Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_028650.1 Length=4634 Score E Sequences producing significant alignments: (Bits) Value seq108040 336 6e-89 seq88340 253 6e-64 seq45063 205 3e-49 seq117373 163 8e-37 seq62551 156 1e-34 seq112444 132 1e-27 seq72496 114 4e-22 seq65558 113 1e-21 seq102478 111 5e-21 seq7517 78.8 3e-11 >seq108040 Length=26046 Score = 336 bits (372), Expect = 6e-89 Identities = 312/393 (79%), Gaps = 2/393 (1%) Strand=Plus/Plus Query 1321 CAATTATGTGCTGTCT-AAACAAACAGATGGGAAAAAGAAACACAATTCTACTTTGTGGT 1379 |||| ||||| ||||| ||||||||| | |||||||||||||||||| |||| | || Sbjct 11757 CAATAATGTG-TGTCTTAAACAAACAACTTGGAAAAAGAAACACAATTTTACTCTCAGGA 11815 Query 1380 CCAGCAAGTACAGGAAAAAGCTTACTAGCACAAAAAATAGCTCAGTTAGTTGGAAATGTA 1439 |||||||| || |||||||||||| |||| |||||||| | |||| ||||| ||||| Sbjct 11816 CCAGCAAGCACTGGAAAAAGCTTAATAGCTCAAAAAATCTGTGAGTTGGTTGGTAATGTC 11875 Query 1440 GGTTGCTACAACGCTAGCAATGTAAACTTTCCATTCAATGATTGTAGCAACAAAAACCTA 1499 ||||||||||| | |||||||||||||||||||||||||| ||| || ||||| | Sbjct 11876 GGTTGCTACAATCCAAGCAATGTAAACTTTCCATTCAATGACTGTTGCTCTAAAAATATC 11935 Query 1500 ATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAGTAAACCAATTCAAAGCAATCATG 1559 || ||||| |||||||||||||| | ||| |||||||||||||||||||| || || Sbjct 11936 ATTTGGATTGAAGAAGCAGGAAATCTAGGACACCAAGTAAACCAATTCAAAGCCATTTTG 11995 Query 1560 AGTGGTCAATCAATCAGACTAGACCAAAAAGGCAAAGGCAGCAAAACCATAGAACCAACT 1619 || ||||| |||||| ||||||||||||| |||||||||||| | ||||||||||| Sbjct 11996 TCAGGACAATCTATCAGATTAGACCAAAAAGGAAAAGGCAGCAAATCTATAGAACCAACA 12055 Query 1620 CCAGTAATTATGACCACAAATGAAGACATTACTAAGGTCGTGGTAGGGTCAGAACTTAGA 1679 |||||||| ||||| | |||||||| || || | || |||| | ||||| ||| Sbjct 12056 CCAGTAATAATGACATCCAATGAAGATATAACACAAGTAAGAATAGGCTGCGAACTAAGA 12115 Query 1680 CCTGAACACAAACAACCAATCATGGACAGATGT 1712 || ||||||| ||||||| | |||| ||| Sbjct 12116 CCAGAACACACCGAACCAATAAAACACAGGTGT 12148 >seq88340 Length=24873 Score = 253 bits (280), Expect = 6e-64 Identities = 257/334 (77%), Gaps = 2/334 (1%) Strand=Plus/Minus Query 1319 TGCAATTATGTGCTGTCTAAACAAACAGATGGGAAAAAGAAACACAATTCTACTTTGTGG 1378 |||||| |||||| || ||||| ||| | || |||||||||||||| || | || Sbjct 11243 TGCAATAATGTGCATACTTAACAAGCAGCTAGGTAAAAGAAACACAATCTTATTACAAGG 11184 Query 1379 TCCAGCAAGTACAGGAAAAAGCTTACTAGCACAAAAAATAGCTCAGTTAGTTGGAAATGT 1438 |||| || ||||||||||| || | || ||||| ||| | |||||||||| ||||| Sbjct 11183 ACCAGTGAGCACAGGAAAAAGTCTAATTGCTCAAAATATATGTGAGTTAGTTGGTAATGT 11124 Query 1439 AGGTTGCTACAACGCTAGCAATGTAAACTTTCCATTCAATGATTGTAGCAACAAAAACCT 1498 || |||||||| | ||||||||||||||| ||||| ||||| ||||||||||| | Sbjct 