Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= NC_029797.1 Length=4765 Score E Sequences producing significant alignments: (Bits) Value seq82 262 1e-66 seq39 257 5e-65 seq170 246 9e-62 seq46 239 1e-59 seq41 235 2e-58 seq410 194 5e-46 seq217 187 8e-44 seq275 145 2e-31 seq287 122 3e-24 >seq82 Length=11943184 Score = 262 bits (290), Expect = 1e-66 Identities = 375/521 (72%), Gaps = 9/521 (2%) Strand=Plus/Plus Query 1165 AAAGTATTCCATGCAATCATGTGCTGT-CTCAACAAACAAATGGGCAAAAGAAACACCAT 1223 |||||| |||| ||||||| | ||| || ||||||||| | || || | |||||||| Sbjct 8422214 AAAGTAACACATGTAATCATGCG-TGTACTTAACAAACAATTAGGAAAGTGCAACACCAT 8422272 Query 1224 TCTACTGTGTGGGCCTGCAAGCACTGGCAAAAGCCTAATAGCACAAAAAA-TATGCCAAC 1282 |||| || || || ||||| || || || |||||||||||||||| | || | Sbjct 8422273 ATTACTTCAAGGACCAGCTAGCACAGGAAAGAGTCTAATAGCACAAAAAAATGTGTGAGT 8422332 Query 1283 TGGTTGGTAATGTTGGTTGCTACAATGCCTCAAATGTAAACTTTCCTTTCAATGACTGCA 1342 | ||||||||||| || || ||||| | || |||||||| || || |||||||| ||| Sbjct 8422333 TAGTTGGTAATGTGGGCTGTTACAACCCATCTAATGTAAATTTCCCATTCAATGATTGCT 8422392 Query 1343 GCAACAAAAATATAATCTGGGTAGAAGAAGCTGGCAACTTTGGAGGCCAAGTAAACCAAT 1402 |||||||||||||||| ||| ||||||| || ||||| | ||| |||||||||||| Sbjct 8422393 GCAACAAAAATATAATATGGATAGAAGAGGCAGGCAATCTAGGACAATAAGTAAACCAAT 8422452 Query 1403 TCAAAACAATCATGAGTGGCCAATCAATCAGACTTGACCAAAAAGGAAAAGGCAGTAAAG 1462 ||||| |||| ||| ||| |||||||| |||||||||||||| || || || Sbjct 8422453 TCAAAGCAATAATGTCATCTCAAAGTATCAGACTAGACCAAAAAGGAAAGGGAAGCAAGT 8422512 Query 1463 AAATCCAACCAACTCCAGTCATAATGACTACAAATGAAGACATAACCAAAGTAATGATAG 1522 ||| |||| ||||| |||| |||||| ||||||| |||||| | ||||| ||| Sbjct 8422513 CAATAGAACCTACTCCTGTCACAATGACATCAAATGAGGACATACCATTAGTAAGGATCA 8422572 Query 1523 GATGTGAACTCAAACCAGAACACAAACAACCTATAATGGACAGATGTGTAAGAATAGAAC 1582 | |||||| | | ||| ||||||| |||| || | | | | ||| | ||| | Sbjct 8422573 GCTGTGAAATAAGACCTGAACACACCAAACCAATTAAGCATCATTATGTCAATATAAGGC 8422632 Query 1583 TCaaaaaaaGACTACAAGGTGACTTTGGTTTGCTTGAAGATGGTGAAATCCCAGACATAT 1642 ||| ||||| || | |||| ||||| | | || | |||||| ||| |||| | Sbjct 8422633 TCACAAAAACTTTAGATGGTGGGTTTGGAATAATCGACAACCATGAAATACCAAACATCT 8422692 Query 1643 TCAAATGGTTAATT-AAG--AAAGGATATGAACCAACAATG 1680 |||| | | || ||| ||||||||| | ||||| ||| Sbjct 8422693 TCAA---GACACTTGAAGATAAAGGATATTATCCAACTATG 8422730 >seq39 Length=18005330 Score = 257 bits (284), Expect = 5e-65 Identities = 416/586 (71%), Gaps = 22/586 (4%) Strand=Plus/Plus