Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meleagris_20gallopavo_20[refseq_20GCF_5F000146605.2_202014-11-24] 231,286 sequences; 1,128,339,136 total letters Query= NC_023427.1 Length=2668 Score E Sequences producing significant alignments: (Bits) Value seq214607 87.8 3e-14 >seq214607 Length=276 Score = 87.8 bits (96), Expect = 3e-14 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 401 TGCCATGCCGAACTCTCCCGCTCCGAATCTGCGCAAGACTATGTCTGGAAAGAAGATACT 460 || || || ||| | || | |||||| | || | || ||||| ||||||||||| || Sbjct 263 TGTCACGCTGAATTATCAAGATCCGAAGCAGCCAACGATTATGTATGGAAAGAAGACACC 204 Query 461 CGAGTCGATTGCTCGCAATTCGAATTTGGATCAAAACCTATCCGAAGAAACTCCCGTGTT 520 ||| ||| | | || |||||||| ||| |||| || ||| || |||| | || Sbjct 203 CGAATCGCCGACACTCAGTTCGAATTCGGAGCAAAGCCAATCAGACGAAATAGCAAAGTC 144 Query 521 GACTGGGAATCTGTCTGGTCCGCCGCAAAATCTGGAGACCTCCTTCAGATACCTGCCAAT 580 |||||||| || || ||| ||||||| | || ||| | | ||||||||| | Sbjct 143 GACTGGGAGTCAGTTTGGACCGCCGCCCAGTCCGGACATGTGGAAAGCATACCTGCCCAC 84 Query 581 GTACGAGTGGTTAGTTACCGGACCTTACGTGCTATT 616 ||||| || ||||||| ||||| | || || ||| Sbjct 83 GTACGCGTTACTAGTTACAGGACCATTCGGGCAATT 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 8408086950984