Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Egretta_20garzetta_20[refseq_20GCF_5F000687185.1_202014-05-09] 11,791 sequences; 1,206,501,934 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq460 78.8 3e-11 >seq460 Length=9484215 Score = 78.8 bits (86), Expect = 3e-11 Identities = 161/231 (70%), Gaps = 10/231 (4%) Strand=Plus/Plus Query 1257 TGAATGGCTACGACCCGGCCTACGCGGGATCCATCCTCTACGGCTGGTGTCAGCGCT-CC 1315 ||||||| || ||||| ||||| | ||| ||| || | ||||| ||| || Sbjct 2267068 TGAATGGATATGACCCCGCCTATGTAGGAAGCATATTCGTTAGGTGGTG-CAGAATAACC 2267126 Query 1316 TTCAACAAGAGGAACACCGTCTGGCTCTACGGACCCGCCACGACCGGCAAGACCAACATC 1375 ||||| |||||||||| | ||||| || ||||| |||| ||| | || ||||||||| Sbjct 2267127 TTCAA-AAGAGGAACAAGATATGGCTGTATGGACCTGCCAACACCAGAAA-ACCAACATC 2267184 Query 1376 GCGGAGGCCATCGCCCACAC-TGTGCCCTTTTACGGCTGCGTGAACTGGACCAATGAAAA 1434 || | || || || | ||| |||||| || ||||| || | ||||| || Sbjct 2267185 GCTTAAGCTATATTG-ACTCATGTACCCTTTCACAAATGCGTC----GGTCAAATGAGAA 2267239 Query 1435 CTTTCCCTTTAATGACTGTGTGGACAAAATGCTCATTTGGTGGGAGGAGGG 1485 ||||| ||||| | ||||||||||| | ||||||||||| ||||| Sbjct 2267240 CTTTCTGTTTAACAATACTGTGGACAAAACAGTTATTTGGTGGGAAGAGGG 2267290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14740498760205