Query 1155 GAATCCATACAAAGTATTCCATGCAATCATGTGCTGTCTCAACAAACAAATGGGCAAAAG 1214 |||||||||||||||| | || ||||| | ||| | |||||||||||||| ||||| Sbjct 8062942 GAATCCATACAAAGTAATACAAGCAATAACATGCACATTAAACAAACAAATGGGAAAAAG 8063001 Query 1215 AAACACCATTCTACTGTGTGGGCCTGCAAGCACTGGCAAAAGCCTAATAGCACAAAAAAT 1274 ||| || || ||||| ||| || ||| ||||||||| |||| |||| ||||| Sbjct 8063002 AAAAACAATGCTACTTCATGGACCAAGAAGTACTGGCAAATCTTTAATCACACAGAAAAT 8063061 Query 1275 ATGCCAACTGGTTGGTAATGTTGGTTGCTACAATGCCTCAAATGTAAACTTTCCTTTCAA 1334 || ||| | ||| ||||||| ||||||||||| | ||| |||| || || ||||| Sbjct 8063062 ATTCCAGTTACTTGATAATGTTTGTTGCTACAATCCAGTTAATTTAAATTTCCCATTCAA 8063121 Query 1335 TGACTGCAGCAACAAAAATATAATCTGGGTAGAAGAAGCTGGC-AACTTTGGAGGCCA-- 1391 |||||| | || ||||||||||| | |||||||||||| || |||| || | | Sbjct 8063122 TGACTGTACAAATAAAAATATAATATAGGTAGAAGAAGCAAGCTCACTT---AGTCAATG 8063178 Query 1392 AGTAAACCAATTCAAAACAATCATGAGTGGCCAATCAATCAG-ACTTGACCAAAAAGGAA 1450 |||||| |||||| ||||| || | ||| ||||| |||| | |||| |||||||||| Sbjct 8063179 AGTAAATCAATTC-AAACA---ATTAATGGACAATCCGTCAGAAATTGAGCAAAAAGGAA 8063234 Query 1451 AAGGCAGTAAAGAAATCCAACCAACTCCAGTCATAATGACTACAAATGAAGACATAACCA 1510 |||| | ||| ||| ||||||||||| | |||||||| || || ||||| || | | Sbjct 8063235 AAGGAAACAAAATAATTGAACCAACTCCATTAATAATGACAACTAAAGAAGATATCA-AA 8063293 Query 1511 AAGTAATGATAGGATGTGAACTCAAACCAGAACACAAACAACCTATAATGGACAGATGTG 1570 |||| | || | | |||||| | || ||||| | | |||| || | || |||| | Sbjct 8063294 AAGTTAGAATTGACTATGAACTAAGACTTGAACAGATATAACCAATTAAAGATAGATATA 8063353 Query 1571 TAAGAATAGAACTCaaaaaaaGACTACAAGGTGACTTTGGTTTGCTTGAAGATGGTGAAA 1630 | | || | | | |||| ||| || || |||||| || |||| ||| ||||| Sbjct 8063354 TTAATTTATATATGACAAAACCACTGAGTGGAGATTTTGGTCTGATTGATAATGATGAAA 8063413 Query 1631 TCCCAGACATATTCAAATGGTTAATTAAGAAAGGATA----TGAACCAACAATGCAAAGT 1686 | ||| | ||||||||| || || || ||| ||| |||| ||| ||| ||| Sbjct 8063414 TACCAAATATATTCAAA---TTCATGAA-AAAACATAATCTTGAATGAACCATGAAAAAC 8063469 Query 1687 TACTGTGAAAAATGGGGAGCCACTCCCA-CATGGGGTGAAAACTGG 1731 ||| || | |||||||| | | || ||||| ||||||||| Sbjct 8063470 TACACAGAGACATGGGGAG-GAGTGTCAGAATGGGAAGAAAACTGG 8063514 >seq170 Length=7020341 Score = 246 bits (272), Expect = 9e-62 Identities = 362/516 (70%), Gaps = 20/516 (4%) Strand=Plus/Plus Query 1132 AAACTAATCAAAGACAACAACATGAATCCATACAAAGTATTCCATGCAATCATGTGCTGT 1191 ||| || ||||| |||||| || ||| ||||| ||||| || ||||| Sbjct 1687139 AAAATATTCAAACTAAACAACTACAACCCAATTAAAGTCACTCATGCTATAATGTGTATG 