Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= NC_025825.1 Length=4928 Score E Sequences producing significant alignments: (Bits) Value seq62 95.1 4e-16 >seq62 Length=14134332 Score = 95.1 bits (104), Expect = 4e-16 Identities = 169/247 (68%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 2739 CAAGTAATGACACCTTGGTTTCTAGTGGATAGTAACGCTTGGGGCGTATGGATGAGTCCT 2798 ||| || | || || |||| ||| | || |||| || | ||| || ||||||| ||| Sbjct 3785202 CAAATACTAACGCCATGGTCACTAATAGACTGTAATGCCTAGGGAGTTTGGATGAATCCA 3785261 Query 2799 AAAGACTTTCAACAGATGAAAACACTATGTAGTGAAATTGAGTTGGTTACTTTGGAACAA 2858 |||||||||||| | | |||| ||| ||||| | | || || | || |||||| Sbjct 3785262 GTAGACTTTCAACATTTAACAACAAGATGCAGTGACTTAAACTTAGTATCATTAGAACAA 3785321 Query 2859 GAAATAGACAATGTAACTATAAAAACTGTAACAGAAACCAACCAAGGTAATGCATCTACA 2918 ||| | || || | || ||||||||| ||||||| | || | ||| | Sbjct 3785322 GAACTGTTTAACTTAGCAATTAAAACTGTATCAGAAACAGGACCAGACAGAGCAAAAGTA 3785381 Query 2919 AAGCAATTTAACAATGATTTAACTGCATCTTTACAGGTTGCTTTGGATACTAACAACATA 2978 ||||||| ||| ||||| |||| ||| | | || || ||| ||||||||||| ||| Sbjct 3785382 AAGCAATATAATAATGACCTAACAGCAACAATGCAAGTAGCTGAAGATACTAACAATATA 3785441 Query 2979 TTGCCAT 2985 |||||| Sbjct 3785442 ATGCCAT 3785448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15657273587970