Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_003410.1 Length=1952 Score E Sequences producing significant alignments: (Bits) Value seq42 104 3e-19 >seq42 Length=6121031 Score = 104 bits (114), Expect = 3e-19 Identities = 121/161 (75%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 351 ACCGGAGTGACCTTGCCGGAGCTGTTGCCGCCGTGAAGGCCGGAAGGAGAATGGTGGATA 410 ||||||||| ||| | ||||||| ||||||| |||||||||||| | ||||| || Sbjct 4240310 ACCGGAGTGGCCTCACGGGAGCTGCTGCCGCCATGAAGGCCGGAACTAAAATGGCCGAAC 4240369 Query 411 TCGCGCGAGAGTTCAGCGAGATCTACGTCAAGTATGGGCGTGGTCTGAGGGATTTGGCCC 470 | |||||||||||| ||| ||||||||||| ||||||| || || ||| || | Sbjct 4240370 TTGCGCGAGAGTTC-CCGAAGCCTACGTCAAGT-GGGGCGTGACCTCAGAGATCTGAGAC 4240427 Query 471 TGATGATTGGACAGAAACCCCGTGACTTCAAGACGGAAGTC 511 | ||||||| ||| |||| || | || || || |||||| Sbjct 4240428 TCCTGATTGGCCAGCAACCACGCAATTTAAAAACTGAAGTC 4240468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6135823690332