1687198 Query 1192 CTCAACAAACAAATGGGCAAAAGAAACACCATTCTACTGTGTGGGCCTGCAAGCACTGGC 1251 || ||||| || | ||||| |||| |||||| ||||| || || || ||| ||| Sbjct 1687199 CTGAACAAGCAGCTAGGCAAGAGAAGCACCATCCTACTACAAGGACCAGCTAGCG--GGC 1687256 Query 1252 AAAAGCCTAATAGCACAAAAAATATGCCAACTGGTTGGTAATGTTGGTTGCTACAATGCC 1311 |||||| |||||||||| || || || | ||||||||||||| |||||||||||| Sbjct 1687257 AAAAGCTTAATAGCACAGAAGATCTGTGAGTTGGTTGGTAATGTAGGTTGCTACAAT--- 1687313 Query 1312 TCAAATGTAAACTTTCCTTTCAATGACTGCAGCAACAAAAATATAATCTGGGTAGAAGAA 1371 || |||||||| ||| ||| ||||| ||||| || | || || Sbjct 1687314 ---------------CCATTCAATGATTGCTACAATAAAAACATAATTTGAATCGAGGAG 1687358 Query 1372 GCTGGCAACTTTGGAGGCCAAGTAAACCAATTCAAAACAATCATGAGTGGCCAATCAATC 1431 ||||| ||||| ||| | |||||| ||||||||| | |||||| || ||| || Sbjct 1687359 GCTGGTAACTTAGGACAGCTAGTAAATCAATTCAAAGCTATCATGTCAGGACAAAGCATT 1687418 Query 1432 AGACTTGACCAAAAAGGAAAAGGCAGTAAAGAAATCCAACCAACTCCAGTCATAATGACT 1491 ||||| |||||||||||||||||||| ||| | | || |||||||||||||||||| Sbjct 1687419 AGACTAGACCAAAAAGGAAAAGGCAGCAAATCAGTTGAATGAACTCCAGTCATAATGACA 1687478 Query 1492 ACAAATGAAGACATAACCAAAGTAATGATAGGATGTGAACTCAAACCAGAACACAAACAA 1551 | ||||| |||||||| |||| || || |||||| | | ||| || || | | Sbjct 1687479 TCCAATGAGGACATAACTTGTGTAAGAATCGGCTGTGAAATAAGACCTGAGCATACTGAG 1687538 Query 1552 CCTATAATGGACAGATGTGTAAGAATAGAACTCaaaaaaaGACTACAAGGTGACTTTGGT 1611 ||||| | | | |||||||| | || |||||| ||||| ||| | ||| || ||| Sbjct 1687539 CCTATTAAGCATAGATGTGTCAACATCAAACTCACAAAAACTCTAGATGGTTGATTCGGT 1687598 Query 1612 TTGCTTGAAGATGGTGAAATCCCAGACATATTCAAA 1647 ||||| ||| |||||| ||| |||| |||||| Sbjct 1687599 ATGCTTAGAGACCATGAAATACCAAACATTTTCAAA 1687634 >seq46 Length=16939101 Score = 239 bits (264), Expect = 1e-59 Identities = 358/501 (71%), Gaps = 18/501 (4%) Strand=Plus/Plus Query 1128 ATGGAAACTAATCAAAGACAA--CAACATG-AATCCATACAAAGTATTCCATGCAATCAT 1184 ||||| | ||||| || | || ||| ||| |||||| | ||| |||| || || Sbjct 9976834 ATGGATA-TAATCCAATAAAATCCAAAATGTAATCCAAAAAAA-------ATGCCATAAT 9976885 Query 1185 GTGCTGT-CTCAACAAACAAATGGGCAAA-AGAAACACCATTCTACTGTGTGGGCCTGCA 1242 ||| ||| || ||||||||| | || ||| ||||| || |||||||| || || ||| Sbjct 9976886 GTG-TGTGCTAAACAAACAACTAGGAAAACAGAAATACAATTCTACTACAAGGACCAGCA 9976944 Query 1243 AGCACTGGCAAAAGCCTAATAGCACAAAAAATAT----GCCAACTGGTTGGTAATGTTGG 1298 ||||| || |||||||||||||| ||||||| | | || | ||||||||||| || Sbjct 9976945 AGCACAGGAAAAAGCCTAATAGCTCAAAAAAAAAAAAGGTGAATTAGTTGGTAATGTAGG 