Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= NC_026815.1 Length=4613 Score E Sequences producing significant alignments: (Bits) Value seq46 277 5e-71 seq82 257 5e-65 seq39 251 2e-63 seq410 208 2e-50 seq170 206 8e-50 seq41 183 9e-43 seq217 161 3e-36 seq287 150 5e-33 seq275 129 2e-26 >seq46 Length=16939101 Score = 277 bits (306), Expect = 5e-71 Identities = 268/340 (79%), Gaps = 7/340 (2%) Strand=Plus/Plus Query 1210 ATGCAATGATGTGCTGT-CTAAACAAACAAATGGGCAAA-AGAAACACAATCTTACTTTG 1267 |||| || ||||| ||| |||||||||||| | || ||| ||||| ||||| |||| Sbjct 9976876 ATGCCATAATGTG-TGTGCTAAACAAACAACTAGGAAAACAGAAATACAATTCTACTACA 9976934 Query 1268 TGGTCCAGCAAGTACTGGAAAAAGCCTAATAGCACAAAAAATT----GCTCAATTGGTTG 1323 || |||||||| || ||||||||||||||||| ||||||| | | |||| |||| Sbjct 9976935 AGGACCAGCAAGCACAGGAAAAAGCCTAATAGCTCAAAAAAAAAAAAGGTGAATTAGTTG 9976994 Query 1324 GTAATGTAGGATGCTACAATCCAAGCAATGTTAACTTTCCATTCAACGATTGTAGCAACA 1383 |||||||||| |||||||||||| ||||||||| |||||||| || |||||| |||||| Sbjct 9976995 GTAATGTAGGTTGCTACAATCCATCCAATGTTAATTTTCCATTTAATGATTGTTGCAACA 9977054 Query 1384 AAAACCTAATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAGTAAACCAATTTAAAG 1443 ||||| |||||| ||||||||||||||| |||| || | ||| |||||||| |||| Sbjct 9977055 AAAACGTAATATAGATAGAAGAAGCAGGTGACTTAGGGCAGCTAGTTAACCAATTCAAAG 9977114 Query 1444 CAATCATGAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCAAAGGTAGCAAAACCATCG 1503 | |||||| || ||| || ||| |||| |||||||| || || |||||| | || | Sbjct 9977115 CTATCATGTCAGGACAAAGCATAAGATTAGATCAAAAAGGTAAGGGAAGCAAATCAATTG 9977174 Query 1504 AACCAACTCCAGTTATAATGACAACAAATGAAGACATAAC 1543 |||| || | || ||||||||| ||||||| ||||| || Sbjct 9977175 AACCTACAACTGTCATAATGACATCAAATGAGGACATCAC 9977214 >seq82 Length=11943184 Score = 257 bits (284), Expect = 5e-65 Identities = 301/403 (75%), Gaps = 3/403 (1%) Strand=Plus/Plus Query 1191 AACCCATACAAAGTATTTCATGCAATGATGTGCTGT-CTAAACAAACAAATGGGCAAAAG 1249 |||||| |||||| |||| ||| ||| | ||| || ||||||||| | || || | Sbjct 8422205 AACCCAATAAAAGTAACACATGTAATCATGCG-TGTACTTAACAAACAATTAGGAAAGTG 8422263 Query 1250 AAACACAATCTTACTTTGTGGTCCAGCAAGTACTGGAAAAAGCCTAATAGCACAAAAAAT 1309 ||||| || |||||| || ||||| || || ||||| || |||||||||||||||| Sbjct 8422264 CAACACCATATTACTTCAAGGACCAGCTAGCACAGGAAAGAGTCTAATAGCACAAAAAAA 8422323 Query 1310 TGC-TCAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAATGTTAACTTTCCATTCA 1368 || | | || ||||||||||| || || ||||| ||| ||||| || || ||||||| Sbjct 