Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crotalus_20horridus_20[genbank_20GCA_5F001625485.1_202016-04-21] 186,068 sequences; 1,520,334,138 total letters Query= NC_015399.1 Length=1957 Score E Sequences producing significant alignments: (Bits) Value seq15089 104 3e-19 >seq15089 Length=55194 Score = 104 bits (114), Expect = 3e-19 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 662 GTACTATAAGCCTCGCGGTATGTGGTGGGATGGATACGATGGACAAGAGAATGTAATTGT 721 ||||| || || || || | |||||||||||||||| ||||||||||| ||| || | Sbjct 21800 GTACTGGAAACCACGGGGAAAGTGGTGGGATGGATACACTGGACAAGAGATTGTGATATT 21741 Query 722 CGATGACTTTTACGGCTGGATGCCATGTGATGAACTGTTGAGAGTGTTTGATCGATATCC 781 ||||| | ||| || ||| | || | ||||||| |||| ||| ||| |||| ||||||| Sbjct 21740 GGATGATTATTATGGTTGGCTCCCCTTTGATGAATTGTTAAGATTGTGTGATAGATATCC 21681 Query 782 TTGTAAAGTACCGGTAAAAGGAGCCTATGTGGAATTTGTGTCAACTAATATATATGTGAC 841 | | ||| | ||||| | | | || |||||||| | | || ||| | || Sbjct 21680 CTACAGAGTGGAGACTAAAGGGGGAACTATTGAGTTTGTGTCCAAGACCATTTATATCAC 21621 Query 842 GTCTAACAAGCATGTGTGGCAATGGTATAA 871 || ||||| | ||| | |||||||||| Sbjct 21620 TTCAAACAAACCTGTTAAGGAATGGTATAA 21591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6141434502024