9977004 Query 1299 TTGCTACAATGCCTCAAATGTAAACTTTCCTTTCAATGACTGCAGCAACAAAAATATAAT 1358 |||||||||| | || ||||| || ||||| || ||||| || |||||||||| |||| Sbjct 9977005 TTGCTACAATCCATCCAATGTTAATTTTCCATTTAATGATTGTTGCAACAAAAACGTAAT 9977064 Query 1359 CTGGGTAGAAGAAGCTGGCAACTTTGGAGGCCAAGTAAACCAATTCAAAACAATCATGAG 1418 | | |||||||||| || |||| || | ||| |||||||||||| | |||||| Sbjct 9977065 ATAGATAGAAGAAGCAGGTGACTTAGGGCAGCTAGTTAACCAATTCAAAGCTATCATGTC 9977124 Query 1419 TGGCCAATCAATCAGACTTGACCAAAAAGGAAAAGGCAGTAAAGAAATCCAACCAACTCC 1478 || ||| || ||| | || |||||||| || || || ||| ||| |||| || | Sbjct 9977125 AGGACAAAGCATAAGATTAGATCAAAAAGGTAAGGGAAGCAAATCAATTGAACCTACAAC 9977184 Query 1479 AGTCATAATGACTACAAATGAAGACATAACCAAAGTAATGATAGGATGTGAACTCAAACC 1538 ||||||||||| ||||||| ||||| || ||||| || |||||||| | | ||| Sbjct 9977185 TGTCATAATGACATCAAATGAGGACATCACTGTAGTAAGAATCAGATGTGAAATAAGACC 9977244 Query 1539 AGAACACAAACAACCTATAATGGACAGATGTGTAAGAATAGAACTCaaaaaaaGACTACA 1598 |||| || |||| || | || ||||| | ||| | || | ||||| | | Sbjct 9977245 TGAACCCACCAAACCAATTAAACACCATTGTGTCAATATAAAGCTTACAAAAACTTTGGA 9977304 Query 1599 AGGTGACTTTGGTTTGCTTGA 1619 |||| |||||| || |||| Sbjct 9977305 TGGTGGGTTTGGTGTGATTGA 9977325 >seq41 Length=17853887 Score = 235 bits (260), Expect = 2e-58 Identities = 344/484 (71%), Gaps = 13/484 (3%) Strand=Plus/Plus Query 1174 CATGCAATCATGTGCTGTCTCAACAAACAAATGGGCAAAAGAAACACCATTCTACTGTGT 1233 ||||| | |||||||| || |||| ||||||||| |||| ||| ||||| ||||| | Sbjct 9096201 CATGCTGTAATGTGCTGCCTAAACAGACAAATGGGGAAAACAAATACCATCTTACTGAAT 9096260 Query 1234 GGGCCTGCAAGCACTGGCAAAAGCCTAATAGCACAAAAAATATGCCAACTGGTTGGTAAT 1293 || || || |||| |||| | | ||||||| |||||||||||| |||||||||||| Sbjct 9096261 GGTCCGGCTGGCACAGGCACATCTTTGATAGCACTAAAAATATGCCAGCTGGTTGGTAAT 9096320 Query 1294 GTTGGTTGCTACAATGCCTCAAATGTAAACTTTCCTTTCAATGACTGCA-GCAACAAAAA 1352 | |||||| ||||| | ||| | ||||| |||| ||| || | || ||||| Sbjct 9096321 GCTGGTTGTTACAACCCAGAAAACATCTCATTTCCATTCAGTGATTGTACCCATAAAAAA 9096380 Query 1353 TATAATCTGGGTAGAAGAAGCTGGCAACT--TTGGAGGCCAAGTAAACCAATTCAAAACA 1410 |||||| ||||||||||| ||||| |||| | ||| ||||||||||||||||| | Sbjct 9096381 TATAATATGGGTAGAAGAGGCTGGAAACTTATAGGACAGTAAGTAAACCAATTCAAACAA 9096440 Query 1411 ATCATGAGTGGCCAATCAATCAGACTTGACCAAAAAGGAAAAGGCAGTAAAGAAATCCAA 1470 | ||| || ||| | ||| ||||||||||||||||| | ||| || | Sbjct 9096441 TTAATGTCAGGACAAATCGTGAGAACTGACCAAAAAGGAAAAGACTTAAAAACTATTAAG 9096500 Query 1471 CCAACTCCAGTCATAATGACTACAAATGAAGACATAACCAAAGTAATGATAGGATGTGAA 