8422324 TGTGTGAGTTAGTTGGTAATGTGGGCTGTTACAACCCATCTAATGTAAATTTCCCATTCA 8422383 Query 1369 ACGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAG 1428 | ||||| |||||||||| |||||||||||||||| ||||| || | ||| ||| Sbjct 8422384 ATGATTGCTGCAACAAAAATATAATATGGATAGAAGAGGCAGGCAATCTAGGACAATAAG 8422443 Query 1429 TAAACCAATTTAAAGCAATCATGAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCAAAG 1488 |||||||||| |||||||| ||| ||| || ||||||||||||||||| || | Sbjct 8422444 TAAACCAATTCAAAGCAATAATGTCATCTCAAAGTATCAGACTAGACCAAAAAGGAAAGG 8422503 Query 1489 GTAGCAAAACCATCGAACCAACTCCAGTTATAATGACAACAAATGAAGACATAACAAGAG 1548 | ||||| | || ||||| ||||| || | ||||||| ||||||| |||||| || || Sbjct 8422504 GAAGCAAGTCAATAGAACCTACTCCTGTCACAATGACATCAAATGAGGACATACCATTAG 8422563 Query 1549 TTGTGGTAGGGTCTGAACTTAGACCAGAACATAAACAACCAAT 1591 | | | | | |||| | ||||| ||||| | ||||||| Sbjct 8422564 TAAGGATCAGCTGTGAAATAAGACCTGAACACACCAAACCAAT 8422606 >seq39 Length=18005330 Score = 251 bits (278), Expect = 2e-63 Identities = 357/495 (72%), Gaps = 8/495 (2%) Strand=Plus/Plus Query 1190 GAACCCATACAAAGTATTTCATGCAATGATGTGCTGTCTAAACAAACAAATGGGCAAAAG 1249 ||| |||||||||||| | || ||||| | ||| |||||||||||||||| ||||| Sbjct 8062942 GAATCCATACAAAGTAATACAAGCAATAACATGCACATTAAACAAACAAATGGGAAAAAG 8063001 Query 1250 AAACACAATCTTACTTTGTGGTCCAGCAAGTACTGGAAAAAGCCTAATAGCACAAAAAAT 1309 ||| ||||| ||||| ||| ||| ||||||||| ||| |||| |||| ||||| Sbjct 8063002 AAAAACAATGCTACTTCATGGACCAAGAAGTACTGGCAAATCTTTAATCACACAGAAAAT 8063061 Query 1310 TGCTCAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAATGTTAACTTTCCATTCAA 1369 || || ||| |||||| | |||||||||||| ||| | || || |||||||| Sbjct 8063062 ATTCCAGTTACTTGATAATGTTTGTTGCTACAATCCAGTTAATTTAAATTTCCCATTCAA 8063121 Query 1370 CGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGC-AGGAAACTTTGGAACTCAAG 1428 || |||| || ||||| |||||| | |||||||||| || |||| | | | || Sbjct 8063122 TGACTGTACAAATAAAAATATAATATAGGTAGAAGAAGCAAGCTCACTTAGTCAAT-GAG 8063180 Query 1429 TAAACCAATTTAAAGCAATCATGAGTGGCCAAGCAATTAG-ACTAGACCAAAAAGGCAAA 1487 |||| ||||| ||| || || | ||| ||| | | || | | || |||||||| ||| Sbjct 8063181 TAAATCAATTCAAA-CA---ATTAATGGACAATCCGTCAGAAATTGAGCAAAAAGGAAAA 8063236 Query 1488 GGTAGCAAAACCATCGAACCAACTCCAGTTATAATGACAACAAATGAAGACATAACAAGA 1547 || | ||||| || |||||||||||| | ||||||||||| || ||||| || | || | Sbjct 8063237 GGAAACAAAATAATTGAACCAACTCCATTAATAATGACAACTAAAGAAGATATCA-AAAA 8063295 Query 1548 