Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_028045.1 Length=1767 Score E Sequences producing significant alignments: (Bits) Value seq5138 96.9 4e-17 >seq5138 Length=6151 Score = 96.9 bits (106), Expect = 4e-17 Identities = 138/193 (72%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 602 GGGC-AGTGGTGGGATGGGTATAATGGAGAGGATATTGTTGTATTAGATGATTTTTATGG 660 |||| ||||||||||||| || || | ||||| || || || | |||||||||||||| Sbjct 5209 GGGCGAGTGGTGGGATGGATACGATCGGGAGGAGATCGTGGTGATTGATGATTTTTATGG 5150 Query 661 ATGGGTCCCCTATGATGAGCTTCTGCGAATTGGGGACCGCTACCCCCTGAAAGTACAGGT 720 ||| | ||||| |||| | ||| || | ||||| ||||| | || |||| || Sbjct 5149 TTGGCTGCCCTACTGTGAGTTACTGAGACTGACTGACCGTTACCCGCATAAGGTACCAGT 5090 Query 721 GAAGGGGGCCTTTGTAGAGTTCACCTCTAAGATGCTTGTTATCACAAGCAATAAAAGGCC 780 ||||||||| | ||| ||||| | || | || ||||||| ||||| || || Sbjct 5089 GAAGGGGGCTTATGTGGAGTTTGTGAGCAGGAAGATTATTATCACCAGCAACAAGTACCC 5030 Query 781 TGAGGAGTGGTAT 793 | | ||||||||| Sbjct 5029 TCAAGAGTGGTAT 5017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5540738110092