1530 ||||||||||| || ||||| || |||||| | || || |||| | | || |||||| Sbjct 9096501 CCAACTCCAGTAATCATGACAACTAATGAAAATATTACTGAAGTCAGAGTTGGTTGTGAA 9096560 Query 1531 CTCAAACCAGAACACAAACAACCTATAATGGACAGATGTGTAAGAATAGAACTCaaaaaa 1590 || ||||| | | || |||| | ||||||| | | || |||| | ||| Sbjct 9096561 CT--------AACAC--AGAGCCAATAAAGCACAGATGCATTAATCTAAAACTAAGCAAA 9096610 Query 1591 aGACTACAAGGTGACTTTGGTTTGCTTGAAGATGGTGAAATCCCAGACATATTCAAATGG 1650 |||| | || | |||||| | |||| |||| ||||||||| ||| |||||| | Sbjct 9096611 GTACTAGATGGAAAATTTGGTCTCATTGATGATGATGAAATCCCTAACAGATTCAAGTCA 9096670 Query 1651 TTAA 1654 |||| Sbjct 9096671 TTAA 9096674 >seq410 Length=524141 Score = 194 bits (214), Expect = 5e-46 Identities = 347/495 (70%), Gaps = 15/495 (3%) Strand=Plus/Plus Query 1156 AATCCATACAAAGTATTCCATGCAATCATGTGCTGTCTCAACAAACAAATGGGCAAAAGA 1215 ||||| |||||||| ||||||||||||||||| || ||||| |||||||| || ||| Sbjct 48759 AATCCTTACAAAGTCACGCATGCAATCATGTGCTGCCTAAACAA-CAAATGGGTAAGAGA 48817 Query 1216 AACACCATTCTACTGTGTGGGCCTGCAAGCACTGGCAAAAGCCTAATAGCACAAAAAATA 1275 |||||||| |||| ||| || ||||||||||| ||| || |||||||| || | Sbjct 48818 AACACCATCTTACTTAATGGTCCAGCAAGCACTGGTAAATCTCTCATAGCACAGAAGCTC 48877 Query 1276 TGCCAACTGGTTGGTAATGTTGGTTGCTACAATGCCTCAAATGTAAACTTTCCTTTCAAT 1335 || | | ||| ||||||||| |||| |||| | | || || |||||||||||| Sbjct 48878 TGTGACTTAGTTTATAATGTTGGCTGCT-CAATCCAGCTAACATATCATTTCCTTTCAAT 48936 Query 1336 GACTGCAGCAACAAAAATATAATCTGGG--TAGAAGAAGCTGGCAACTTTGGAGGCCAAG 1393 ||||||| | ||||||||| || |||| |||||| || || ||| | ||| |||| Sbjct 48937 GACTGCATCCGCAAAAATATTATTTGGGTTTAGAAG--GCAGGAAACCTAGGACAGCAAG 48994 Query 1394 TAAACCAATTCAAAACAATCATGAGTGGCCAATCAATCAGACTTGACCAAAAAGGAAAAG 1453 | || ||||||||| | ||| || || || | ||| | || |||||||| |||| Sbjct 48995 TTAATCAATTCAAACAGCTAATGTTAGGGCAGGCAGTTAGAATAGATCAAAAAGGGAAAG 49054 Query 1454 GCAGTAAAGAAATCCAACCAACTCCAGTCATAATGACTACAAATGAAGACATAACCAAAG 1513 | || ||| || ||| ||| | || || || || || ||||| ||||||| | | Sbjct 49055 GAAGCAAAATCATAGAACTAACAGCTGTAATCATAACCACCAATGAGAACATAACTGAGG 49114 Query 1514 TAATGATAGGATGTGAACTCAAACCAGAACACAAACAACCTATAATGGACAGATGTGT-A 1572 | | | || |||| | | | ||| |||| | | | || | | | |||| | | Sbjct 49115 TCAGAACTGGCTGTGTATTAAGACCTAAACATACTGAGACAATTAAGCATGGATGCCTGA 49174 Query 1573 AGAATAGAACTCaaaaaaaGACTACAAGGTGACTTTGGTTTGCTTGAAGATGGTGAAATC 1632 | | ||| |||| |||| || || || ||||||||| ||||||| ||| ||| Sbjct 49175 