Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_003287.2 Length=6407 Score E Sequences producing significant alignments: (Bits) Value seq169021 210 9e-51 seq170193 114 5e-22 >seq169021 Length=202 Score = 210 bits (232), Expect = 9e-51 Identities = 118/119 (99%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 3030 TCTGATATTAGCGCTCAATTACCCTCTGACTTTGTTCAGGGTGTTCAGTTAATTCTCCCG 3089 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TCTGATATTAGCGCTCAATTACCCTCTGACTTTGTTCAGGGTGTTCAGTTAATTCTCCCG 60 Query 3090 TCTAATGCGCTTCCCTGTTTTTATGTTATTCTCTCTGTAAAGGCTGCTATTTTCATTTT 3148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 61 TCTAATGCGCTTCCCTGTTTTTATGTTATTCTCTCTGTAAAGGCTGCTATTTTCATCTT 119 >seq170193 Length=81 Score = 114 bits (126), Expect = 5e-22 Identities = 63/63 (100%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1021 TGTACACCGTTCATCTGTCCTCTTTCAAAGTTGGTCAGTTCGGTTCCCTTATGATTGACC 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TGTACACCGTTCATCTGTCCTCTTTCAAAGTTGGTCAGTTCGGTTCCCTTATGATTGACC 60 Query 1081 GTC 1083 ||| Sbjct 61 GTC 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20317384033600