11123 TGGATGCTACAATTCATCCAATGTAAACTTTCCTTTCAACGATTGCTGCAACAAAAACAT 11064 Query 1499 AATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAGTAAACCAATTCAAAGCAATCAT 1558 |||| ||| || |||||| ||||||| || |||||||||||||| |||||||| || Sbjct 11063 TATATCGATTGAGGAAGCAAGAAACTTGGGGCAGCAAGTAAACCAATTTAAAGCAATAAT 11004 Query 1559 GAGTGGTCAATCAATCAGACTAGACCAAAAAGGCAAAGGCAGCAAAACCATAGAACCAAC 1618 | || ||| || ||| || |||||||||| || |||||||| |||| |||||| | Sbjct 11003 GTCAGGACAA--AACAAGATTATACCAAAAAGGAAAGGGCAGCAAGTCCATTGAACCACC 10946 Query 1619 TCCAGTAATTATGACCACAAATGAAGACATTACT 1652 |||| |||| ||||| | ||||| |||| |||| Sbjct 10945 TCCAATAATAATGACATCTAATGAGGACACTACT 10912 >seq45063 Length=75060 Score = 205 bits (226), Expect = 3e-49 Identities = 203/259 (78%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 1388 TACAGGAAAAAGCTTACTAGCACAAAAAATAGCTCAGTTAGTTGGAAATGTAGGTTGCTA 1447 || ||||||||| | || |||||||||| | |||||||||| |||||||| || || Sbjct 22158 TAGAGGAAAAAGTCTCATAACACAAAAAATTTGTGAGTTAGTTGGTAATGTAGGATGTTA 22099 Query 1448 CAACGCTAGCAATGTAAACTTTCCATTCAATGATTGTAGCAACAAAAACCTAATAT--GG 1505 ||| | | | |||| |||||||| ||||||||||| |||||||||| || ||| || Sbjct 22098 CAATCC-ATCTATGTTAACTTTCCTTTCAATGATTGCTGCAACAAAAAACTTCTATAGGG 22040 Query 1506 ATAGAAGAAGCAGGAAACTTTGGAACTCAAGTAAACCAATTCAAAGCAATCATGAGTGGT 1565 ||||||||||| || ||||| ||| |||||||||||||| |||| ||||||| || Sbjct 22039 ATAGAAGAAGCTGGTAACTTAGGACAGCAAGTAAACCAATTTAAAGTAATCATGTCAGGA 21980 Query 1566 CAATCAATCAGACTAGACCAAAAAGGCAAAGGCAGCAAAACCATAGAACCAACTCCAGTA 1625 ||| ||||||||||| ||||| | ||||| | ||| |||| |||||||||||| || Sbjct 21979 CAAAGCATCAGACTAGATGAAAAA-GAAAAGGTAATAAATCCATTGAACCAACTCCAATA 21921 Query 1626 ATTATGACCACAAATGAAG 1644 || ||||| | ||||||| Sbjct 21920 ATAATGACATCCAATGAAG 21902 >seq117373 Length=15221 Score = 163 bits (180), Expect = 8e-37 Identities = 169/219 (77%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 1308 aaaGTATTTCATGCAATTATGTGCTGT-CTAAACAAACAGATGGGAAAAAGAAACACAAT 1366 |||||| |||||||||| ||||| ||| || | |||||| | || |||||||| || || Sbjct 12264 AAAGTAATTCATGCAATGATGTG-TGTGCTTAGCAAACAACTTGGTAAAAGAAATACCAT 12322 Query 1367 TCTACTTTGTGGTCCAGCAAGTACAGGAAAAAGCTTACTAGCACAAAAAATAGCTCAGTT 1426 |||| ||| || || || || |||||||||||| |||| |||||| | | || Sbjct 12323 CTTACTAAGTGAACCTGCTAGCACTGGAAAAAGCTTAATAGCTTAAAAAACTTGTGACTT 12382 Query 1427 AGTTGGAAATGTAGGTTGCTACAACGCTAGCAATGTAAACTTTCCATTCAATGATTGTAG 1486 ||||| ||||| |||| ||||| | ||||||||||||||||||||||| || | Sbjct 12383 GGTTGGTAATGTTGGTTATTACAATCCATCAAATGTAAACTTTCCATTCAATGACTGCTG 12442 Query 1487 CAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTT 1525 |||||||||| || ||||||||||| ||||||||||| Sbjct 12443 CAACAAAAACACTATCTGGATAGAAGAGGCAGGAAACTT 12481 >seq62551 Length=99649 Score = 156 bits (172), Expect = 1e-34 Identities = 267/377 (71%), Gaps = 14/377 (4%) Strand=Plus/Plus Query 1286 AAATAATAATATGAATCCaaaaaaaGTATTTCATGCAATTATGTGCTGTCTAAACAAACA 1345 ||||||| ||| |||| | ||||| | |||||| ||| || |||| |||||| Sbjct 51261 AAATAATTATA---ATCCTTACAAAGTTATACATGCATC---GTGTTGCCTAA-CAAACA 51313 Query 1346 GATGGGAAAAAGAAACACAATTCTACTTTGTGGTCCAGCAAGTACAGGAAAAAGCTTAC- 1404 ||||| | ||||| | | | ||||| ||||||| || || || ||| || || Sbjct 51314 AATGGGTGAGAGAAATATATCT-TACTTAATGGTCCAATAAACACTGGCAAAT-CTCACA 51371 Query 1405 TAGCACAAAAAATAGCT--CAGTTAGTTGGAAATGTAGGTTGCTACAACGCTAGC-AATG 1461 ||||||| || | || || |||||||| ||| | ||||||||||| || ||| || Sbjct 51372 TAGCACAGAATCTCTCTGCCACTTAGTTGGTAATATTGGTTGCTACAATGC-AGCTAACA 51430 Query 1462 TAAACTTTCCATTCAATGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAA 1521 || ||||| |||||||| |||| | || |||| || | ||| | || || |||| || Sbjct 51431 TATCATTTCCTTTCAATGACTGTACCTGCAGAAACATAGTTTGGGTTGAGGAGGCAGAAA 51490 Query 1522 ACTTTGGAACTCAAGTAAACCAATTCAAAGCAATCATGAGTGGTCAATCAATCAGACTAG 1581 | | ||| ||| | | ||||||||| | | ||| || || || | ||| ||| Sbjct 51491 ATCTAGGATAGCAAATCGATCAATTCAAACAACTAATGCTAGGGCAGACAGTTAGAATAG 51550 Query 1582 ACCAAAAAGGCAAAGGCAGCAAAACCATAGAACCAACTCCAGTAATTATGACCACAAATG 1641 | |||||||| ||| | |||||||||||||||||||| | ||||| |||| ||| |||| Sbjct 51551 ATCAAAAAGGGAAAAGAAGCAAAACCATAGAACCAACACTTGTAATCATGATCACCAATG 51610 Query 1642 AAGACATTACTAAGGTC 1658 | |||| ||| | ||| Sbjct 51611 AGAACATAACTGAAGTC 51627 Score = 77.0 bits (84), Expect = 1e-10 Identities = 99/135 (73%), Gaps = 4/135 (3%) Strand=Plus/Plus Query 3103 ATGCAAACGCATGGGGATGCTGGATGTCTCCTGCAGACTTCCAACATATGTCTACCATCT 3162 ||||||| |||||||| ||||||||||| |||||||||||| ||| | | || | Sbjct 53020 ATGCAAATGCATGGGGTGTATGGATGTCTCCATCAGACTTCCAACTCATGACAA--ATGT 53077 Query 3163 G--TACTGAACTCTCCATTGAAACTTTAGAACAACAAATAGACAATATTGTTGTCAAAAC 3220 | | ||| || | ||||| ||||||||||| || || || |||| | | ||||| Sbjct 53078 GGTCAGTGATCTAAACCTTGAATCTTTAGAACAAGAATTACTTAACATTGCTATTAAAAC 53137 Query 3221 AGTAACCACACAAGG 3235 |||||| |||||| Sbjct 53138 AGTAACTGAACAAGG 53152 >seq112444 Length=40188 Score = 132 bits (146), Expect = 1e-27 Identities = 165/230 (72%), Gaps = 21/230 (9%) Strand=Plus/Plus Query 1423 AGTTAGTTGGAAATGTAGGTTGCTACAACGCTAGCAATGTAAACTTTCCATTCAATGATT 1482 |||||||| | | |||||| |||||||| | ||| | |||||| | ||||||||| Sbjct 11089 AGTTAGTTAGTATTGTAGGATGCTACAATCCATCTAATCTTAACTTTTCTTTCAATGATA 