Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nannopterum_20brasilianus_20[genbank_20GCA_5F002174335.1_202017-06- 06] 266,364 sequences; 1,346,185,690 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq38247 161 3e-36 >seq38247 Length=58505 Score = 161 bits (178), Expect = 3e-36 Identities = 106/117 (91%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 2224 ATTTAATGTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTG 2283 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 48516 ATATAAANTGACCGTTTATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTG 48457 Query 2284 ATAAAAGATTGAGTGTGAGGTTATAACGCCGAAGCGG---TAAAAATTTTAATTTTT 2337 ||||||||||||||||||||||||||| |||||| || ||||||||| ||||| Sbjct 48456 ATAAAAGATTGAGTGTGAGGTTATAACACCGAAGGGGGGAAAAAAATTTTTTTTTTT 48400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17073314018260