Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Passer_20domesticus_20[genbank_20GCA_5F001700915.1_202016-08-31] 2,301 sequences; 1,042,720,703 total letters Query= NC_001422.1 Length=5386 Score E Sequences producing significant alignments: (Bits) Value seq1 150 6e-33 >seq1 Length=112674304 Score = 150 bits (166), Expect = 6e-33 Identities = 94/101 (93%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1309 TATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAGCA 1368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57123634 TATTGACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAGCA 57123693 Query 1369 TTTGTTTCAGGGTTATTTGAATATCTATAACAACTATTTTA 1409 |||||||||| || || |||| |||||||||||||||| Sbjct 57123694 TTTGTTTCAGAAATACTTATATATTTATAACAACTATTTTA 57123734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17122769057215