11148 Query 1483 GTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAGTAAACC 1542 | |||||||||| ||| ||||| ||| ||||||||| Sbjct 11149 GCTGCAACAAAAA-----TATT----------------AACTTAGGACAATAAGTAAACC 11187 Query 1543 AATTCAAAGCAATCATGAGTGGTCAATCAATCAGACTAGACCAAAAAGGCAAAGGCAGCA 1602 |||| |||||||| ||| || ||| || |||||||||| |||||| |||||||||| Sbjct 11188 AATTTAAAGCAATTATGTCAGGACAAAGCATTAGACTAGACCCAAAAGGGAAAGGCAGCA 11247 Query 1603 AAACCATAGAACCAACTCCAGTAATTATGACCACAAATGAAGACATTACT 1652 || | || |||||||||| |||||| ||||| | ||||||||||| ||| Sbjct 11248 AATCTATTGAACCAACTCTAGTAATAATGACACCTAATGAAGACATAACT 11297 >seq72496 Length=32857 Score = 114 bits (126), Expect = 4e-22 Identities = 253/371 (68%), Gaps = 20/371 (5%) Strand=Plus/Plus Query 1458 AATGTAAACTTTCCATTCAATGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCA 1517 ||||| || ||| |||| | ||| || |||| ||||| ||||||| |||| | ||| Sbjct 17151 AATGTGAATTTTTCATTTA-TGACTGCTGCAATAAAAAGATAATATG---AGAACAGGCA 17206 Query 1518 GGAAACTTTGGAACTCAAGTAAACCAATTCAAAGCAATCATGAGTGGTCAATCAATCAGA 1577 || ||| | || |||||||||||||| ||| | || ||| || ||| || ||| Sbjct 17207 GGTAACCTAGGTCAGCAAGTAAACCAATTTAAATCGATAATGTCAGGACAAAGCATAAGA 17266 Query 1578 CTAGACCAAAAAGGCAAAGGCAGCAAAACCATAGAACCAACTCCAGTAATTATGACCACA 1637 |||| ||||| || || ||||| |||||||| |||||||| || || || ||||| | Sbjct 17267 CTAGGTCAAAAGGGGAAGGGCAGTAAAACCATTGAACCAACACCTGTCATAATGACATCC 17326 Query 1638 AATGAAGACATTAC--TA--AGGTCGTGGTAGGGTCAGAACTTAGACCTGAACACAAACA 1693 | |||||||| || || | | |||| || ||| | |||||||||| || | | Sbjct 17327 AGTGAAGACACAACAGTAGTAAGAATTGGT--TGTGAGA--TCAGACCTGAACTCACAGA 17382 Query 1694 ACCAATCATGGACAGATGTATACAAATACGCTTAACCACAAGACTTCCTGGAGACTTTGG 1753 || ||| | |||||||| | | ||| | | | ||||||||| | || || | Sbjct 17383 ACAAATAAGACACAGATGTGTCAATATAAGACT--CGACAAGACTT--TAGATGGTTGGC 17438 Query 1754 TTTACTTAATAATGGA----GAAATTCCAAGCATCTTCAGAAGACTAGAAAGAAAAGGCT 1809 || | |||| | || || || |||| ||| || | || || ||| | |||||| Sbjct 17439 TTGGCATAATCAAAGATCATGAGATACCAAACATATTAAAAACGCTTGAAGCAGAAGGCT 17498 Query 1810 ACAAACCAACC 1820 | | |||||| Sbjct 17499 ATCATCCAACC 17509 >seq65558 Length=45570 Score = 113 bits (124), Expect = 1e-21 Identities = 239/355 (67%), Gaps = 25/355 (7%) Strand=Plus/Plus Query 1299 AATCCaaaaaaaGTATTTCATGCAATTATGTGCTGTCTAAACAAACAGATGGGAAAAAGA 1358 ||| || | ||||| |||||| || || ||||| | |||| ||||||||||||| Sbjct 45221 AATTCATATAAAGTGGCTCATGCTATAATATGCTGATTGAACA----GATGGGAAAAAGA 45276 Query 1359 AACACAATTCTACTTTGTGGTCCAGCAAGTACAGGAAAAAGCTTACTAGCACAAAAAATA 1418 || || || |||| ||| ||| | |||||| ||| ||| |||| | || ||| Sbjct 