Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_001729.1 Length=4726 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 2e-13 >seq1 Length=64048162 Score = 86.0 bits (94), Expect = 2e-13 Identities = 205/306 (67%), Gaps = 7/306 (2%) Strand=Plus/Plus Query 2829 TGGCGCACCAATGGCAGACAATAACGAGGGTGCCGATGGAGTGGGTAATTCCTCAGGAAA 2888 ||| | |||||||| |||| | | ||||| || ||| | ||||||||| |||| Sbjct 57516300 TGGGGTACCAATGGGCAACAACACACAAGGTGCTGACAGAGAGAGTAATTCCTTGGGAAG 57516359 Query 2889 TTGGCATTGCGATTCCCAATGGCTGGGCGACAGAGTCATCACCACCAGCACCAGAACCTG 2948 ||| |||||||| | | | || | ||||||||||| | ||| |||| | Sbjct 57516360 GCGGCGCTGCGATTCTGAGTAATTTGG--AAAGAGTCATCACGAAATCCACTTGAACTCG 57516417 Query 2949 GGCCCTGCCCACTTACAACAACCATCTCTACAAGCAAATCTCCAGCCAATCAGGAGCTTC 3008 | | |||| |||||||| | ||||||||| || | | || |||| | Sbjct 57516418 TGTCTTGCCTGACTACAACAATCCTCTCTACAAATCCATTGCTGG---ATGAGGACCAGA 57516474 Query 3009 AAACGACAACCACTACTTTGGCTACAGCACCCCTTGGGGGTATTTTGACTTTAACAGATT 3068 || ||||| || | ||| | || ||| | ||||| ||||||||||||||| |||| Sbjct 57516475 CAATAACAACTCCTGTTCTGGATTCACCACACTGTGGGGATATTTTGACTTTAACTGATT 57516534 Query 3069 CCACTGCCAC-TTCTCACCACGTGACTGGCAGCGACTCATTAACAACAACTGGGGATTCC 3127 | ||| ||| || ||||| | ||||||| | ||||| |||||| || || |||| Sbjct 57516535 CTGCTGTCACTTTAGCACCA-GACACTGGCAACAGCTCATCAACAACCACCGGCCATTCA 57516593 Query 3128 GGCCCA 3133 | |||| Sbjct 57516594 GACCCA 57516599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15008685506725