Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_014468.1 Length=4286 Score E Sequences producing significant alignments: (Bits) Value seq39689 183 8e-43 >seq39689 Length=9188 Score = 183 bits (202), Expect = 8e-43 Identities = 233/316 (74%), Gaps = 11/316 (3%) Strand=Plus/Minus Query 1090 GAACGGCTACGACCCCGCCTACGCGGGCAGCGTGCTGCTCGGCTGGTGCCGCACCGGCTT 1149 |||| ||| |||||| |||| | ||| ||| | | ||||||| ||| | | | ||| Sbjct 7767 GAACAACTATGACCCCCCCTATGTGGGAAGCATCTTTGTCGGCTGCTGCAGAAGAGACTT 7708 Query 1150 CGGCAAGCGCAACACCGTCTGGCTCTTCGGGCCGGCCACGACCGGCAAGACGAACCTCGC 1209 | ||||| | |||||||| ||||| | ||| || | |||| || ||||| ||| |||| Sbjct 7707 CAGCAAGAGAAACACCGTGTGGCTGTACGGACCTGTGACGAAGGGAAAGACCAACATCGC 7648 Query 1210 CGAGGCCATCA----GCCACTCGGTG----CCCTTCTACGGCTGCGTCAACTGGACCAAC 1261 || || || || | |||| | |||| | ||||||||||||||||||||| Sbjct 7647 TGAAGCTGTCTCTTTGCTCTTTGGTGGTCCCGCTTC-ATGGCTGCGTCAACTGGACCAAC 7589 Query 1262 GAGAACTTCCCCTTCAACGACTGCGTGGACAAGATGATCATCTGGTGGGAGGAGGGCAAG 1321 |||||||| |||| || ||||||||||| || ||||| || |||||||||||||| || Sbjct 7588 GAGAACTTTCCCTGCAGTGACTGCGTGGATAAAATGATTATTTGGTGGGAGGAGGGTAAA 7529 Query 1322 ATGACGTCCAAGGTCGTCGAGAGC-GCCAAGGCCATCCTCGGCGGCAGCAAGGTGCGCGT 1380 ||||| |||||| ||||||| ||| |||||||| | || || ||| |||||| | || Sbjct 7528 ATGACATCCAAGATCGTCGA-AGCTGCCAAGGCTCTTCTGGGTGGCTCTAAGGTGAGGGT 7470 Query 1381 CGACCAGAAGTGCAAG 1396 | || || || ||| Sbjct 7469 GGGTCAAAAATGTAAG 7454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 13593680438130