426 AAGTAAACCAATTTAAAGCAATCATGAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCA 1485 ||||||||||||||||| | || ||| || ||| || ||||||| ||||| || | Sbjct 17223 AAGTAAACCAATTTAAATCGATAATGTCAGGACAAAGCATAAGACTAGGTCAAAAGGGGA 17282 Query 1486 AAGGTAGCAAAACCATCGAACCAACTCCAGTTATAATGACAACAAATGAAGACATAACAA 1545 | || || |||||||| |||||||| || || ||||||||| | | |||||||| |||| Sbjct 17283 AGGGCAGTAAAACCATTGAACCAACACCTGTCATAATGACATCCAGTGAAGACACAACAG 17342 Query 1546 GAGTTGTGGTAGGGTCTGAACTTAGACCAGAACATAAACAACCAATCATGGACAGATGT 1604 ||| | || | ||| | ||||| |||| | | ||| ||| | |||||||| Sbjct 17343 TAGTAAGAATTGGTTGTGAGATCAGACCTGAACTCACAGAACAAATAAGACACAGATGT 17401 >seq112444 Length=40188 Score = 161 bits (178), Expect = 3e-36 Identities = 180/244 (74%), Gaps = 21/244 (9%) Strand=Plus/Plus Query 1300 CACAAAAAATTGCTCAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAATGTTAACT 1359 ||||| | ||| | | || ||| ||| ||||||||||||||||||| ||| |||||| Sbjct 11074 CACAATACATTTGTGAGTTAGTTAGTATTGTAGGATGCTACAATCCATCTAATCTTAACT 11133 Query 1360 TTCCATTCAACGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTTTG 1419 || | ||||| ||| | |||||||||| ||| ||||| | Sbjct 11134 TTTCTTTCAATGATAGCTGCAACAAAAA-----TATT----------------AACTTAG 11172 Query 1420 GAACTCAAGTAAACCAATTTAAAGCAATCATGAGTGGCCAAGCAATTAGACTAGACCAAA 1479 || |||||||||||||||||||||| ||| || ||| ||||||||||||| || Sbjct 11173 GACAATAAGTAAACCAATTTAAAGCAATTATGTCAGGACAAAGCATTAGACTAGACCCAA 11232 Query 1480 AAGGCAAAGGTAGCAAAACCATCGAACCAACTCCAGTTATAATGACAACAAATGAAGACA 1539 |||| ||||| |||||| | || |||||||||| ||| ||||||||| | |||||||||| Sbjct 11233 AAGGGAAAGGCAGCAAATCTATTGAACCAACTCTAGTAATAATGACACCTAATGAAGACA 11292 Query 1540 TAAC 1543 |||| Sbjct 11293 TAAC 11296 >seq62551 Length=99649 Score = 158 bits (174), Expect = 4e-35 Identities = 262/369 (71%), Gaps = 12/369 (3%) Strand=Plus/Plus Query 1178 AAATAATTCCATGAACCCATACAAAGTATTTCATGCAATGATGTGCTGTCTAAACAAACA 1237 |||||||| || || || |||||||| | |||||| | || || |||| |||||| Sbjct 51261 AAATAATT--AT-AATCCTTACAAAGTTATACATGCATCG---TGTTGCCTAA-CAAACA 51313 Query 1238 AATGGGCAAAAGAAACACAATCTTACTTTGTGGTCCAGCAAGTACTGGAAAAAGCCTAAT 1297 |||||| | ||||| | | |||||||| ||||||| || ||||| ||| | || Sbjct 51314 AATGGGTGAGAGAAATATA-TCTTACTTAATGGTCCAATAAACACTGGCAAATCTCACAT 51372 Query 1298 AGCACAAAAAATTGCT--CAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAATGTT 1355 |||||| || | || || || ||||||||| | || ||||||||| || || | | Sbjct 51373 AGCACAGAATCTCTCTGCCACTTAGTTGGTAATATTGGTTGCTACAATGCA-GCTAACAT 51431 Query 1356 AAC-TTTCCATTCAACGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAA 1414 | | ||||| ||||| || |||| | || |||| || | ||| | || || |||| ||| Sbjct 51432 ATCATTTCCTTTCAATGACTGTACCTGCAGAAACATAGTTTGGGTTGAGGAGGCAGAAAA 51491 Query 1415 CTTTGGAACTCAAGTAAACCAATTTAAAGCAATCATGAGTGGCCAAGCAATTAGACTAGA 1474 | ||| ||| | | ||||| ||| | | ||| || || || ||||| |||| Sbjct 51492 TCTAGGATAGCAAATCGATCAATTCAAACAACTAATGCTAGGGCAGACAGTTAGAATAGA 51551 Query 1475 CCAAAAAGGCAAAGGTAGCAAAACCATCGAACCAACTCCAGTTATAATGACAACAAATGA 