Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_003054.1 Length=1821 Score E Sequences producing significant alignments: (Bits) Value seq8418 100 3e-18 >seq8418 Length=44511 Score = 100 bits (110), Expect = 3e-18 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 623 GTGAAAAGTATTATAAATCTCGCGGGAAGTGGTGGGATGGCTATAATGGGCAGGATGTGG 682 |||| || |||| ||| | || || ||||||||||| || |||| ||||| || | | Sbjct 36106 GTGACAAATATTGGAAACCCCGTGGAAAGTGGTGGGACGGGTATACAGGGCAAGAGATTG 36165 Query 683 TTGTCATGGATGATTTTTATGGGTGGCTGCCTTACGATGACCTTTTAAGGATCTGTGATC 742 || | |||||||||||||||||||||| || | ||||| | ||||| || |||||| Sbjct 36166 TTATATTGGATGATTTTTATGGGTGGCTACCATTTGATGAATTGTTAAGAATTTGTGATA 36225 Query 743 GCTATCCTTTAAGGGTAGAGTACAAGGGAGGTA 775 | || |||| || || ||| ||||| |||| Sbjct 36226 GATACCCTTATAGAGTTGAGACCAAGGATGGTA 36258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5707094880456