GTTGTGGTAGGGTCTGAACTTAGACCAGAACATAAACAACCAATCATGGACAGATGTATT 1607 ||| | | | |||||| |||| ||||| | | ||||||| | || |||| |||| Sbjct 8063296 GTTAGAATTGACTATGAACTAAGACTTGAACAGATATAACCAATTAAAGATAGATATATT 8063355 Query 1608 CGTGTACATCTGACCACAAGACTTCCTGGCGACTTTGGTTTACTTGATGATGAAGAGATA 1667 | || || |||| | | ||| ||| || |||||| | ||||| |||| || ||| Sbjct 8063356 AATTTATATATGACAAAACCACTGAGTGGAGATTTTGGTCTGATTGATAATGATGAAATA 8063415 Query 1668 CCAACTATTTTTAAA 1682 |||| ||| || ||| Sbjct 8063416 CCAAATATATTCAAA 8063430 >seq410 Length=524141 Score = 208 bits (230), Expect = 2e-50 Identities = 285/389 (73%), Gaps = 17/389 (4%) Strand=Plus/Plus Query 1158 AAAGTATGGAACCTACTTAAAAATAATTCCATGAACCCATACAAAGTATTTCATGCAATG 1217 ||||| ||||| ||| ||||||| || || || |||||||| |||||||| Sbjct 48735 AAAGTGTGGAAACTA------AATAATT--AT-AATCCTTACAAAGTCACGCATGCAATC 48785 Query 1218 ATGTGCTGTCTAAACAAACAAATGGGCAAAAGAAACACAATCTTACTTTGTGGTCCAGCA 1277 |||||||| |||||||| |||||||| || |||||||| ||||||||| |||||||||| Sbjct 48786 ATGTGCTGCCTAAACAA-CAAATGGGTAAGAGAAACACCATCTTACTTAATGGTCCAGCA 48844 Query 1278 AGTACTGGAAAAAGCCTAATAGCACAAAAAATTGCTCAATTGGTTGGTAATGTAGGATGC 1337 || ||||| ||| || |||||||| || | | | || ||| |||||| || ||| Sbjct 48845 AGCACTGGTAAATCTCTCATAGCACAGAAGCTCTGTGACTTAGTTTATAATGTTGGCTGC 48904 Query 1338 TACAATCCAAGCAATGTTAAC-TTTCCATTCAACGATTGTAGCAACAAAAACCTAATATG 1396 | |||||| ||| | || | ||||| ||||| || || | | |||||| | || || Sbjct 48905 T-CAATCC-AGCTAACATATCATTTCCTTTCAATGACTGCATCCGCAAAAATATTATTTG 48962 Query 1397 G--ATAGAAGAAGCAGGAAACTTTGGAACTCAAGTAAACCAATTTAAAGCAATCATGAGT 1454 | |||||| ||||||||| | ||| ||||| || ||||| ||| | ||| Sbjct 48963 GGTTTAGAAG--GCAGGAAACCTAGGACAGCAAGTTAATCAATTCAAACAGCTAATGTTA 49020 Query 1455 GGCCAAGCAATTAGACTAGACCAAAAAGGCAAAGGTAGCAAAACCATCGAACCAACTCCA 1514 || || ||| ||||| |||| |||||||| ||||| ||||||| ||| |||| ||| | Sbjct 49021 GGGCAGGCAGTTAGAATAGATCAAAAAGGGAAAGGAAGCAAAATCATAGAACTAACAGCT 49080 Query 1515 GTTATAATGACAACAAATGAAGACATAAC 1543 || || || || || ||||| ||||||| Sbjct 49081 GTAATCATAACCACCAATGAGAACATAAC 49109 >seq170 Length=7020341 Score = 206 bits (228), Expect = 8e-50 Identities = 292/414 (71%), Gaps = 20/414 (5%) Strand=Plus/Plus Query 1191 AACCCATACAAAGTATTTCATGCAATGATGTGCTGTCTAAACAAACAAATGGGCAAAAGA 1250 |||||| ||||| |||||| || ||||| || ||||| || | ||||| ||| Sbjct 1687163 AACCCAATTAAAGTCACTCATGCTATAATGTGTATGCTGAACAAGCAGCTAGGCAAGAGA 1687222 Query 1251 AACACAATCTTACTTTGTGGTCCAGCAAGTACTGGAAAAAGCCTAATAGCACAAAAAATT 