Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_027429.1 Length=4590 Score E Sequences producing significant alignments: (Bits) Value seq23094 163 8e-37 seq67558 78.8 3e-11 >seq23094 Length=55390 Score = 163 bits (180), Expect = 8e-37 Identities = 481/725 (66%), Gaps = 31/725 (4%) Strand=Plus/Plus Query 2665 ATGGCTCAAGGAGGTGGCGGACCAATGGCAGACGATAACCAAGGCGCCGAGGGAGTGGGT 2724 ||||| |||||||||| | |||||||| | || | || || || || |||| ||| Sbjct 39639 ATGGCAGAAGGAGGTGGAGTACCAATGGGCAATAATCAACAGGGTGCTGATAGAGTAGGT 39698 Query 2725 AATGCCTCGGGAGATTGGCATTGCGATACCCAATGGCTGGGCGACCACGTCATTAC---A 2781 ||| | | |||| ||| |||||| | | | |||||| ||||| || |||| || | Sbjct 39699 AATTCTTTGGGAAATTAGCATTGTGGTTCTCAATGGATGGGCCACAGAGTCACCACCCGA 39758 Query 2782 AAATCTACCAGAACTTGGGTTCTGCCCTCTTACGGGAATCATCTCTACTCGCCCATCAAC 2841 ||| || | ||||| ||| | | | || || |||||| || |||| Sbjct 39759 AAAGCTCTC------TGGGTCTCGCCTACCTGCAACAACCACCTCTACAAGCAGTTCAAA 39812 Query 2842 TTTGATGGAACCACAGGGAACGGAACCCAAGCCGCTTACTGCGGATAC-GCTACCCCCTG 2900 | | || |||||||| | | |||| | |||| || | | ||| ||||||| Sbjct 39813 ATAG-TGCCACCACAGGCAGTG----CCAA--CAACTACTTTGGCTTCAGCT-CCCCCTG 39864 Query 2901 GGCCTACTTTGACTTTAACCGATTCCACTGCCACTTTTCCCCCCGAGACTGGCAAAGACT 2960 || | |||||||| ||| |||||||||||||||| |||| |||||||||||||||| Sbjct 39865 GGGGAATTTTGACTTCAACAGATTCCACTGCCACTTCAGCCCCTGAGACTGGCAAAGACT 39924 Query 2961 CATTAACAACCATACCGGAATACGACCAGTCGGACTCAAATTCAAGCTGTTCAACATCCA 3020 || || ||| | ||| | ||||| || | ||||| || ||||||||||| Sbjct 39925 TATCAATAACAACTGGGGACTGCGACCTAAAAACCTGCACTTCAAACTCTTCAACATCCA 39984 Query 3021 GGTCAAGGAAATCAC-AGTACAAGATTCGACCAAAACGATCGCCAACAATCTCACCAGCA 3079 ||||||||| |||| || | | | || | || || || || || || ||||||| Sbjct 39985 AGTCAAGGAAGTCACAAGGAGGAATGTTGA-AACCACAATTGCTAATAACCTTACCAGCA 40043 Query 3080 CCGTACAGGTCTTTGCGGACACGGAGCACCAGCTCCCGTACGT-ATTAGGAAATGC-CAC 3137 | || |||||||||||| | ||| || ||||| || || || ||| | ||| || Sbjct 40044 TGATTCAAGTCTTTGCGGACTCAGAGTGTCAACTCCCATATGTGATCAGG-AGTGCTCAA 40102 Query 3138 GCAGGGCACGTTTCCTCCCTTTCCGGCTGAAGTCTTTCAGTTGCCTCAGTACGGCTACTG 3197 | || | | | ||||| || |||| || ||| |||||||||||| || || || Sbjct 40103 G-AGAGGTGCCTACTCCCCTTCCCTCCTGATGTGTTTATGTTGCCTCAGTATGGATATTG 40161 Query 3198 TACCAT--CCAAGGCCCTCAGGGTAAGTTTACCGACAGAAGTGCCTTCTACTGCTTGGAG 3255 ||| | ||| | || ||||||| || || || || ||||||| | || Sbjct 40162 TACTTTGGACAATG---ATGGGAAAAGTTTA--GAGAGGAGCGCATTCTACTTTCTAGAA 40216 Query 3256 TACTTTCCTTCCAAGATGCTGAGAACGGGGAATAACTTTGAATTTACTTACAAGTTCGAG 3315 | |||||| | | || |||||| ||| || ||||||| |||| | || || || Sbjct 40217 CATTTTCCTAACCAAATATTGAGAATGGGTAACAACTTTGCATTTTCCTATGCTTTTGAA 40276 Query 3316 AAGGTTCCCTTCCATTCTGGCTGGGCTCAAAGCCAGTCGTTGGATCGATTGATGAATCCC 3375 || ||||| ||| ||| || | ||| |||||| ||||||||||||| Sbjct 40277 TCTGTCCCCTTTCATAGCATGTGGATACATAATCAGAGCTTGGATAGATTGATGAATCCA 40336 Query 3376 TTGAT 3380 ||||| Sbjct 40337 TTGAT 40341 Score = 80.6 bits (88), Expect = 8e-12 Identities = 131/187 (70%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 1328 AAGGAATACGGAAAAAGGAATACCATCTGGCTCTACGGACCAGCTACCACCGGAAAGACT 1387 || |||| || ||||| || ||||||||| |||| ||| || || || || || ||| Sbjct 38298 AAAGAATTTGGCAAAAGAAACACCATCTGGGTCTATGGAAAGGCCACTACTGGGAACACT 38357 Query 1388 ATTATAGCGCAAGCTATAGCCCAC--GGTGCTGTCCTCTTTGGAGGAGTCAATTGGACTA 1445 | || | | |||| | || ||| ||||| | ||| || || |||||||||| Sbjct 38358 AACATTGTGGAAGCCGTTGCACACACGGTGCCCT--TCTACGGGTATGTGAATTGGACTA 38415 Query 1446 ATGAAAACTTTCCCTTTTGTAATTGTCCTGGTAAACTGTTGATATGGTGGGAAGAGGGTA 1505 |||| |||||||| || || ||||| | |||| || | || |||||||| || || | Sbjct 38416 ATGAGAACTTTCCATTCAGTGATTGTGTGGATAAAATGCTCATCTGGTGGGAGGAAGGCA 38475 Query 1506 AAATGAC 1512 | || || Sbjct 38476 AGATTAC 38482 >seq67558 Length=25472 Score = 78.8 bits (86), Expect = 3e-11 Identities = 103/143 (72%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 3871 GTCTGGTCCAACAGAGATATTTACCTGCAAGGTCCCATCTGGGCTAAAATACCCGATACC 3930 ||||||| ||||||| || || || ||||||| || | ||| || || || || | Sbjct 10639 GTCTGGTAGGACAGAGACATCTATCTACAAGGTCTGATGTAGGCCAAGATTCCTCATGCT 10580 Query 3931 GATGGACACTTTCACCCGTCTCCACAAATGGGTGGTTTCGGACTTAAAAACCCACCACCG 3990 ||||||||||| ||| || || | |||||||||| ||||| ||||| || || || Sbjct 10579 GATGGACACTTCCACAATTCACCTCTGCTGGGTGGTTTTGGACTGAAAAATCCTCCTCCT 10520 Query 3991 ATGATCCTCATCAAAAACACACC 4013 || | | ||||| ||||| || Sbjct 10519 CAGAACATGATCAAGAACACTCC 10497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14531725923825