1534 |||||||| ||| | ||||||||||| |||||||| | || || |||| || ||||| Sbjct 51552 TCAAAAAGGGAAAAGAAGCAAAACCATAGAACCAACACTTGTAATCATGATCACCAATGA 51611 Query 1535 AGACATAAC 1543 ||||||| Sbjct 51612 GAACATAAC 51620 >seq102478 Length=16333 Score = 122 bits (134), Expect = 3e-24 Identities = 223/316 (71%), Gaps = 17/316 (5%) Strand=Plus/Minus Query 1233 AAACAAATGGGCAAAAGAAACACAATCTTACTTTGTGGTCCAGCAAGTACTGGAAAAAGC 1292 ||| ||||||| |||| ||| | |||||||| | | |||| | || ||| ||||| | Sbjct 9518 AAATAAATGGGAAAAA-AAATTCTATCTTACTATATAGTCCTACTAGCACT--AAAAATC 9462 Query 1293 CT-AATAGCACAAAAAATTGCTCAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAA 1351 | |||| |||||||| | | | | ||| ||||| | |||||||||||| || Sbjct 9461 ATTAATAACACAAAAACTATGTTACCTAACTGGAAATGTTCGTTGCTACAATCCAGTAAA 9402 Query 1352 TGTTAACTTTCCATTCAACGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGG 1411 ||| | |||||||||||| || || | ||||||| |||||||| | ||| ||| | | Sbjct 9401 TGTGAGCTTTCCATTCAATGACTGCACTCACAAAAATGTAATATGGGT-GAATAAGGAAG 9343 Query 1412 AAACTTTGGAAC-TCAAGTAAACCAATTTAAAGCAATCATGAGTGGCCAAGCAATTAGAC 1470 | | || | ||||| |||||||| ||| | | || |||| |||||||| Sbjct 9342 A----CTAGATCAACAAGTCAACCAATTCAAACAAGTGATATGTGG----ACAATTAGAA 9291 Query 1471 TAGACCAAAAAGGCAAAGGTAGCAAAACCATC-GAACCAACTCCAGTTATAATGACAACA 1529 |||| ||||| | ||||| | ||||| || | |||| | |||||| | |||||| | | Sbjct 9290 TAGA-TAAAAAAGTAAAGG-ATCAAAAACAACTGAACTTATTCCAGTGACAATGACTAAA 9233 Query 1530 AATGAAGACATAACAA 1545 ||||| || || |||| Sbjct 9232 AATGAGGATATTACAA 9217 >seq65558 Length=45570 Score = 104 bits (114), Expect = 7e-19 Identities = 237/350 (68%), Gaps = 25/350 (7%) Strand=Plus/Plus Query 1195 CATACAAAGTATTTCATGCAATGATGTGCTGTCTAAACAAACAAATGGGCAAAAGAAACA 1254 |||| ||||| |||||| || || ||||| | |||| | |||| |||||||| | Sbjct 45225 CATATAAAGTGGCTCATGCTATAATATGCTGATTGAACAGA----TGGGAAAAAGAAATA 45280 Query 1255 CAATCTTACTTTGTGGTCCAGCAAGTACTGGAAAAAGCCTAATAGCACAAAAAAT-TGCT 1313 | |||||||| ||| ||| | ||| || ||| | | ||||| | || || ||| Sbjct 45281 CCATCTTACTAAATGGGCCATCTCTTACAGGGAAATCCTTTATAGCCCCCAAGATATGC- 45339 Query 1314 CAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAATGTTAACTTTCCATTCAACGAT 1373 || | ||||| ||||| || ||||||| || | | || || || | ||||| || Sbjct 45340 CAGCTTGTTGGAAATGTTGGTTGCTACAGTCAAGGAAACATTTCATTCCTATTCAGTGAC 45399 Query 1374 TGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAGTAAAC 1433 | || | |||||| |||| ||||||||| ||||| | || ||||||||| Sbjct 45400 TCTACTCATAAAAAC-----ATGGGTAGAAGAAGTTGGAAATCTCAGATGGCAAGTAAAC 45454 Query 1434 CAATTTAAAGCAATCATGAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCAAAGGTAGC 1493 | | ||||| ||| ||| || | || | ||| ||||||| ||||| Sbjct 45455 C-AGTTAAAACAA--CTGA-TGTC--AGGA--------AGATCAAAAAGAAAAAGGCTCA 45500 Query 1494 AAAACCATCGAACCAACTCCAGTTATAATGACAACAAATGAAGACATAAC 1543 ||||| || |||| |||||||| || |||||||| |||||| | ||||| Sbjct 45501 AAAACAATTGAACTTACTCCAGTAATCATGACAACCAATGAAAATATAAC 45550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14605102366470