ATATTAG-ACTC----AAAGCCT-TTAGATG-GTTTGGTTTGATTGAAGACAGTG-AATA 49226 Query 1633 CCAGACATATTCAAA 1647 ||| |||| |||||| Sbjct 49227 CCAAACATCTTCAAA 49241 >seq217 Length=4971029 Score = 187 bits (206), Expect = 8e-44 Identities = 278/402 (69%), Gaps = 27/402 (7%) Strand=Plus/Minus Query 1164 CAAAGTATTCCATGCAATCATGTGCTGTCTCAACAAACAAATGGGCAAAAGAAACACCAT 1223 ||||||| |||||||| || |||| || ||||| ||| | | |||||||| ||||| Sbjct 886424 CAAAGTAACATATGCAATCTTGGGCTGCCTAAACAAGCAACTAAGAAAAAGAAATACCAT 886365 Query 1224 TCTACTGTGTGGGCCTGCAAGCACTGGCAAAAGCCTAATAGCACAAAAAATATGCCAACT 1283 ||||| || | |||| |||||| ||||| || |||| || || || | Sbjct 886364 CCTACTAGAAGGAGCAATGAGCATGGGCAAATCACTAATGGCTCAAATGATTTGTCAGTT 886305 Query 1284 GGTTGGTAATGTTGGTTGCTACAATGCCTCAAATGTAAACTTTCCTTTCAATGACTGCAG 1343 ||||||| |||||||||| || ||||||||| | Sbjct 886304 AGTTGGTA---------------------------TAAACTTTCCATTTAATGACTGCTG 886272 Query 1344 CAACAAAAATATAATCTGGGTAGAAGAAGCTGGCAACTTTGGAGGCCAAGTAAACCAATT 1403 ||| ||||| || | |||||||||||| | || ||||| ||| ||||||||||||||| Sbjct 886271 CAATAAAAACATCAAATGGGTAGAAGAACCAGGAAACTTAGGACACCAAGTAAACCAATT 886212 Query 1404 CAAAACAATCATGAGTGGCCAATCAATCAGACTTGACCAAAAAGGAAAAGGCAGTAAAGA 1463 ||| |||||||| || ||| || |||| || || |||||||| || || ||| | Sbjct 886211 TAAAGCAATCATGTCAGGGCAAAGCATAAGACCAGATCAGAAAGGAAAGGGAAGCAAACA 886152 Query 1464 AATCCAACCAACTCCAGTCATAATGACTACAAATGAAGACATAACCAAAGTAATGATAGG 1523 |||| ||| ||| ||||| || ||||| | | |||| |||| || || || | || || Sbjct 886151 AATCAAACTAACACCAGTGATCATGACATCCAGTGAATACATTACTAATGTGAGAATTGG 886092 Query 1524 ATGTGAACTCAAACCAGAACACAAACAACCTATAATGGACAG 1565 |||||||| ||||| ||||||| | | || |||| | |||| Sbjct 886091 CTGTGAACTAAAACCTGAACACAGAGAGCCAATAAAGCACAG 886050 >seq275 Length=3308571 Score = 145 bits (160), Expect = 2e-31 Identities = 262/375 (70%), Gaps = 6/375 (2%) Strand=Plus/Plus Query 1334 ATGACTGCAGCAACAAAAAT-ATAATCTGGGTAGAAGAAGCTGGC-AACTTTGGAGGCCA 1391 ||||||| | ||| ||||| || || |||||||||||||| || ||| | | || Sbjct 3102934 ATGACTGTACCAATAAAAAACATTATATGGGTAGAAGAAGCAAGCTCACTAAGTCAG-CA 3102992 Query 1392 AGTAAACCAATTCAAAACAATCATGAGTGGCCAATCAATCAGACTTGACCAAAAAGGAAA 1451 || || ||||||||| | | | |||||| |||| | | ||| |||| || |||||||| Sbjct 3102993 AGGAAGCCAATTCAAGCAACTAACGAGTGGACAATTAGTGAGAATTGATCAGAAAGGAAA 3103052 Query 1452 AGGCAGTAAAGAAATCCAACCAACTCCAGTCATAATGACTACAAATGAAGACATAACCAA 1511 || || ||| || ||||||| ||| | ||||||| || ||| |||||||||| || Sbjct 3103053 GGGAAGCAAAACAACAGAACCAACACCACTAATAATGATAACTAATAAAGACATAACAAA 