45277 AATACCATCTTACTAAATGGGCCATCTCTTACAGGGAAATCCTTTATAGCCCCCAAGATA 45336 Query 1419 GCTCAGTTAGTTGGAAATGTAGGTTGCTACAACGCTAGCAATGTAAACTTTCC-ATTCAA 1477 ||| | ||||||||||| ||||||||| | | || || | |||| ||||| Sbjct 45337 TGCCAGCTTGTTGGAAATGTTGGTTGCTAC-AGTCAAGGAAACATTTCATTCCTATTCAG 45395 Query 1478 TGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAGT 1537 ||| | || | |||||| |||| ||||||||| ||||| | || ||||| Sbjct 45396 TGACTCTACTCATAAAAAC-----ATGGGTAGAAGAAGTTGGAAATCTCAGATGGCAAGT 45450 Query 1538 AAACCAATTCAAAGCAATCATGAGTGGTCAATCAATCAGACTAGACCAAAAAGGCAAAGG 1597 |||||| || ||| | | ||| |||| ||| ||||||| ||||| Sbjct 45451 AAACCAGTTAAAACAACTGATG-------------TCAG-GAAGATCAAAAAGAAAAAGG 45496 Query 1598 CAGCAAAACCATAGAACCAACTCCAGTAATTATGACCACAAATGAAGACATTACT 1652 | ||||| || |||| ||||||||||| ||||| || |||||| | || ||| Sbjct 45497 CTCAAAAACAATTGAACTTACTCCAGTAATCATGACAACCAATGAAAATATAACT 45551 >seq102478 Length=16333 Score = 111 bits (122), Expect = 5e-21 Identities = 219/316 (69%), Gaps = 15/316 (5%) Strand=Plus/Minus Query 1341 AAACAGATGGGAAAAAGAAACACAATTCTACTTTGTGGTCCAGCAAGTACAGGAAAAAGC 1400 ||| | |||||||||| ||| | || |||| | | |||| | || || ||||| | Sbjct 9518 AAATAAATGGGAAAAA-AAATTCTATCTTACTATATAGTCCTACTAGCACT--AAAAATC 9462 Query 1401 -TTACTAGCACAAAAAATAGCTCAGTTAGTTGGAAATGTAGGTTGCTACAACGCTAGCAA 1459 ||| || |||||||| || | | || ||||||||| |||||||||| | || Sbjct 9461 ATTAATAACACAAAAACTATGTTACCTAACTGGAAATGTTCGTTGCTACAATCCAGTAAA 9402 Query 1460 TGTAAACTTTCCATTCAATGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGG 1519 ||| | ||||||||||||||| || | ||||||| |||||||| | ||| ||| | | Sbjct 9401 TGTGAGCTTTCCATTCAATGACTGCACTCACAAAAATGTAATATGGGT-GAATAAGGAAG 9343 Query 1520 AAACTTTGGAAC-TCAAGTAAACCAATTCAAAGCAATCATGAGTGGTCAATCAATCAGAC 1578 | | || | ||||| |||||||||||| | | || |||| |||| ||| Sbjct 9342 A----CTAGATCAACAAGTCAACCAATTCAAACAAGTGATATGTGG----ACAATTAGAA 9291 Query 1579 TAGACCAAAAAGGCAAAGGCAGCAAAACCATAGAACCAACTCCAGTAATTATGACCACAA 1638 |||| ||||| | ||||| ||||| | |||| | |||||| | ||||| | || Sbjct 9290 TAGA-TAAAAAAGTAAAGGATCAAAAACAACTGAACTTATTCCAGTGACAATGACTAAAA 9232 Query 1639 ATGAAGACATTACTAA 1654 |||| || ||||| || Sbjct 9231 ATGAGGATATTACAAA 9216 >seq7517 Length=57173 Score = 78.8 bits (86), Expect = 3e-11 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 3531 ATTGACTTACTAAGAACTGGAGATAGTTGGTATAGTGGAAAATATAAATTTAACTG 3586 ||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 29895 ATTGAAATGCTAAGAACTGGAGATAGTTGGTATAGTGGTAAATACAAATTTAACTG 29840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14672098248885