Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_005148.1 Length=1768 Score E Sequences producing significant alignments: (Bits) Value seq15089 93.3 5e-16 >seq15089 Length=55194 Score = 93.3 bits (102), Expect = 5e-16 Identities = 113/151 (75%), Gaps = 5/151 (3%) Strand=Plus/Minus Query 630 TACTGGAAACCACCTAGAAACAAGTGGTGGGACGGTTACCATGGTGAAGAAGTGGTTGTT 689 ||||||||||||| |||| ||||||||| || ||| ||| |||| | || | | Sbjct 21799 TACTGGAAACCACGGGGAAA---GTGGTGGGATGGATACACTGGACAAGAGATTGT-GAT 21744 Query 690 ATTG-ATGACTTTTATGGCTGGCTGCCGTGGGATGATCTACTGAGATTGTGTGATCGATA 748 |||| |||| | |||||| ||||| || | ||||| | | |||||||||||| |||| Sbjct 21743 ATTGGATGATTATTATGGTTGGCTCCCCTTTGATGAATTGTTAAGATTGTGTGATAGATA 21684 Query 749 TCCATTGACTGTAGAGACTAAAGGTGGAACT 779 ||| | | || ||||||||||| |||||| Sbjct 21683 TCCCTACAGAGTGGAGACTAAAGGGGGAACT 21653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5537830174992