Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_001401.2 Length=4679 Score E Sequences producing significant alignments: (Bits) Value seq39689 145 2e-31 >seq39689 Length=9188 Score = 145 bits (160), Expect = 2e-31 Identities = 221/313 (71%), Gaps = 9/313 (3%) Strand=Plus/Minus Query 1290 TTCGGCAAGAGGAACACCATCTGGCTGTTTGGGCCTGCAACTACCGGGAAGACCAACATC 1349 ||| ||||||| |||||| | ||||||| || |||| || | || |||||||||||| Sbjct 7709 TTCAGCAAGAGAAACACCGTGTGGCTGTACGGACCTGTGACGAAGGGAAAGACCAACATC 7650 Query 1350 GCGGAGGCCATAGCCCA-CACTGTG-------CCCTTCTACGGGTGCGTAAACTGGACCA 1401 || || || | | | || || | |||| | || ||||| |||||||||| Sbjct 7649 GCTGAAGCTGTCTCTTTGCTCTTTGGTGGTCCCGCTTC-ATGGCTGCGTCAACTGGACCA 7591 Query 1402 ATGAGAACTTTCCCTTCAACGACTGTGTCGACAAGATGGTGATCTGGTGGGAGGAGGGGA 1461 | ||||||||||||| || ||||| || || || ||| | || |||||||||||||| | Sbjct 7590 ACGAGAACTTTCCCTGCAGTGACTGCGTGGATAAAATGATTATTTGGTGGGAGGAGGGTA 7531 Query 1462 AGATGACCGCCAAGGTCGTGGAGTCGGCCAAAGCCATTCTCGGAGGAAGCAAGGTGCGCG 1521 | ||||| ||||| |||| || | ||||| || |||| || || |||||| | | Sbjct 7530 AAATGACATCCAAGATCGTCGAAGCTGCCAAGGCTCTTCTGGGTGGCTCTAAGGTGAGGG 7471 Query 1522 TGGACCAGAAATGCAAGTCCTCGGCCCAGATAGACCCGACTCCCGTGATCGTCACCTCCA 1581 ||| || ||||| ||| || | ||||| || || || || || |||| |||| Sbjct 7470 TGGGTCAAAAATGTAAGGGATCCGTGTCAATAGATCCAACGCCAGTCATTATCACATCCA 7411 Query 1582 ACACCAACATGTG 1594 || | ||||||| Sbjct 7410 ACGCAGACATGTG 7398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14850400365720