1310 | ||| ||| |||| || ||||| || | || |||||| |||||||||| || || Sbjct 1687223 AGCACCATCCTACTACAAGGACCAGCTAG--CGGGCAAAAGCTTAATAGCACAGAAGATC 1687280 Query 1311 GCTCAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAATGTTAACTTTCCATTCAAC 1370 | | ||||||||||||||||| |||||||||||| ||||| Sbjct 1687281 TGTGAGTTGGTTGGTAATGTAGGTTGCTACAATCCA------------------TTCAAT 1687322 Query 1371 GATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTTTGGAACTCAAGTA 1430 ||||| ||| |||||| |||| || || || || || || ||||| ||| | |||| Sbjct 1687323 GATTGCTACAATAAAAACATAATTTGAATCGAGGAGGCTGGTAACTTAGGACAGCTAGTA 1687382 Query 1431 AACCAATTTAAAGCAATCATGAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCAAAGGT 1490 || ||||| ||||| |||||| || ||| |||||||||||||||||||| ||||| Sbjct 1687383 AATCAATTCAAAGCTATCATGTCAGGACAAAGCATTAGACTAGACCAAAAAGGAAAAGGC 1687442 Query 1491 AGCAAAACCATCGAACCAACTCCAGTTATAATGACAACAAATGAAGACATAACAAGAGTT 1550 |||||| | | ||| ||||||||| ||||||||| | ||||| |||||||| | || Sbjct 1687443 AGCAAATCAGTTGAATGAACTCCAGTCATAATGACATCCAATGAGGACATAACTTGTGTA 1687502 Query 1551 GTGGTAGGGTCTGAACTTAGACCAGAACATAAACAACCAATCATGGACAGATGT 1604 | || | |||| | ||||| || |||| | || || | | | |||||| Sbjct 1687503 AGAATCGGCTGTGAAATAAGACCTGAGCATACTGAGCCTATTAAGCATAGATGT 1687556 >seq41 Length=17853887 Score = 183 bits (202), Expect = 9e-43 Identities = 323/466 (69%), Gaps = 15/466 (3%) Strand=Plus/Plus Query 1208 TCATGCAATGATGTGCTGTCTAAACAAACAAATGGGCAAAAGAAACACAATCTTACTTTG 1267 |||||| | |||||||| ||||||| ||||||||| |||| ||| || |||||||| Sbjct 9096200 TCATGCTGTAATGTGCTGCCTAAACAGACAAATGGGGAAAACAAATACCATCTTACTGAA 9096259 Query 1268 TGGTCCAGCAAGTACTGGAAAAAGCCTAATAGCACAAAAAAT-TGCTCAATTGGTTGGTA 1326 |||||| || | || || | | | ||||||| |||||| ||| || ||||||||| Sbjct 9096260 TGGTCCGGCTGGCACAGGCACATCTTTGATAGCACTAAAAATATGC-CAGCTGGTTGGTA 9096318 Query 1327 ATGTAGGATGCTACAATCCAAGCAATGTTAACTTTCCATTCAACGATTGTA-GCAACAAA 1385 ||| || || ||||| ||| || | |||||||||| ||||||| || ||| Sbjct 9096319 ATGCTGGTTGTTACAACCCAGAAAACATCTCATTTCCATTCAGTGATTGTACCCATAAAA 9096378 Query 1386 AACCTAATATGGATAGAAGAAGCAGGAAACT--TTGGAACTCAAGTAAACCAATTTAAAG 1443 || |||||||| ||||||| || ||||||| | ||| ||||||||||||| ||| Sbjct 9096379 AATATAATATGGGTAGAAGAGGCTGGAAACTTATAGGACAGTAAGTAAACCAATTCAAAC 9096438 Query 1444 CAATCATGAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCAAAGGTAGCAAAACCATCG 1503 | | ||| || ||| | ||| ||||||||||| |||| ||||| || Sbjct 