Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_025824.1 Length=6408 Score E Sequences producing significant alignments: (Bits) Value seq169021 197 6e-47 seq170193 100 1e-17 >seq169021 Length=202 Score = 197 bits (218), Expect = 6e-47 Identities = 115/119 (97%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 3030 TCTGATATTAGCGCACAATTACCCTCTGATTTTGTTCAGGGCGTTCAGTTAATTCTCCCG 3089 |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1 TCTGATATTAGCGCTCAATTACCCTCTGACTTTGTTCAGGGTGTTCAGTTAATTCTCCCG 60 Query 3090 TCTAATGCGCTTCCCTGTTTTTATGTTATTCTCTCTGTAAAGGCTGCTATTTTCATTTT 3148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 61 TCTAATGCGCTTCCCTGTTTTTATGTTATTCTCTCTGTAAAGGCTGCTATTTTCATCTT 119 >seq170193 Length=81 Score = 100 bits (110), Expect = 1e-17 Identities = 60/63 (95%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1021 TGTACACCGTGCATCTGTCCTCGTTCAAAGTTGGTCAGTTCGGTTCTCTTATGATTGACC 1080 |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 1 TGTACACCGTTCATCTGTCCTCTTTCAAAGTTGGTCAGTTCGGTTCCCTTATGATTGACC 60 Query 1081 GTC 1083 ||| Sbjct 61 GTC 63 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 20320573075200