Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_002077.1 Length=4718 Score E Sequences producing significant alignments: (Bits) Value seq1 102 2e-18 >seq1 Length=64048162 Score = 102 bits (112), Expect = 2e-18 Identities = 118/157 (75%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 4028 ACCTGGCATGGTGTGGCAAGATAGAGACGTGTACCTGCAGGGT-CCCATTTGGGCCAAAA 4086 |||||||||| ||| ||| ||| ||||| |||||| | ||||| | |||||||| Sbjct 57516961 ACCTGGCATGAACTGGATGGATCAAGATGTGTATCTGCAGAGAACCCATATTGGCCAAAA 57517020 Query 4087 TTCCTCACACAGATGGACACTTTCACCCGTCTCCTCTTATGGGCGGCTTTGGACTCAAGA 4146 |||| ||||||||||||| ||||| || | |||| ||||| | ||||| ||||| Sbjct 57517021 TTCCGGACACAGATGGACATTTTCATCC--CAGCTCTCATGGGAGAATTTGGTCTCAAAC 57517078 Query 4147 ACCCGCCTCCTCAGATCCTCATCAAAAACACGCCTGT 4183 | || ||||| || || ||| | |||||||| || || Sbjct 57517079 ATCCCCCTCCACAAATTCTCCTGAAAAACACACCAGT 57517115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14983089794925