9096439 AATTAATGTCAGGACAAATCGTGAGAACTGACCAAAAAGGAAAAGACTTAAAAACTATTA 9096498 Query 1504 AACCAACTCCAGTTATAATGACAACAAATGAAGACATAACAAGAGTTGTGGTAGGGTCTG 1563 | ||||||||||| || |||||||| |||||| | || || ||| || || | || Sbjct 9096499 AGCCAACTCCAGTAATCATGACAACTAATGAAAATATTACTGAAGTCAGAGTTGGTTGTG 9096558 Query 1564 AACTTAGACCAGAACATAAACAACCAATCATGGACAGATGTATTCGTGTACATCTGACCA 1623 |||| ||| | | | ||||| | | ||||||| ||| | || | || | || Sbjct 9096559 AACT--------AAC--ACAGAGCCAATAAAGCACAGATGCATTAATCTAAAACTAAGCA 9096608 Query 1624 CAAGACTTCCTGGCGACTTTGGTTTACTTGATGATGAAGAGATACC 1669 | ||| ||| | |||||| | |||||||||| || || || Sbjct 9096609 AAGTACTAGATGGAAAATTTGGTCTCATTGATGATGATGAAATCCC 9096654 >seq217 Length=4971029 Score = 161 bits (178), Expect = 3e-36 Identities = 191/255 (75%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 1356 AACTTTCCATTCAACGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAAC 1415 ||||||||||| || || || |||| |||||| | | |||| |||||||| |||||||| Sbjct 886294 AACTTTCCATTTAATGACTGCTGCAATAAAAACATCAAATGGGTAGAAGAACCAGGAAAC 886235 Query 1416 TTTGGAACTCAAGTAAACCAATTTAAAGCAATCATG--AGTGGCCAAGCAATTAGACTAG 1473 || ||| ||||||||||||||||||||||||||| || ||| |||| || |||| || Sbjct 886234 TTAGGACACCAAGTAAACCAATTTAAAGCAATCATGTCAG-GGCAAAGC-ATAAGACCAG 886177 Query 1474 ACCAAAAAGGCAAAGGTAGCAAAACCATCGAACCAACTCCAGTTATAATGACAACAAATG 1533 | || ||||| || || |||||| ||| ||| ||| ||||| || |||||| | | || Sbjct 886176 ATCAGAAAGGAAAGGGAAGCAAACAAATCAAACTAACACCAGTGATCATGACATCCAGTG 886117 Query 1534 AAGACATAACAAGAGTTGTGGTAGGGTCTGAACTTAGACCAGAACATAAACAACCAATCA 1593 || |||| || | || | || | |||||| | ||| ||||| | | | ||||| | Sbjct 886116 AATACATTACTAATGTGAGAATTGGCTGTGAACTAAAACCTGAACACAGAGAGCCAATAA 886057 Query 1594 TGGACAGATGTATTC 1608 | |||| | |||| Sbjct 886056 AGCACAGGCGCATTC 886042 >seq287 Length=2826446 Score = 150 bits (166), Expect = 5e-33 Identities = 288/421 (68%), Gaps = 20/421 (5%) Strand=Plus/Plus Query 1190 GAACCCATACAAAGTATTTCATGCAATG--ATGTGCTGTCTAAACAAACAAATGGGCAAA 1247 ||| || || |||||| | |||||| || |||| | || || ||| || ||| Sbjct 2405202 GAATCCTTATAAAGTAACACCTGCAATTTTATATGCTTT--AAGTAAGCAAGTGAAGAAA 2405259 Query 1248 AGAAACACAATCTTACTT--TGTGGTCCAGCAAGTACTGGAAAAAGCCTAATAGCACAAA 1305 ||||| || |||||||| | ||| ||| |||| |||||| || | |||| || Sbjct 2405260 AGAAAAACCATCTTACTACATATGGAATAGCCAGTAAAGGAAAATCACTGACAGCATGAA 2405319 Query 1306 AAATTGCTCAATTGGTTGGTAATGTAGGATGCTACAATCCAAGCAATGTTAACTTTCCAT 1365 |||| ||| ||||||||||| | | || | ||||||| ||| | || || |||| Sbjct 2405320 AAATG--TCAGTTGGTTGGTAACATTGTATACAGCAATCCAGCTAATATGAATTTCCCAT 2405377 Query 1366 TCAACGATTGTAGCAACAAAAACCTAATATGGATAGAAGAAGCAGGAAACTTTGGAACTC 1425 ||| || |||| ||||||||| ||||||| || |||||| ||| |||||| Sbjct 2405378 TCAGTGACTGTACTAACAAAAACATAATATGTATTAGAGAAGCCAGAAGTTTTGGACAAT 2405437 Query 1426 AAGTAAACCAATTTAAAGCAATCATGAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCA 1485 | ||||||||||| ||| ||| ||||||| ||| | | ||| | |||||||||| | Sbjct 2405438 ACGTAAACCAATTCAAACAAATTTTGAGTGGTCAAAAAGTAAGAATTGACCAAAAAGATA 2405497 Query 1486 AAGGTAGCAAAACCATCGAACCAACTCCAGTTATAATGACAACAAATGAAGACATAACAA 1545 |||| | |||||| || ||||||||| || || | ||| | || ||||| | || Sbjct 2405498 AAGGAAACAAAACAATGGAACCAACTTTCGTAATGAGGAC-ATAACTGAAGGAAAAA--- 2405553 Query 1546 GAGTTGTGGTAGGGTCTGAACTTAGACCAGAACATAAACAACCAATCATGGACAGATGTA 1605 |||| | |||| | | |||||||| | ||||||| | |||||||| | Sbjct 2405554 --------ATAGGTTGTGAATTGAATCCAGAACACATTCAACCAACGAAAGACAGATGCA 2405605 Query 1606 T 1606 | Sbjct 2405606 T 2405606 >seq275 Length=3308571 Score = 129 bits (142), Expect = 2e-26 Identities = 223/316 (71%), Gaps = 6/316 (2%) Strand=Plus/Plus Query 1371 GATTGTAGCAACAAAAACC-TAATATGGATAGAAGAAGCAGGAA-ACTTTGGAACTCAAG 1428 || |||| ||| ||||| | | |||||| ||||||||||| | ||| | | |||| Sbjct 3102936 GACTGTACCAATAAAAAACATTATATGGGTAGAAGAAGCAAGCTCACTAAGTCAG-CAAG 3102994 Query 1429 TAAACCAATTTAAAGCAA-TCATGAGTGGCCAAGCAATTAGACTAGACCAAAAAGGCAAA 1487 || |||||| || |||| | | |||||| ||| | | ||| | || || ||||| || Sbjct 3102995 GAAGCCAATTCAA-GCAACTAACGAGTGGACAATTAGTGAGAATTGATCAGAAAGGAAAG 3103053 Query 1488 GGTAGCAAAACCATCGAACCAACTCCAGTTATAATGACAACAAATGAAGACATAACAAGA 1547 || |||||||| | |||||||| ||| | ||||||| ||| ||| |||||||||||| | Sbjct 3103054 GGAAGCAAAACAACAGAACCAACACCACTAATAATGATAACTAATAAAGACATAACAAAA 3103113 Query 1548 GTTGTGGTAGGGTCTGAACTTAGACCAGAACATAAACAACCAAT-CATGGACAGATGTAT 1606 || || | |||| | |||||||| || | | ||||||| | | |||||| || Sbjct 3103114 GTAAGAACTGGCTGTGAATTAAGACCAGAGCACACATAACCAATAAAAGTTCAGATGCAT 3103173 Query 1607 TCGTGTACATCTGACCACAAGACTTCCTGGCGACTTTGGTTTACTTGATGATGAAGAGAT 1666 || | |||| | | ||| | ||||||| ||| |||||||||| || || Sbjct 3103174 AAACTTATTTATGACAAAACAACTAGGAAGAGACTTTGAATTAATTGATGATGATGAAAT 3103233 Query 1667 ACCAACTATTTTTAAA 1682 | ||| |||||| ||| Sbjct 3103234 AACAAATATTTTCAAA 3103249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14649294601620