Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manacus_20vitellinus_20[refseq_20GCF_5F001715985.1_202016-08-29] 15,315 sequences; 1,213,420,527 total letters Query= NC_006152.1 Length=4642 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 5e-14 >seq1 Length=64048162 Score = 87.8 bits (96), Expect = 5e-14 Identities = 203/301 (67%), Gaps = 10/301 (3%) Strand=Plus/Plus Query 2804 CCATTGGGCGACAATAACCAAGGTGCCGATGGAGTGGGCAATGCCTCGGGAGATTGGCAT 2863 ||| ||||| |||| | |||||||| || ||| | | ||| ||| |||| ||| Sbjct 57516307 CCAATGGGCAACAACACACAAGGTGCTGACAGAGAGAGTAATTCCTTGGGAAGGCGGCGC 57516366 Query 2864 TGCGATTCCACGTGGATGGGGGACAGAGTCGTCACCAAGTCCACCCGAACCTGGGTGCTG 2923 |||||||| || | || | |||||| |||| || ||||| |||| | || || Sbjct 57516367 TGCGATTCTGAGTAATTTGG--AAAGAGTCATCACGAAATCCACTTGAACTCGTGTCTTG 57516424 Query 2924 CCCAGCTACAACAACCACCAGTACCGAGAGATCAAAAGC-GGCTCCGTCGACGGAAGCAA 2982 || ||||||||| | | ||| | ||| | || || | | ||| | ||| Sbjct 57516425 CCTGACTACAACAATCCTCTCTAC----AAATCCATTGCTGGATGAG--GACCAGA-CAA 57516477 Query 2983 CGCCAACGCCTACTTTGGATACAGCACCCCCTGGGGGTACTTTGACTTTAACCGCTTCCA 3042 |||| ||| | ||||| || ||| | ||||| || |||||||||||| | ||| Sbjct 57516478 TAACAACTCCTGTTCTGGATTCACCACACTGTGGGGATATTTTGACTTTAACTGATTCTG 57516537 Query 3043 CAGCCACTGGAGCCCCCGAGACTGGCAAAGACTCATCAACAACTACTGGGGCTTCAGACC 3102 | | |||| ||| || || |||||||| |||||||||||| || || |||||||| Sbjct 57516538 CTGTCACTTTAGCACCAGACACTGGCAACAGCTCATCAACAACCACCGGCCATTCAGACC 57516597 Query 3103 C 3103 | Sbjct 57516598 C 57516598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14739930532825