Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geospiza_20fortis_20[refseq_20GCF_5F000277835.1_202012-07-25] 27,239 sequences; 1,065,292,181 total letters Query= NC_008521.1 Length=2035 Score E Sequences producing significant alignments: (Bits) Value seq42 114 2e-22 >seq42 Length=6121031 Score = 114 bits (126), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 471 GAGTGATCTTGCGGGAGCTGTTGCCGCTGTGAAACGCGGAAGTCAAATGAGTGAAATCGC 530 ||||| || ||||||||| |||||| |||| ||||| | ||||| ||| | || Sbjct 4240314 GAGTGGCCTCACGGGAGCTGCTGCCGCCATGAAGGCCGGAACTAAAATGGCCGAACTTGC 4240373 Query 531 GCGAGAGTTCAGTGAAGTCTACGTCAAGTATGGGCGGGGCCTCCGTGATCTCCGGTTGCT 590 |||||||||| |||| ||||||||||| ||||| | |||| | ||||| | | || Sbjct 4240374 GCGAGAGTTCCC-GAAGCCTACGTCAAGTG-GGGCGTGACCTCAGAGATCTGAGACTCCT 4240431 Query 591 GATTGGTTGCCCGCCCCGCGATTTCAAAACAGAAGTCATCGTTCTGATTGGCCCACCTGG 650 |||||| | || ||| |||| ||||| |||||| ||| |||||||||||||| | Sbjct 4240432 GATTGGCCAGCAACCACGCAATTTAAAAACTGAAGTCTGCGTGCTGATTGGCCCACCAGA 4240491 Query 651 CTGTGGCAAG 660 || |||||| Sbjct 4240492 GTGAGGCAAG 4240501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6401346821874