Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_021862.1 Length=8576 Score E Sequences producing significant alignments: (Bits) Value seq145335 145 4e-31 seq85448 109 3e-20 >seq145335 Length=381 Score = 145 bits (160), Expect = 4e-31 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 5870 TACGAAGTGGACGTGGTGGCGTGGGCCAGTGAGCAGGCGGCGCTGTTGCGGGCCGGCAAG 5929 |||||| || || || || ||||| | ||| ||||| || || ||||| |||| || Sbjct 256 TACGAAACCGATGTTGTCGCCTGGGCAAATGAACAGGCCGCTCTTTTGCGCTCCGGAAAA 197 Query 5930 CTTTCAGACATCGACATTCGGCACATCGCGGAGGAGATTGAGGACGTGGGCAAGAGCGAA 5989 | || || ||||| ||| | ||||| |||||||||||||||||||| |||||||| Sbjct 196 TTGTCTGAGATCGATATTGAAAAGATCGCCGAGGAGATTGAGGACGTGGGGAAGAGCGAG 137 Query 5990 CAGCGGGAGTTGGCAAGCCGCATGGCGGTACTGCTGGCGCATTTGCTCAAGTGGCAATAT 6049 || |||| | || ||||| ||| |||| ||| | || |||||||| || ||| ||||| Sbjct 136 CAAAGGGAACTTGCTAGCCGGATGACGGTGCTGATTGCACATTTGCTTAAATGGAAATAT 77 Query 6050 CAGCCGGGCCGCCGGGGTTCGAGCTGGCAGCGCACGATCAAGGAACAGCG 6099 ||||||| | | || || | |||||| | | ||||| || | ||||| Sbjct 76 CAGCCGGCCAGGCGCGGAACCAGCTGGGAAAGAACGATTAAAGCGCAGCG 27 >seq85448 Length=776 Score = 109 bits (120), Expect = 3e-20 Identities = 169/238 (71%), Gaps = 5/238 (2%) Strand=Plus/Minus Query 6553 GCGCATCATCCACAGATTGCTCAGGGCAAACAGCGT-GTGTAATTGCTGTGTGTTCTTTA 6611 ||||| ||||||||| || || ||||| ||||| ||| | ||| | |||||||| | Sbjct 376 GCGCACCATCCACAGGTTCGATAGCGCAAAAAGCGTAGTG-AGCTGCAGCGTGTTCTTCA 318 Query 6612 TCAAGCCTCGATAGCGCACCCTCAAGTGCCCAAACTGGCGCTTGATGACTCGGAACGGAT 6671 | | || || ||||||||| | || ||||||||||| ||||| || | ||| || | Sbjct 317 TGAGCCCCCGGTAGCGCACCTTGGTGTAGCCAAACTGGCGTTTGATCACCCTGAAGGGGT 258 Query 6672 GTTCCACGCGGGCACGAATGCGCGCCTTGACCCGCTCCAGCTCATCGACGAGCGCACC-- 6729 | ||||| ||| || |||| ||||||| | ||||| || || | |||||| | Sbjct 257 GCTCCACTTTGGCGCGGATGCTGGCCTTGATCTTCTCCACCTGCTCTATCAGCGCATCAA 198 Query 6730 -CGACACGGTGCTCTTGTCCAAGGCGCGGCGTTTGCCCGGGCGTAATGCCACATGCCA 6786 | | | | |||||||| || | ||| ||||||||||| | ||||||||||| Sbjct 197 TGGGCTTGTTCTCCTTGTCCAGCGCCCTGCGCTTGCCCGGGCGCATCGCCACATGCCA 140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27256893432160