Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_008375.1 Length=1898 Score E Sequences producing significant alignments: (Bits) Value seq42 104 3e-19 >seq42 Length=6121031 Score = 104 bits (114), Expect = 3e-19 Identities = 134/182 (74%), Gaps = 5/182 (3%) Strand=Plus/Plus Query 337 TGGGCATGCCGGTGGA---AGGGAACCGTAGCGATCTCTCCGGAGCTGTTGCCGCCGTGA 393 |||| || || |||| |||| |||| || | ||| | ||||||| ||||||| ||| Sbjct 4240286 TGGGGATCCCTGTGGGCTGAGGGCACCGGAGTGGCCTCACGGGAGCTGCTGCCGCCATGA 4240345 Query 394 AAGCCGGAAGTCGAATGGTGGATATCGCGCGAGAGTTCAGTGAAGTCTACGTCAAGTATG 453 | ||||||| | ||||| || | |||||||||||| |||| ||||||||||| | Sbjct 4240346 AGGCCGGAACTAAAATGGCCGAACTTGCGCGAGAGTTC-CCGAAGCCTACGTCAAGT-GG 4240403 Query 454 GGCGTGGCTTACGTGAACTGGCGCTTCTGATTGGACAGAAACCGCGAGATTTCAAAACCG 513 |||||| | | | || ||| || |||||||| ||| |||| || |||| ||||| | Sbjct 4240404 GGCGTGACCTCAGAGATCTGAGACTCCTGATTGGCCAGCAACCACGCAATTTAAAAACTG 4240463 Query 514 AA 515 || Sbjct 4240464 AA 4240465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5963073701136