Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_006147.2 Length=5132 Score E Sequences producing significant alignments: (Bits) Value seq39689 208 2e-50 >seq39689 Length=9188 Score = 208 bits (230), Expect = 2e-50 Identities = 321/452 (71%), Gaps = 11/452 (2%) Strand=Plus/Minus Query 1367 GCAGAAATGCTACTAACAAAAACTGCCACAGACTATTTGATTGGAAAAGACCCAGTTCTG 1426 ||||||||||| || | |||| || | ||||| |||||||||| || | | | | Sbjct 7865 GCAGAAATGCTCCTGGCCAAAAGGGCTCCCGACTACCTGATTGGAAAGGAAG-ACTACGG 7807 Query 1427 -GACATTACTAAAAATCGGATCTATCAAATTCTGAAGTTGAATAACTATAACCCTCAATA 1485 ||||| || |||| ||||||| | || |||| | ||| |||||| |||| | || Sbjct 7806 CGACATCACCCAAAACAGGATCTACAAGATACTGACTTGGAACAACTATGACCCCCCCTA 7747 Query 1486 TGTAGGGAGCGTCCTATGCGGATGGGTGAAAAGAGAATTCAACAAAAGAAATGCCATATG 1545 ||| || ||| || | ||| || | |||||| |||| ||| ||||| || | || Sbjct 7746 TGTGGGAAGCATCTTTGTCGGCTGCTGCAGAAGAGACTTCAGCAAGAGAAACACCGTGTG 7687 Query 1546 GCTCTACGGACCTGCGACCACCGGAAAGACCAACATAGCCGAGGCTAT-----TGCCCAT 1600 ||| |||||||||| ||| | |||||||||||||| || || ||| | ||| | | Sbjct 7686 GCTGTACGGACCTGTGACGAAGGGAAAGACCAACATCGCTGAAGCTGTCTCTTTGCTCTT 7627 Query 1601 --GCTGTACC-CTTCTATGGCTGTGTTAACTGGACTAATGAGAACTTCCCATTTAATGAC 1657 | || || |||| ||||||| || |||||||| || |||||||| || | | |||| Sbjct 7626 TGGTGGTCCCGCTTC-ATGGCTGCGTCAACTGGACCAACGAGAACTTTCCCTGCAGTGAC 7568 Query 1658 TGCGTTGATAAAATGCTTATATGGTGGGAGGAGGGAAAAATGACCAATAAAGTAGTGGAA 1717 ||||| ||||||||| |||| |||||||||||||| |||||||| || | || ||| Sbjct 7567 TGCGTGGATAAAATGATTATTTGGTGGGAGGAGGGTAAAATGACATCCAAGATCGTCGAA 7508 Query 1718 TCCGCAAAAGCGATACTgggggggTCTGCTGTACGAGTTGATCAAAAGTGTAAGGGGTCT 1777 | || || || | ||||| || ||| || | || | |||||| |||||||| || Sbjct 7507 GCTGCCAAGGCTCTTCTGGGTGGCTCTAAGGTGAGGGTGGGTCAAAAATGTAAGGGATCC 7448 Query 1778 GTTTGTATTGAACCTACTCCTGTAATAATTAC 1809 || | || || || || || || || || || Sbjct 7447 GTGTCAATAGATCCAACGCCAGTCATTATCAC 7416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 16298985931110