Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_008375.1 Length=1898 Score E Sequences producing significant alignments: (Bits) Value seq20 113 5e-22 >seq20 Length=12106520 Score = 113 bits (124), Expect = 5e-22 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 352 AAGGGAACCGTAGCGATCTCTCCGGAGCTGTTGCCGCCGTGAAAGCCGGAAGTCGAATGG 411 ||||| ||| ||||| ||| ||||||| ||| ||| |||| ||| ||| | ||||| Sbjct 6117272 AAGGGCACCAGAGCGACCTCATGGGAGCTGCTGCTGCCATGAAGGCCAGAACTAAAATGG 6117213 Query 412 TGGATATCGCGCGAGAGTTCAGTGAAGTCTACGTCAAGTATGGGCGTGGCTTACGTGAAC 471 || || |||||||||||| ||||| ||||||||||| ||||||||| | | || | Sbjct 6117212 CCGAAATGGCGCGAGAGTTCCCTGAAGCCTACGTCAAGTGGGGGCGTGGCCTTAGAGATC 6117153 Query 472 TGGCGCTTCTGATTGGACAGAAACCGCGAGATTTCAAAACCGAATTTATCGTTGTCACCG 531 || || |||||||| ||| ||| ||| |||| |||| ||| | ||| | | | Sbjct 6117152 TGAGACTCCTGATTGGCCAGCAACTGCGCAATTTTGAAACTGAAGTCTACGTGCTGATTG 6117093 Query 532 GTCCGTCGGGCGTGGGCAAGAGCCG 556 | || | || | ||||||||||| Sbjct 6117092 GCCCACCAGGTGGAGGCAAGAGCCG 6117068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5945508345600