Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pelecanus_20crispus_20[refseq_20GCF_5F000687375.1_202014-05-09] 63,982 sequences; 1,160,924,693 total letters Query= NC_027429.1 Length=4590 Score E Sequences producing significant alignments: (Bits) Value seq39689 82.4 2e-12 >seq39689 Length=9188 Score = 82.4 bits (90), Expect = 2e-12 Identities = 167/240 (70%), Gaps = 11/240 (5%) Strand=Plus/Minus Query 1306 CATCTTTAACGGTTGGTTGAACAAG-GAATACGGAAAAAGGAATACCATCTGGCTCTACG 1364 ||||||| ||| || | | | ||| || | | | || || || ||| | ||||| |||| Sbjct 7737 CATCTTTGTCGGCTGCT-GCAGAAGAGACTTCAGCAAGAGAAACACCGTGTGGCTGTACG 7679 Query 1365 GACCAGCTACCACCGGAAAGACTATTATAGCGCAAGCTATAGCC---CACGGTGCTGT-- 1419 |||| | || | |||||||| | || || ||||| | | | | || || Sbjct 7678 GACCTGTGACGAAGGGAAAGACCAACATCGCTGAAGCTGTCTCTTTGCTCTTTGGTGGTC 7619 Query 1420 CCTCTT--TGGAGGAGTCAATTGGACTAATGAAAACTTTCCCTTTTGTAATTGTCCTGG- 1476 || ||| ||| | ||||| ||||| || || |||||||||| || | || | ||| Sbjct 7618 CCGCTTCATGGCTGCGTCAACTGGACCAACGAGAACTTTCCCTGCAGTGACTG-CGTGGA 7560 Query 1477 TAAACTGTTGATATGGTGGGAAGAGGGTAAAATGACACAAAAGATGGTCGAAACCGCCAA 1536 |||| || | || |||||||| ||||||||||||||| ||||| |||||| | ||||| Sbjct 7559 TAAAATGATTATTTGGTGGGAGGAGGGTAAAATGACATCCAAGATCGTCGAAGCTGCCAA 7500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 14565799669650