3103112 Query 1512 AGTAATGATAGGATGTGAACTCAAACCAGAACACAAACAACCTAT-AATGGACAGATGTG 1570 ||||| | || |||||| | | |||||| |||| | |||| || || | |||||| Sbjct 3103113 AGTAAGAACTGGCTGTGAATTAAGACCAGAGCACACATAACCAATAAAAGTTCAGATGCA 3103172 Query 1571 TAAGAATAGAACTCaaaaaaaGACTACAAGGTGACTTTGGTTTGCTTGAAGATGGTGAAA 1630 ||| || | | |||| |||| | | ||||||| || |||| |||| ||||| Sbjct 3103173 TAAACTTATTTATGACAAAACAACTAGGAAGAGACTTTGAATTAATTGATGATGATGAAA 3103232 Query 1631 TCCCAGACATATTCAAA-TGGTTAATTAAGAAAGGATATGAACCAACAATGCAAAGTTAC 1689 | || | || |||||| | | | | | | | || |||||||| ||| |||| ||| Sbjct 3103233 TAACAAATATTTTCAAATTCATGACATCACACAACCTA-GAACCAACCATGAAAAGCTAC 3103291 Query 1690 TGTGAAAAATGGGGA 1704 |||| |||||| Sbjct 3103292 ATAGAAACTTGGGGA 3103306 >seq287 Length=2826446 Score = 122 bits (134), Expect = 3e-24 Identities = 280/419 (67%), Gaps = 22/419 (5%) Strand=Plus/Plus Query 1155 GAATCCATACAAAGTATTCCATGCAATC--ATGTGCTGTCTCAACAAACAAATGGGCAAA 1212 |||||| || |||||| | |||||| || |||| | | || ||| || ||| Sbjct 2405202 GAATCCTTATAAAGTAACACCTGCAATTTTATATGCTTTA--AGTAAGCAAGTGAAGAAA 2405259 Query 1213 AGAAACACCATTCTACTG--TGTGGGCCTGCAAGCACTGGCAAAAGCCTAATAGCACAAA 1270 ||||| ||||| |||| | ||| || || | || ||| || | |||| || Sbjct 2405260 AGAAAAACCATCTTACTACATATGGAATAGCCAGTAAAGGAAAATCACTGACAGCATGAA 2405319 Query 1271 AAATATGCCAACTGGTTGGTAATGTTGGTTGCTACAATGCCTCAAATGTAAACTTTCCTT 1330 |||| | || |||||||||| ||| | | |||| | | ||| | || || || | Sbjct 2405320 AAATGT--CAGTTGGTTGGTAACATTGTATACAGCAATCCAGCTAATATGAATTTCCCAT 2405377 Query 1331 TCAATGACTGCAGCAACAAAAATATAATCTGGGTAGAAGAAGCTGGCAACTTTGGAGGCC 1390 ||| |||||| | |||||||| ||||| || | |||||| | | |||||| Sbjct 2405378 TCAGTGACTGTACTAACAAAAACATAATATGTATTAGAGAAGCCAGAAGTTTTGGACAAT 2405437 Query 1391 AAGTAAACCAATTCAAAACAATCATGAGTGGCCAATCAATCAGACTTGACCAAAAAGGAA 1450 | ||||||||||||||| ||| ||||||| ||| | | ||| |||||||||||| | Sbjct 2405438 ACGTAAACCAATTCAAACAAATTTTGAGTGGTCAAAAAGTAAGAATTGACCAAAAAGATA 2405497 Query 1451 AAGGCAGTAAAGAAATCCAACCAACTCCAGTCATAATGACTACAAATGAAGACATAAC-C 1509 |||| | ||| ||| |||||||| || ||||| |||||||| Sbjct 2405498 AAGGAAACAAAACAATGGAACCAACTTTCGT-------------AATGAGGACATAACTG 2405544 Query 1510 AAAGTAATGATAGGATGTGAACTCAAACCAGAACACAAACAACCTATAATGGACAGATG 1568 || | || ||||| |||||| | || |||||||||| ||||| | | |||||||| Sbjct 2405545 AAGGAAAAAATAGGTTGTGAATTGAATCCAGAACACATTCAACCAACGAAAGACAGATG 2405603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15135684461700